BAC Information

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BAC

Clone NameB6Ng01-070G21
Chromosome13 (Build37)
Map Location 7,140,815 - 7,285,239
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039388, LOC100039395, Pitrm1, Pfkp, LOC100039532
Downstream geneLOC667611, EG623516, LOC791083, LOC382722, Adarb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070G21.bB6Ng01-070G21.g
ACCDH888437DH888438
length1,1551,177
definitionDH888437|Mus musculus domesticus DNA, BAC clone: B6Ng01-070G21, 5' end.DH888438|Mus musculus domesticus DNA, BAC clone: B6Ng01-070G21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,284,078 - 7,285,239)(7,140,815 - 7,142,008)
sequence
gaattccagtgacaggcacactctgggtgggcggaggtaggcaactgttt
ctaggcattatgcccagcttcagcaagaagtcatgagatctcagtatggg
agagaaacaccgccgccatggccagtgggatagagtactgccaggtagca
atcatctatgagaaacttcctgatgagtttgaatctgagaactattttca
tctgatgttttatttagagtttataaagtagcgagtagcttaggccaata
atttctagccactggtcacttacccgttccctagatccttgtgatatggg
ctagaatcctgtttctgtgagcgttacctgaaaatatgagcgagccattc
aagtttaccttttcgtttcactgacttttgagtgattttgttcaaaacac
aagatccacttgtccaaagctgcaatgtccttttatgagcacactcatcc
ccgtgacctagatgtctcctctgatgagacaaatctataaattacatagc
tttaaatttactgaatcattaatcctgaaggtttcagtgtccttcatgca
gcaagatgacacagctgacccatgattagagcacgtgctctcatttctca
ggtgggcaactcctctgttctacataagtcaccaggtcactacggtcaac
aggcctacccacatagtcgatccagtttagttttacacttttccaccgtg
atccacaagaagaaacacactttacttggaaatatagaaaacacgtgcat
ttcaaaatgatacttccctcactagtcatgtgtgtgtattcacacatgtg
tttatacatctgcacacactaaagttcaacctatgggggtctttctctct
atattactcttaaggttcattttttagataagttctgtaattcaatatgg
tctcaccagttacccagattgctttgtctgggatcctgctctctccctcc
cattgctgagactacaatgctttccaccacattcagcttttatgggagtt
ctagggatctgaacccatgtcctcaaacttacactaagtcatcttgccag
ccccaactattaatatattctacataggtttagttcattctaaaatttcc
tgcatgaaaagagatccagacaataaccagtgactgactagttcttgttt
ggact

gaattcaacaggaagaatgtgcagtgccaacagaccttcagaggacaagg
caccagcatctactggctgtcataccagtacatacgaacagtgggcttct
gtgccaagagatgtctgttgagtgtaatttagttctactagagttgcaca
aatttattttcccactagcgtcatctaaaatcttatatttagcctaataa
gatttattgatgtatttatatgtgtatgtgtgtgtctgtgttacacctgt
gcccatccccacacgttttgagagttggttctctctttccaccatcatgt
gtccaatcaaactcaggggctctgtgttggtaagaggctcctttacatac
caagtcatcttgcagacaaagagttacaataaaattaaggatgatataaa
ctgatgtaaaatgtatattcttaaaatgatagcttggttgaattattatt
tatatctaaaagacagcacttagagatgacaaaatttacataaacaaatc
aactgagcaacaaaaatataaactaatggaatggttaaccttaagaaaaa
aaataaaattgcatgtaaactcactctgtaccaataaaaattataaaata
cagtaagagaatctggaaggatgtgaacagttctctacagacaattctga
atcattcttgtaatacacagtgacatttgcagactcctgcaaaaatgcct
tctttatggaccgttaacaagctatatgttgatttccccaataagatatg
ttgctaaatagtcttaattaagataaagtcaaatgatctttatctttctt
gaaaaaaatcacccataagttcacgtaatttatttttgctcagaacaaga
tatttaaaacattctcaaggacattatgtcttccggctttaaaatatcaa
gtaattatcaaatcaatgatcgtttgggggaaagtaatgaagtatggaaa
ataaccacttcaaattatataatcattaaagctgatgtcattagaaggcg
ttttagagtgagagtggtaaatgtccttcaaggttggataaaaaactgaa
gttatattcaaaagtaaatttagaagaatatttctcttttttaataatct
cttacagaattatttttctctcaaattactgataaatggtaacatcatat
gtaacgacagattcatctcccatcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_7284078_7285239
seq2: B6Ng01-070G21.b_46_1200 (reverse)

