BAC Information

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BAC

Clone NameB6Ng01-069P20
Chromosome13 (Build37)
Map Location 97,790,993 - 97,954,475
singlet/doubletdoublet
Overlap gene1700029F12Rik, EG620648, 5730427N09Rik, LOC100039663, Gfm2, Hexb
Upstream geneSv2c, LOC667582, 1200014M14Rik, 9330128J19Rik, Polk, Col4a3bp, Hmgcr, LOC100039456, LOC625662
Downstream geneEnc1, LOC667676, LOC100039691, LOC100039704, EG328314, LOC100039526, LOC100039740, Rgnef
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069P20.bB6Ng01-069P20.g
ACCDH888130DH888131
length421308
definitionDH888130|Mus musculus domesticus DNA, BAC clone: B6Ng01-069P20, 5' end.DH888131|Mus musculus domesticus DNA, BAC clone: B6Ng01-069P20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,790,993 - 97,791,419)(97,954,168 - 97,954,475)
sequence
ccttcatgtgctctaaatctggcctgcatgttcacttggttgtctctcta
tcttggtaatgggggaccccagcatgctggacttctacagaataaaacat
actttgcgtttatctctttgagtcaccacgcccggcttagatgacctttc
taaagtactcagctaatgtgtgtctcttagcctagtccatttacgatcag
taatgactgaagtgtatggcagcagatgggctggtacaatggaatatttc
ttaatcacaataaggcttcagtttttgccagaggccagctccagagctcc
agttctctcctgaaggtagccaaggataaacagcatcattgggggcaaga
cttgttcttgggattgattatgatttgtttttgtttgttcctgtcttgat
tctatgggactctgaaacctg
tcttttcttattgtaaattattgaagaacagtggaaaccagtggtatccc
tgtctctctgggctgtcttggttttgctggctacattccacagcatccat
taactatatgttgacttggggtttgaaggtcaagatgacttctacaacca
gagcctgtgttacgagacatatgctaacccttatctttcgatggaccttt
atcattatttacaactagtatggagcacaaatcttcaagtgacacagaga
gactaagttaatatttaaacacaattaagttcttattgtttgggtggggg
gatgggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_97790993_97791419
seq2: B6Ng01-069P20.b_49_475

seq1  GAATTCCCTTCATGTGCTCTAAATCTGGCCTGCAAGTTCACTTGGTTGTC  50
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GAATTCCCTTCATGTGCTCTAAATCTGGCCTGCATGTTCACTTGGTTGTC  50

seq1  TCTCTATCTTGGTAATGGGGGACCCCAGCATGCTGGACTTCTACAGAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATCTTGGTAATGGGGGACCCCAGCATGCTGGACTTCTACAGAATA  100

seq1  AAACATACTTTGCGTTTATCTCTTTGAGTCACCACGCCCGGCTTAGATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATACTTTGCGTTTATCTCTTTGAGTCACCACGCCCGGCTTAGATGA  150

seq1  CCTTTCTAAAGTACTCAGCTAATGTGTGTCTCTTAGCCTAGTCCATTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTAAAGTACTCAGCTAATGTGTGTCTCTTAGCCTAGTCCATTTAC  200

seq1  GATCAGTAATGACTGAAGTGTATGGCAGCAGATGGGCTGGTACAATGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGTAATGACTGAAGTGTATGGCAGCAGATGGGCTGGTACAATGGAA  250

seq1  TATTTCTTAATCACAATAAGGCTTCAGTTTTTGCCAGAGGCCAGCTCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTAATCACAATAAGGCTTCAGTTTTTGCCAGAGGCCAGCTCCAG  300

seq1  AGCTCCAGTTCTCTCCTGAAGGTAGCCAAGGAGAAACAGCATCAGTGGGG  350
      |||||||||||||||||||||||||||||||| ||||||||||| |||||
seq2  AGCTCCAGTTCTCTCCTGAAGGTAGCCAAGGATAAACAGCATCATTGGGG  350

seq1  GCAAGACTTGGTCTTGGGAGTGATTAGGATTTGTTTTTGTGTGTACCTGT  400
      |||||||||| |||||||| |||||| ||||||||||||| ||| |||||
seq2  GCAAGACTTGTTCTTGGGATTGATTATGATTTGTTTTTGTTTGTTCCTGT  400

seq1  CTTGATTCTAAGGTACTCTGAAGCCTG  427
      |||||||||| || |||||||| ||||
seq2  CTTGATTCTATGGGACTCTGAAACCTG  427

seq1: chr13_97954168_97954475
seq2: B6Ng01-069P20.g_74_381 (reverse)

seq1  AACCCATCCCCCCACCCAAACAATAAGAACTTAATTGTGTTTAAATATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCATCCCCCCACCCAAACAATAAGAACTTAATTGTGTTTAAATATTA  50

seq1  ACTTAGTCTCTCTGTGTCACTTGAAGATTTGTGCTCCATACTAGTTGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTCTCTCTGTGTCACTTGAAGATTTGTGCTCCATACTAGTTGTAA  100

seq1  ATAATGATAAAGGTCCATCGAAAGATAAGGGTTAGCATATGTCTCGTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGATAAAGGTCCATCGAAAGATAAGGGTTAGCATATGTCTCGTAAC  150

seq1  ACAGGCTCTGGTTGTAGAAGTCATCTTGACCTTCAAACCCCAAGTCAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCTCTGGTTGTAGAAGTCATCTTGACCTTCAAACCCCAAGTCAACA  200

seq1  TATAGTTAATGGATGCTGTGGAATGTAGCCAGCAAAACCAAGACAGCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTAATGGATGCTGTGGAATGTAGCCAGCAAAACCAAGACAGCCCA  250

seq1  GAGAGACAGGGATACCACTGGTTTCCACTGTTCTTCAATAATTTACAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACAGGGATACCACTGGTTTCCACTGTTCTTCAATAATTTACAATA  300

seq1  AGAAAAGA  308
      ||||||||
seq2  AGAAAAGA  308