BAC Information

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BAC

Clone NameB6Ng01-065D17
Chromosome13 (Build37)
Map Location 11,712,630 - 11,863,019
singlet/doubletdoublet
Overlap geneRyr2
Upstream geneLOC100039648, Zp4
Downstream geneLOC100039678, Mtr, LOC100039826, Actn2, EG432725, Heatr1, LOC546246, Lgals8, LOC100039900, Edaradd, Ero1lb, LOC664862, EG238507, LOC100039744, EG630757
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065D17.bB6Ng01-065D17.g
ACCDH884769DH884770
length522839
definitionDH884769|Mus musculus domesticus DNA, BAC clone: B6Ng01-065D17, 5' end.DH884770|Mus musculus domesticus DNA, BAC clone: B6Ng01-065D17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,862,492 - 11,863,019)(11,712,630 - 11,713,468)
sequence
tatcaacaggtagactcttgctaatgacagtccacagactctgactccat
gtggctcccagggttctagactgggaaactgagaagggaagactcagcac
caggtcagaagggagaggaacaggccacggtgtttgaagctgagttgtgg
ggaaggcccctgaggtgttgcttgttttgagagagagtagctttggaatg
tcactgttcctacaaacaacccatgtgacttgttttcagatagcagtgaa
cggtcagaccttcactataaaccatgggaggaaggggagaaagaagagac
aaaacagaattccttgtacctgtccagccctttagcttattttgtttttc
ctacctgtttgagataaaggctcactgtgcagtgccgtcaaggatagcat
tgaagttgaaatcctcatgtttcaatttcccaagtcctgagattataggc
atatgtctccaaacttagatgggttttccgtactgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtga
gaattctttcctgcctctgcttaagtatttagacacataagctttcatgt
ggatatttcataggtttccagaaaaagttggttctgtgagcagcatcagc
aatggagagctggagtcgtgtgtgtcgtccgtccgtgtcccccccccccc
ccccgctgatgtggtagaacctcagtttttaccacctctgtcttggaatc
tgaagtagagcaggaaccattggccaggttggtgactcctcttcattctc
agagcagtgttcagagtccaggatcaagatttgggtaaatcatgaattta
aaacatgctaaagcaatgcctgggtccgtctcgtcattgaattgttacag
agcatcacaaaattatgtctgcagggtttcaggtaaaaagtataggtagg
agttttcaactttatgatgtgcagtatggacacacattccatagaatgcc
taccttggatttgagatttttattcttttcttgggatggctatgtgcggt
gtgatgttctcacacaaagctagggggccacctctggtaccagagggcac
atgtctcagcctctaaccacacactaggttgtggagtcatgtcatcccat
agggcaagggttgtaaatggtgccatttcaatgtgtaataaaatttattt
ttaaaaaccctcccactttgtaggtgggaacaactgtacatacgagatga
cagaggctcattcaagggtttagcggaagacactttttggcaaataaaag
tcaagtgctctgtgtcaggaaaggaagaccattaagggaaagggagaggg
agaggacaggagggctgaatgggaaagctaaacactatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_11862492_11863019
seq2: B6Ng01-065D17.b_47_574 (reverse)

seq1  TCACACACACACACACACACACACACACACACACACACAGTACGGAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACACACACACACACACACACACACACACACACACAGTACGGAAAAC  50

seq1  CCATCTAAGTTTGGAGACATATGCCTATAATCTCAGGACTTGGGAAATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTAAGTTTGGAGACATATGCCTATAATCTCAGGACTTGGGAAATTG  100

seq1  AAACATGAGGATTTCAACTTCAATGCTATCCTTGACGGCACTGCACAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGAGGATTTCAACTTCAATGCTATCCTTGACGGCACTGCACAGTG  150

seq1  AGCCTTTATCTCAAACAGGTAGGAAAAACAAAATAAGCTAAAGGGCTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTATCTCAAACAGGTAGGAAAAACAAAATAAGCTAAAGGGCTGGA  200

seq1  CAGGTACAAGGAATTCTGTTTTGTCTCTTCTTTCTCCCCTTCCTCCCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTACAAGGAATTCTGTTTTGTCTCTTCTTTCTCCCCTTCCTCCCATG  250

seq1  GTTTATAGTGAAGGTCTGACCGTTCACTGCTATCTGAAAACAAGTCACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATAGTGAAGGTCTGACCGTTCACTGCTATCTGAAAACAAGTCACAT  300

seq1  GGGTTGTTTGTAGGAACAGTGACATTCCAAAGCTACTCTCTCTCAAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGTTTGTAGGAACAGTGACATTCCAAAGCTACTCTCTCTCAAAACA  350

seq1  AGCAACACCTCAGGGGCCTTCCCCACAACTCAGCTTCAAACACCGTGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACACCTCAGGGGCCTTCCCCACAACTCAGCTTCAAACACCGTGGCC  400

