BAC Information

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BAC

Clone NameB6Ng01-069A20
Chromosome13 (Build37)
Map Location 76,259,745 - 76,405,593
singlet/doubletdoublet
Overlap geneAK129128, Gm276
Upstream genePcsk1, LOC672443, LOC666764, LOC100042606, LOC100042986, Ell2, LOC666786, Glrx, Rhobtb3, LOC666553, LOC622313, Spata9, Rfesd, LOC100043008, Gpr150, Arsk
Downstream geneMctp1, LOC666603, EG666607, Ankrd32, 2210408I21Rik, LOC631139
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069A20.bB6Ng01-069A20.g
ACCDH887468DH887469
length1,141307
definitionDH887468|Mus musculus domesticus DNA, BAC clone: B6Ng01-069A20, 5' end.DH887469|Mus musculus domesticus DNA, BAC clone: B6Ng01-069A20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,404,446 - 76,405,593)(76,259,745 - 76,260,052)
sequence
gaattctatgttttaggggtggcgtttcagaagcaccgaaactaggttgg
agctgtcttctcttcatggaagggctgttgtctagactcccattaatagc
tgcaaagcaatttcatcatggcccttgcactattgctcttaactctggat
ttgagaaatgtagttcttttttttttttttcacttgcaaaaatgagaagt
tcctggtatctactacagcttcaaaataatccagattctgtaatatgcat
tctaaccacaggagaactgtgaccaaataaacaaaatgcatcaaggagaa
gaagcataaatagcagtctgatttttaaagtcatctttgacaatgaaaat
tatgaaattttaaattctgctgttctcagccaaattaatttaattcattt
cagcactccggtgtttctgttctttccacgctttgcatatcctgcaattg
ctcacatcagtatggatttactatttgggagggtggagatccaaacagga
gagttgtttccacttgtctgcatgtgacaaatagaaattagaaatcatcg
ctctgtcctaggagataattccagttggaaggcagagtgagcccgttaca
ggagatacgagaataaactcctcgggaaggataacaaccttaaaatttaa
aacattttcttgggtttcattgcaacaaaaggttaactacatttatatat
gtactttatatgtatatgtctatgagtatgtgtgtcactgtgcacatgca
gaggccaaagggcctttaggagttcggttctgtcctttgaatgtgtgggc
tccaggtcaccaggcgtggcagcaaacacctttatgtgctttatgatctc
atccagttgcatttcagcaaagttaagaccaagactggccgctcccagca
ctcgctcctaccccaattcccactcacagtcccacccctcaatgcctaag
tcaggtgcctattttatttatactgagatcctatggtgctcttcccttct
attctctcccactgcagctcaaacaaagagctcttggaacttatgctttt
aataccctgaagtagtctatcatgatgcatccacctatcaattttgatga
acgagctggaagaaataattggaaagaagccaggtggtggg
tcctgatcatgaattcagtttcagagtgtaatgtaaagtagttttacttc
cagtgtttaaacgtgttaatgagtcattaatgttttctgtatttgctgct
ttatttatgattttagttccttaagtcaggacttggtaaattatgtatga
agtatgacatttatatatctagatattggtagttgtgtgtatatatgtat
ttgtacacatacatgtatatatatatatacacacacgcatatatgtatat
atatgtatgtgtgtgtgtgtatgtatgtatatatatatgtgtgtgtatat
atatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_76404446_76405593
seq2: B6Ng01-069A20.b_46_1186 (reverse)

seq1  CCCACCACCTGCCTTCCTCTCCATTATATCTGTCAGCTACAGTTCATCAA  50
      ||||||||||| |||| |  | ||||| |||  |||||   ||||||| |
seq2  CCCACCACCTGGCTTCTTTCCAATTATTTCTTCCAGCT--CGTTCATC-A  47

seq1  AAATTGATA-GTTGATGCATCATGATAGACTACTTCAGGGTTATTAAAAA  99
      ||||||||| || ||||||||||||||||||||||||||| |||| ||||
seq2  AAATTGATAGGTGGATGCATCATGATAGACTACTTCAGGG-TATT-AAAA  95

seq1  GCATAAGGTTCCAGAGCCTCTGTGTTTGAGGCTGCAGTGTGAGAGAATAG  149
      ||||||| | | |||| |||| ||||||| ||||||||| ||||||||||
seq2  GCATAAGTTCCAAGAG-CTCTTTGTTTGA-GCTGCAGTGGGAGAGAATAG  143

seq1  AAGGGAAGAGCACCATAGGATCTCAGGTATAAATAAAATAGGCACCTGAC  199
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAGGGAAGAGCACCATAGGATCTCA-GTATAAATAAAATAGGCACCTGAC  192

seq1  TTAGGCATTGAGGGGTGGGACTGTGAGTGGGAATTGGGGTAGGAGCGAGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCATTGAGGGGTGGGACTGTGAGTGGGAATTGGGGTAGGAGCGAGT  242

seq1  GCTGGGAGCGGCCAGTCTTGGTCTTAACTTTGCTGAAATGCAACTGGATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGAGCGGCCAGTCTTGGTCTTAACTTTGCTGAAATGCAACTGGATG  292