seq1  AGTCAAAACACAGAACTAGTCAGTACACTTGGTTATTGTCTGGGATACTC  50
      |||| ||||| ||||||||||||| ||| |||||||||||| |||| |||
seq2  AGTCCAAACA-AGAACTAGTCAGT-CAC-TGGTTATTGTCT-GGAT-CTC  45

seq1  TTTTTCATGCACGGAAATTTTAGAATGAAACTAAACCTATGTAGAATATA  100
       |||||||||| ||||||||||||||| ||||||||||||||||||||||
seq2  -TTTTCATGCA-GGAAATTTTAGAATG-AACTAAACCTATGTAGAATATA  92

seq1  TT-ATAGTTGGGGCTGGCAAGATGACTTAGTGTAAGTTTGAGGACATGGG  149
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAGTTGGGGCTGGCAAGATGACTTAGTGTAAGTTTGAGGACATGGG  142

seq1  TTCAGATCCCTAGAACTCCCATAAAAGCTGAATGTGGTGGAAAGCATTGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATCCCTAGAACTCCCATAAAAGCTGAATGTGGTGGAAAGCATTGT  192

seq1  AGTCTCAGCAATGGGAGGGAGAGAGCAGGATCCCAGACAAAGCAATCTGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCAGCAATGGGAGGGAGAGAGCAGGATCCCAGACAAAGCAATCTGG  242

seq1  GTAACTGGTGAGACCATATTGAATTACAGAACTTATCTAAAAAATGAACC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTGGTGAGACCATATTGAATTACAGAACTTATCTAAAAAATGAACC  292

seq1  TTAAGAGTAATATAGAGAGAAAGACCCCCATAGGTTGAACTTTAGTGTGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGTAATATAGAGAGAAAGACCCCCATAGGTTGAACTTTAGTGTGT  342

seq1  GCAGATGTATAAACACATGTGTGAATACACACACATGACTAGTGAGGGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGTATAAACACATGTGTGAATACACACACATGACTAGTGAGGGAA  392

seq1  GTATCATTTTGAAATGCACGTGTTTTCTATATTTCCAAGTAAAGTGTGTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATTTTGAAATGCACGTGTTTTCTATATTTCCAAGTAAAGTGTGTT  442

seq1  TCTTCTTGTGGATCACGGTGGAAAAGTGTAAAACTAAACTGGATCGACTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTGTGGATCACGGTGGAAAAGTGTAAAACTAAACTGGATCGACTA  492

seq1  TGTGGGTAGGCCTGTTGACCGTAGTGACCTGGTGACTTATGTAGAACAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTAGGCCTGTTGACCGTAGTGACCTGGTGACTTATGTAGAACAGA  542

seq1  GGAGTTGCCCACCTGAGAAATGAGAGCACGTGCTCTAATCATGGGTCAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTGCCCACCTGAGAAATGAGAGCACGTGCTCTAATCATGGGTCAGC  592

seq1  TGTGTCATCTTGCTGCATGAAGGACACTGAAACCTTCAGGATTAATGATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCATCTTGCTGCATGAAGGACACTGAAACCTTCAGGATTAATGATT  642

seq1  CAGTAAATTTAAAGCTATGTAATTTATAGATTTGTCTCATCAGAGGAGAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAATTTAAAGCTATGTAATTTATAGATTTGTCTCATCAGAGGAGAC  692

