BAC Information

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BAC

Clone NameB6Ng01-070M17
Chromosome13 (Build37)7 (Build37)
Map Location 68,523,746 - 68,523,94350,063,877 - 50,064,828
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneC330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272
Downstream geneLOC100042223, Mtrr, LOC100042233, Fastkd3, 1700001L19Rik, Adcy2, LOC666205, LOC218332
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070M17.bB6Ng01-070M17.g
ACCDH888680DH888681
length198967
definitionDH888680|Mus musculus domesticus DNA, BAC clone: B6Ng01-070M17, 5' end.DH888681|Mus musculus domesticus DNA, BAC clone: B6Ng01-070M17, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(68,523,746 - 68,523,943)(50,063,877 - 50,064,828)
sequence
tttgtttagctctgttaatagggttatttgattctcaggagtcttgagga
gtactcttggctccagctgcatatgtagcaggagatggccttgtcagtca
tcaatggaaggagaggtccttggtcctatgaaggctggatagatgaccca
gtatagggaaatccaggacggtgaggttggagtggatgggtgggtgga
gaattcccatgtgcatttcagccctttcaacatcagctcaggtaaggaac
gactcacgtttgcacaaacggagagacaaagaaagcacagtccacatgtg
atgggacatttctctgcctcagaaataaaataggcattataatttgaaac
aacagacatcagcatggaatactttctctaagataaatgatataatcaca
gagtaaataaacttaggtcatgctttctcagtggaggcattcagagttgt
tacccaatatgtataaagcttcaattatgtcaaataagttgtggaaatgt
actgggaacatgatactgaccctaaaaatttaatcctggacacatctgaa
tttcttgaagaggtaggtcctatgctgtgctcttaatacaaaagtaaact
aaggaataatattttttatgttctttttttattgggtatttatttcatat
acatttccaatgctatcccaaaagtcccccacatgctccaccacccaacc
acgcccatttcttggccctgttgtttccctgtactgaggcatataaagtt
tgcaggactaatggtcctctctttccactgatggccaactaggctatctt
ctgattcatatgcagctagagacacaagctctggggtgggggtggggtac
tggttagttcatattgttgttctaggaatattatttttaaagacataact
atgggagatacttagatagtttaatacagtaactttgttgatacacttta
aattacacacaataaaatgtgcagttctttgtatatcagttgtcctcaat
aagatgtatcaacctgttatctatctatctatctatctatctatctatct
atctgttcatgcatgtgtgcattagatagacatatgcacagatttattta
ttagtacaacacctgtgtgtgctaataatgaatttcatttctggttataa
gttcgggaagaagagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_68523746_68523943
seq2: B6Ng01-070M17.b_50_247

seq1  TTTGTTTAGCTTTGTTAATAGGGATATTTGATTCTCAGGAGTCTTGAGGA  50
      ||||||||||| ||||||||||| ||||||||||||||||||||||||||
seq2  TTTGTTTAGCTCTGTTAATAGGGTTATTTGATTCTCAGGAGTCTTGAGGA  50

seq1  GTACACTTGGCTCCAGCTGCATAGGTAGCAGCAGATGGCCTTGTCAGTCA  100
      |||| |||||||||||||||||| ||||||| ||||||||||||||||||
seq2  GTACTCTTGGCTCCAGCTGCATATGTAGCAGGAGATGGCCTTGTCAGTCA  100

seq1  TCAATGGAAGGAGAGGTCCTTGGTCCTATGAAGGCTAGATAGATGCCCCA  150
      |||||||||||||||||||||||||||||||||||| |||||||| ||||
seq2  TCAATGGAAGGAGAGGTCCTTGGTCCTATGAAGGCTGGATAGATGACCCA  150

seq1  GTATAGGGAAATCCAGGACGGTGAGGTTGGAGTGGATGGGTGGGTGGA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGGGAAATCCAGGACGGTGAGGTTGGAGTGGATGGGTGGGTGGA  198

seq1: chr7_50063877_50064828
seq2: B6Ng01-070M17.g_67_992

seq1  GAATTCCCATGTGCATTTCAGCCCTTTCAACACCAGCTCAGGTAAGGAAA  50
      |||||||||||||||||||||||||||||||| |||||||||||||||| 
seq2  GAATTCCCATGTGCATTTCAGCCCTTTCAACATCAGCTCAGGTAAGGAAC  50

seq1  GACTCACGTTTGAAC-AACG--GAGACAAAGAAAGCACAGTACACACAGG  97
      |||||||||||| || ||||  ||||||||||||||||||| ||||   |
seq2  GACTCACGTTTGCACAAACGGAGAGACAAAGAAAGCACAGTCCACATGTG  100

seq1  ATGGGACATATCTCTGCCTCAGAAATAAAAGAGGCGCTGGGATTTAGAAC  147
      ||||||||| |||||||||||||||||||| ||||  |   ||||  |||
seq2  ATGGGACATTTCTCTGCCTCAGAAATAAAATAGGCATTATAATTTGAAAC  150