seq1  AGATCATTAAGCACATAAAGGTGTTTGCTGCCACGCCTGGTGACCTGGAG  349
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCATAAAGCACATAAAGGTGTTTGCTGCCACGCCTGGTGACCTGGAG  342

seq1  CCCACACATTCAAAGGACAGAACCGAACTCCTAAAGGCCCTTTGGCCTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACATTCAAAGGACAGAACCGAACTCCTAAAGGCCCTTTGGCCTCT  392

seq1  GCATGTGCACAGTGACACACATACTCATAGACATATACATATAAAGTACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGCACAGTGACACACATACTCATAGACATATACATATAAAGTACA  442

seq1  TATATAAATGTAGTTAACCTTTTGTTGCAATGAAACCCAAGAAAATGTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAATGTAGTTAACCTTTTGTTGCAATGAAACCCAAGAAAATGTTT  492

seq1  TAAATTTTAAGGTTGTTATCCTTCCCGAGGAGTTTATTCTCGTATCTCCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTAAGGTTGTTATCCTTCCCGAGGAGTTTATTCTCGTATCTCCT  542

seq1  GTAACGGGCTCACTCTGCCTTCCAACTGGAATTATCTCCTAGGACAGAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACGGGCTCACTCTGCCTTCCAACTGGAATTATCTCCTAGGACAGAGC  592

seq1  GATGATTTCTAATTTCTATTTGTCACATGCAGACAAGTGGAAACAACTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTTCTAATTTCTATTTGTCACATGCAGACAAGTGGAAACAACTCT  642

seq1  CCTGTTTGGATCTCCACCCTCCCAAATAGTAAATCCATACTGATGTGAGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTGGATCTCCACCCTCCCAAATAGTAAATCCATACTGATGTGAGC  692

seq1  AATTGCAGGATATGCAAAGCGTGGAAAGAACAGAAACACCGGAGTGCTGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCAGGATATGCAAAGCGTGGAAAGAACAGAAACACCGGAGTGCTGA  742

seq1  AATGAATTAAATTAATTTGGCTGAGAACAGCAGAATTTAAAATTTCATAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATTAAATTAATTTGGCTGAGAACAGCAGAATTTAAAATTTCATAA  792

seq1  TTTTCATTGTCAAAGATGACTTTAAAAATCAGACTGCTATTTATGCTTCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTGTCAAAGATGACTTTAAAAATCAGACTGCTATTTATGCTTCT  842

seq1  TCTCCTTGATGCATTTTGTTTATTTGGTCACAGTTCTCCTGTGGTTAGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTGATGCATTTTGTTTATTTGGTCACAGTTCTCCTGTGGTTAGAA  892

seq1  TGCATATTACAGAATCTGGATTATTTTGAAGCTGTAGTAGATACCAGGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATTACAGAATCTGGATTATTTTGAAGCTGTAGTAGATACCAGGAA  942

seq1  CTTCTCATTTTTGCAAGTGAAAAAAAAAAAAAAGAACTACATTTCTCAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCATTTTTGCAAGTGAAAAAAAAAAAAAAGAACTACATTTCTCAAA  992

seq1  TCCAGAGTTAAGAGCAATAGTGCAAGGGCCATGATGAAATTGCTTTGCAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGTTAAGAGCAATAGTGCAAGGGCCATGATGAAATTGCTTTGCAG  1042

seq1  CTATTAATGGGAGTCTAGACAACAGCCCTTCCATGAAGAGAAGACAGCTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAATGGGAGTCTAGACAACAGCCCTTCCATGAAGAGAAGACAGCTC  1092

seq1  CAACCTAGTTTCGGTGCTTCTGAAACGCCACCCCTAAAACATAGAATTC  1148
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTAGTTTCGGTGCTTCTGAAACGCCACCCCTAAAACATAGAATTC  1141

seq1: chr13_76259745_76260052
seq2: B6Ng01-069A20.g_65_376

seq1  GAATTCTCCTGATCATGAATTCAGTTTCAGAGTGTAATGTAAAGTAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGATCATGAATTCAGTTTCAGAGTGTAATGTAAAGTAGTTT  50

seq1  TACTTCCAGTGTTTAAACGTGTTAATGAGTCATTAATGTTTTCTGTATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCAGTGTTTAAACGTGTTAATGAGTCATTAATGTTTTCTGTATTT  100

seq1  GCTGCTTTATTTATGATTTTAGTTCCTTAAGTCAGGACTTGGTAAATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTTATTTATGATTTTAGTTCCTTAAGTCAGGACTTGGTAAATTAT  150

seq1  GTATGAAGTATGACATTTATATATCTAGATATTGGTAGTTGTGTGTATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAAGTATGACATTTATATATCTAGATATTGGTAGTTGTGTGTATAT  200

seq1  ATGTATTTGTACACATACATGTATATATATATATACACACACGCATATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTTGTACACATACATGTATATATATATATACACACACGCATATAT  250

seq1  GTATATATATGTATGTGTGTGTGTGTATGTATGTATATATATA----TAT  296
      |||||||||||||||||||||||||||||||||||||||||||    | |
seq2  GTATATATATGTATGTGTGTGTGTGTATGTATGTATATATATATGTGTGT  300

seq1  GTATATATATAT  308
      ||||||||||||
seq2  GTATATATATAT  312