seq1  ATCTAGGTCACGGGGATGAGTGTGCTCATAAAAGGACATTGCAGCTTTGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGTCACGGGGATGAGTGTGCTCATAAAAGGACATTGCAGCTTTGG  742

seq1  ACAAGTGGATCTTGTGTTTTGAACAAAATCACTCAAAAGTCAGTGAAACG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTGGATCTTGTGTTTTGAACAAAATCACTCAAAAGTCAGTGAAACG  792

seq1  AAAAGGTAAACTTGAATGGCTCGCTCATATTTTCAGGTAACGCTCACAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTAAACTTGAATGGCTCGCTCATATTTTCAGGTAACGCTCACAGA  842

seq1  AACAGGATTCTAGCCCATATCACAAGGATCTAGGGAACGGGTAAGTGACC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGATTCTAGCCCATATCACAAGGATCTAGGGAACGGGTAAGTGACC  892

seq1  AGTGGCTAGAAATTATTGGCCTAAGCTACTCGCTACTTTATAAACTCTAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTAGAAATTATTGGCCTAAGCTACTCGCTACTTTATAAACTCTAA  942

seq1  ATAAAACATCAGATGAAAATAGTTCTCAGATTCAAACTCATCAGGAAGTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACATCAGATGAAAATAGTTCTCAGATTCAAACTCATCAGGAAGTT  992

seq1  TCTCATAGATGATTGCTACCTGGCAGTACTCTATCCCACTGGCCATGGCG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATAGATGATTGCTACCTGGCAGTACTCTATCCCACTGGCCATGGCG  1042

seq1  GCGGTGTTTCTCTCCCATACTGAGATCTCATGACTTCTTGCTGAAGCTGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTGTTTCTCTCCCATACTGAGATCTCATGACTTCTTGCTGAAGCTGG  1092

seq1  GCATAATGCCTAGAAACAGTTGCCTACCTCCGCCCACCCAGAGTGTGCCT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAATGCCTAGAAACAGTTGCCTACCTCCGCCCACCCAGAGTGTGCCT  1142

seq1  GTCACTGGAATTC  1162
      |||||||||||||
seq2  GTCACTGGAATTC  1155


seq1: chr13_7140815_7142008
seq2: B6Ng01-070G21.g_65_1241

seq1  GAATTCAACAGGAAGAATGTGCAGTGCCAACAGACCTTCAGAGGACAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGGAAGAATGTGCAGTGCCAACAGACCTTCAGAGGACAAGG  50

seq1  CACCAGCATCTACTGGCTGTCATACCAGTACATACGAACAGTGGGCTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGCATCTACTGGCTGTCATACCAGTACATACGAACAGTGGGCTTCT  100

seq1  GTGCCAAGAGATGTCTGTTGAGTGTAATTTAGTTCTACTAGAGTTGCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAAGAGATGTCTGTTGAGTGTAATTTAGTTCTACTAGAGTTGCACA  150

seq1  AATTTATTTTCCCACTAGCGTCATCTAAAATCTTATATTTAGCCTAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTTTCCCACTAGCGTCATCTAAAATCTTATATTTAGCCTAATAA  200

seq1  GATTTATTGATGTATTTATATGTGTATGTGTGTGTCTGTGTTACACCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATTGATGTATTTATATGTGTATGTGTGTGTCTGTGTTACACCTGT  250

seq1  GCCCATCCCCACACGTTTTGAGAGTTGGTTCTCTCTTTCCACCATCATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATCCCCACACGTTTTGAGAGTTGGTTCTCTCTTTCCACCATCATGT  300

seq1  GTCCAATCAAACTCAGGGGCTCTGTGTTGGTAAGAGGCTCCTTTACATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAATCAAACTCAGGGGCTCTGTGTTGGTAAGAGGCTCCTTTACATAC  350

seq1  CAAGTCATCTTGCAGACAAAGAGTTACAATAAAATTAAGGATGATATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCATCTTGCAGACAAAGAGTTACAATAAAATTAAGGATGATATAAA  400