seq1  AACAGACATGAGGGTGGAATACTTTCTCTAAGATAAATGATATAGTCACA  197
      ||||||||| ||  |||||||||||||||||||||||||||||| |||||
seq2  AACAGACATCAGCATGGAATACTTTCTCTAAGATAAATGATATAATCACA  200

seq1  GAGTGACCAACGTTAGGTCATGCTTTCTCAGTGGAAGAATGAAGAGTTGT  247
      |||| |  ||  ||||||||||||||||||||||| | ||  ||||||||
seq2  GAGTAAATAAACTTAGGTCATGCTTTCTCAGTGGAGGCATTCAGAGTTGT  250

seq1  TACCCAATATGTATAAAGCTTCAATCATGTCAGATAAATAAATGGTAGAA  297
      ||||||||||||||||||||||||| |||||    |||||| | || |||
seq2  TACCCAATATGTATAAAGCTTCAATTATGTC----AAATAAGTTGTGGAA  296

seq1  ATCTACTGGGAAAATGATACCGACCCTAACAATTTAATCCTGGACACATC  347
      || ||||||||| ||||||| |||||||| ||||||||||||||||||||
seq2  ATGTACTGGGAACATGATACTGACCCTAAAAATTTAATCCTGGACACATC  346

seq1  TGAATTTGTTGAAGAGGTAGGTCCTATGCTGTGTTCTTAATACAAAAATA  397
      ||||||| ||||||||||||||||||||||||| ||||||||||||| ||
seq2  TGAATTTCTTGAAGAGGTAGGTCCTATGCTGTGCTCTTAATACAAAAGTA  396

seq1  AACTAATGAATATTATTTTTTATTTTCTTTTTTTTATTGGGTATTTATTT  447
      |||||| ||||| |||||||||| ||| ||||||||||||||||||||||
seq2  AACTAAGGAATAATATTTTTTATGTTC-TTTTTTTATTGGGTATTTATTT  445

seq1  CATTTACATTTCCAATGCTATCCCAAAAGTCCCCCACATGCTCCACCACT  497
      ||| ||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CATATACATTTCCAATGCTATCCCAAAAGTCCCCCACATGCTCCACCACC  495

seq1  CAGCCACATTCATTTCTTGGCCCCGTCCTTCCCCTGTACTGAGGCATATA  547
      || ||||   ||||||||||||| ||  || |||||||||||||||||||
seq2  CAACCACGCCCATTTCTTGGCCCTGTTGTTTCCCTGTACTGAGGCATATA  545

seq1  AAGTTTGCACGACCAATGTTCCTCTCTTTCTACTGATGGCCGACTAGGCC  597
      ||||||||| ||| |||| ||||||||||| |||||||||| ||||||| 
seq2  AAGTTTGCAGGACTAATGGTCCTCTCTTTCCACTGATGGCCAACTAGGCT  595

seq1  ATCTTCTGATTCATATGCAGCTAGAGACACAAGCTCCGTGG-GTGGGTGG  646
      |||||||||||||||||||||||||||||||||||| | || | ||||||
seq2  ATCTTCTGATTCATATGCAGCTAGAGACACAAGCTCTGGGGTGGGGGTGG  645

seq1  GGTACTAGTTAGTTCATATTGTTGTTCCAGGAATGTGATTTTTAAAAGAC  696
      |||||| |||||||||||||||||||| |||||| | |||||| ||||||
seq2  GGTACTGGTTAGTTCATATTGTTGTTCTAGGAATATTATTTTT-AAAGAC  694

seq1  ATAACTATGGGAGATACTTAGATAGTTTAATACAGTAACTTTGTTGATAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATAACTATGGGAGATACTTAGATAGTTTAATACAGTAACTTTGTTGATA-  743

seq1  CACATTAAATTACACACAATAAAATGTGCAGTTCTTTGTATACCAGTCTT  796
      ||| |||||||||||||||||||||||||||||||||||||| |||| | 
seq2  CACTTTAAATTACACACAATAAAATGTGCAGTTCTTTGTATATCAGT-TG  792

seq1  TCCTCAAATAAGATCTATCACCTGTTGTCTATCTATCTGTCTATCTATCT  846
      ||||| |||||||| |||||              | ||||         |
seq2  TCCTC-AATAAGATGTATCA--------------ACCTGT---------T  818

seq1  ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATGCATGTCT  896
      |||||||||||||||||||||||||||||||||||| |  |||||||| |
seq2  ATCTATCTATCTATCTATCTATCTATCTATCTATCTGTTCATGCATGTGT  868

seq1  GCATTAGATAGACATATGCAGA---TTATTTATCAGTACAAACATCTGTC  943
      |||||||||||||||||||| |   |||||||| ||||| |||| |||| 
seq2  GCATTAGATAGACATATGCACAGATTTATTTATTAGTAC-AACACCTGTG  917

seq1  TGTGCTAAT  952
      |||||||||
seq2  TGTGCTAAT  926