seq1  TGTTCCTCTCCCTTCTGACCTGGTGCTGAGTCTTCCCTTCTCAGTTTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTCTCCCTTCTGACCTGGTGCTGAGTCTTCCCTTCTCAGTTTCCC  450

seq1  AGTCTAGAACCCTGGGAGCCACATGGAGTCAGAGTCTGTGGACTGTCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAGAACCCTGGGAGCCACATGGAGTCAGAGTCTGTGGACTGTCATT  500

seq1  AGCAAGAGTCTACCTGTTGATAGAATTC  528
      ||||||||||||||||||||||||||||
seq2  AGCAAGAGTCTACCTGTTGATAGAATTC  528

seq1: chr13_11712630_11713468
seq2: B6Ng01-065D17.g_71_909

seq1  GAATTCTTTCCTGCCTCTGCTTAAGTATTTAGACACATAAGCTTTCATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCTGCCTCTGCTTAAGTATTTAGACACATAAGCTTTCATGT  50

seq1  GGATATTTCATAGGTTTCCAGAAAAAGTTGGTTCTGTGAGCAGCATCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTTCATAGGTTTCCAGAAAAAGTTGGTTCTGTGAGCAGCATCAGC  100

seq1  AATGGAGAGCTGGAGTCGTGTGTGTCGTCCGTCCGTGTCCCCCCCCCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGAGCTGGAGTCGTGTGTGTCGTCCGTCCGTGTCCCCCCCCCCCC  150

seq1  CCCCGCTGATGTGGTAGAACCTCAGTTTTTACCACCTCTGTCTTGGAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGCTGATGTGGTAGAACCTCAGTTTTTACCACCTCTGTCTTGGAATC  200

seq1  TGAAGTAGAGCAGGAACCATTGGCCAGGTTGGTGACTCCTCTTCATTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTAGAGCAGGAACCATTGGCCAGGTTGGTGACTCCTCTTCATTCTC  250

seq1  AGAGCAGTGTTCAGAGTCCAGGATCAAGATTTGGGTAAATCATGAATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGTGTTCAGAGTCCAGGATCAAGATTTGGGTAAATCATGAATTTA  300

seq1  AAACATGCTAAAGCAATGCCTGGGTCCGTCTCGTCATTGAATTGTTACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGCTAAAGCAATGCCTGGGTCCGTCTCGTCATTGAATTGTTACAG  350

seq1  AGCATCACAAAATTATGTCTGCAGGGTTTCAGGTAAAAAGTATAGGTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCACAAAATTATGTCTGCAGGGTTTCAGGTAAAAAGTATAGGTAGG  400

seq1  AGTTTTCAACTTTATGATGTGCAGTATGGACACACATTCCATAGAATGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCAACTTTATGATGTGCAGTATGGACACACATTCCATAGAATGCC  450

seq1  TACCTTGGATTTGAGATTTTTATTCTTTTCTTGGGATGGCTATGTGCGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTGGATTTGAGATTTTTATTCTTTTCTTGGGATGGCTATGTGCGGT  500

seq1  GTGATGTTCTCACACAAAGCTAGGGGGCCACCTCTGGTACCAGAGGGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTTCTCACACAAAGCTAGGGGGCCACCTCTGGTACCAGAGGGCAC  550

seq1  ATGTCTCAGCCTCTAACCACACACTAGGTTGTGGAGTCATGTCATCCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTCAGCCTCTAACCACACACTAGGTTGTGGAGTCATGTCATCCCAT  600

seq1  AGGGCAAGGGTTGTAAATGGTGCCATTTCAATGTGTAAT-AAATTTATTT  649
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGGGCAAGGGTTGTAAATGGTGCCATTTCAATGTGTAATAAAATTTATTT  650

seq1  TTAAAAACCCTCCCAC-TTGTAGGTGGGAACAACTGTACATACGAGATGA  698
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTAAAAACCCTCCCACTTTGTAGGTGGGAACAACTGTACATACGAGATGA  700

seq1  CAGAGGCTCACTCAAGGGTTTAGCGGAAGACACTTTTTGGCAAAATAAAA  748
      |||||||||| |||||||||||||||||||||||||||||| ||||||||
seq2  CAGAGGCTCATTCAAGGGTTTAGCGGAAGACACTTTTTGGC-AAATAAAA  749

seq1  GTCAAGTGCTCTGTGTCAAGGAAAGGAAGACCATTAGAGGGAAGGGGAGA  798
      ||||||||||||||||| |||||||||||||||||| |||||| ||||||
seq2  GTCAAGTGCTCTGTGTC-AGGAAAGGAAGACCATTA-AGGGAAAGGGAGA  797

seq1  GGGAGAGGACAGGAGGGGCTG-ATGGGAAGGC-AAACACTATC  839
      |||||||||||||| |||||| ||||||| || ||||||||||
seq2  GGGAGAGGACAGGA-GGGCTGAATGGGAAAGCTAAACACTATC  839