seq1  CTGATGTAAAATGTATATTCTTAAAATGATAGCTTGGTTGAATTATTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGTAAAATGTATATTCTTAAAATGATAGCTTGGTTGAATTATTATT  450

seq1  TATATCTAAAAGACAGCACTTAGAGATGACAAAATTTACATAAACAAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTAAAAGACAGCACTTAGAGATGACAAAATTTACATAAACAAATC  500

seq1  AACTGAGCAACAAAAATATAAACTAATGGAATGGTTAACCTTAAGAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGCAACAAAAATATAAACTAATGGAATGGTTAACCTTAAGAAAAA  550

seq1  AAATAAAATTGCATGTAAACTCACTCTGTACCAATAAAAATTATAAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAATTGCATGTAAACTCACTCTGTACCAATAAAAATTATAAAATA  600

seq1  CAGTAAGAGAATCTGGAAGGATGTGAACAGTTCTCTACAGACAATTCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGAGAATCTGGAAGGATGTGAACAGTTCTCTACAGACAATTCTGA  650

seq1  ATCATTCTTGTAATACACAGTGACATTTGCAGACTCCTGCAAAAATGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCTTGTAATACACAGTGACATTTGCAGACTCCTGCAAAAATGCCT  700

seq1  TCTTTATGGACCGTTAACAAGCTATATGTTGATTTCCCCAATAAGATATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATGGACCGTTAACAAGCTATATGTTGATTTCCCCAATAAGATATG  750

seq1  TTGCTAAATAGTCTTAATTAAGATAAAGTCAAATGATCTTTATCTTTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAAATAGTCTTAATTAAGATAAAGTCAAATGATCTTTATCTTTCTT  800

seq1  GAAAAAAAATCACCCATAAGTTCACGTAATTTATTTTTGCTCAGAACAAG  850
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-AAAAAAATCACCCATAAGTTCACGTAATTTATTTTTGCTCAGAACAAG  849

seq1  ATATTTAAAACATTCTCAAGGACATTATGTCTTCCGGCTTTAAAATATCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAAAACATTCTCAAGGACATTATGTCTTCCGGCTTTAAAATATCA  899

seq1  AGTAATTATCAAATCAATGATCGTTTGGGGGAAAGTAATGAAGTATGGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTATCAAATCAATGATCGTTTGGGGGAAAGTAATGAAGTATGGAA  949

seq1  AATAACCACTTCAAATTATATAAATCATTAAAGCTGATGTCATTAGGAAG  1000
      ||||||||||||||||||||| ||||||||||||||||||||||| ||||
seq2  AATAACCACTTCAAATTATAT-AATCATTAAAGCTGATGTCATTA-GAAG  997

seq1  GCGTTTTAAGAGTGAGAGTGTTAAATGT-CTTCAAAGTTGGATAAAAAAC  1049
      ||||||| |||||||||||| ||||||| |||||| ||||||||||||||
seq2  GCGTTTT-AGAGTGAGAGTGGTAAATGTCCTTCAAGGTTGGATAAAAAAC  1046

seq1  TGAAGTTATATTCAAAAGTAAAATTAAGAAGATATATTTCTCTTTTTATA  1099
      ||||||||||||||||||| ||||| |||||| |||||||||||||| ||
seq2  TGAAGTTATATTCAAAAGT-AAATTTAGAAGA-ATATTTCTCTTTTT-TA  1093

seq1  ATTAATCTCTTACAGATTTATTTTTCTCTTAAAAATTACTTGATTAAATA  1149
      | |||||||||||||| ||||||||||||   ||||||| ||| ||||| 
seq2  A-TAATCTCTTACAGAATTATTTTTCTCT--CAAATTAC-TGA-TAAATG  1138

seq1  GATAAACATCATAATGTAAACAGGACAGATTTCATCT-CCATCATT  1194
      |   |||||||| |||||   | |||||| ||||||| ||||||||
seq2  G--TAACATCAT-ATGTA---ACGACAGA-TTCATCTCCCATCATT  1177


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