BAC Information

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BAC

Clone NameB6Ng01-070P05
Chromosome13 (Build37)
Map Location 21,448,777 - 21,449,909
singlet/doubletsinglet
Overlap genenone
Upstream geneElmo1, LOC100040226, LOC665381, LOC665386, Aoah, Olfr1370, Olfr1369-ps1, Olfr42, Olfr1368, Trim27, Gpx5, LOC625752, Gpx6, Olfr1367
Downstream geneZfp96, LOC665454, Zkscan3, Pgbd1, 4930470G03Rik, Zfp187, 4921504I05Rik, OTTMUSG00000000421, AK157302, LOC100040340, Zfp192, Olfr1366, Olfr1365, Olfr1364, Olfr1362, Olfr1363-ps1, Olfr11, Olfr1361, Olfr1360, Olfr1359, Hist1h2bl, Hist1h2ai, Hist1h3h, Hist1h2aj, Hist1h2bm, Hist1h4j, Hist1h4k, Hist1h2ak, Hist1h2bn, LOC100041150, Hist1h1b, Hist1h3i, Hist1h2an, Hist1h2bp, LOC665596, Rp23-480b19.10, LOC100041230, Hist1h4m, Hist1h2ao, LOC665622, LOC665634, Zfp184, Gm24, Prss16, Hist1h2ah, Hist1h2bk, Hist1h4i, Hist1h2ag, Hist1h2bj, LOC665690, V1rh17, V1rh2, V1ri8, LOC632534, V1ri1, V1ri9, OTTMUSG00000000480, V1ri6, LOC665726, V1rh21, V1ri3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070P05.g
ACCDH888792
length1,129
definitionDH888792|Mus musculus domesticus DNA, BAC clone: B6Ng01-070P05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagataaactacaagagatttcacttctttagaaatctccttct
ttgaggtttaatcttcactccaagtcctgttctcaacactgaaataacaa
gtgagaaaaaccagcgttatttttctaaaagggaagggaccagtgtttct
gggagaagatactctgtattagatctgcttgtttaactacctgccactcc
ctgaaaacttcctgagttgcttcctcagtactgaatgttatgcctggtat
ctattagtcactaagtgaatatgtaaattagcattcagggaataagacta
gctcctggtgaaatgttaactccaccagtctcctgaacatgccattcttc
tttcaagttaccctgctgctggtttttcatgatttggaactggccacagg
aagacttatgaggcattcttggagttggtgtctcctttatagactcttcc
ggttcccaactgcgcttgagacctgatggaaaggataattaggaatctaa
taccggagagaagattgcaaggaggccttcccacggccactgtgaaaaaa
agggaacacagatgtggtaaagaaaaaccaaagtcaaggctggagagagc
actctggtttagagcacttgttgctcttgtagagaacctggttttttatc
tccagcatctgcacaatggcttgcaacaattttgactccagggtccaggg
atttcagtgccctctcctgacctccacaggcaccaggcccacatgtggtg
ctcacacatacatgcagtgaagacatccatgtacataaaactacatatat
ttaaacaaacaacaaacaaacaaacaaacaaacaaaggcagatagagtaa
gcgtctataacagatccaggcaggcagaaacaccctccttctctcatact
gtcagtggtggcctacgcctggcataagcaactaaaaggaatactcgctt
agctcatttcagggattcggtccatggcctacagctttcaagtgcttacc
tcaagcacaggatacttgagtatatgggtgaaaattttcttgatagttga
aagggagcagaaagcttgacgcccggtcagaattctcccaaataaaaccc
aatctcggagggttaagggggtggggtgg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_21448777_21449909
seq2: B6Ng01-070P05.g_70_1198 (reverse)

seq1  CCACCCCTGCCCCTTACCCCTCCGAGGTTGGGTTTTATTT-GGTGAATCT  49
      |||||||  ||||||| ||||||||| ||||||||||||| || ||||  
seq2  CCACCCCACCCCCTTAACCCTCCGAGATTGGGTTTTATTTGGGAGAATTC  50

seq1  TGACCCTGGCTGTCAAGCTCTCTGCTTCCTTTCAACTATCAGGAAACTTT  99
      |||||  ||  |||||||| |||||| |||||||||||||| |||| |||
seq2  TGACC--GGGCGTCAAGCTTTCTGCTCCCTTTCAACTATCAAGAAAATTT  98

seq1  TCACCCATATACTCAAAGTATTCCTGTGCTTGAGGTAAGCACTTGAAGCC  149
      |||||||||||||| ||||| ||||||||||||||||||||||||||  |
seq2  TCACCCATATACTC-AAGTA-TCCTGTGCTTGAGGTAAGCACTTGAAAGC  146

seq1  TGTA-GCCATGGACCGAATCCCCTGAAACTGAGCTAAGCGAGTATTCCTT  198
      |||| |||||||||||||| |||||||| |||||||||||||||||||||
seq2  TGTAGGCCATGGACCGAAT-CCCTGAAA-TGAGCTAAGCGAGTATTCCTT  194

seq1  TAGGTTGCTTATGCCAGGCGTATGTCACAACTGACAGTATGAGAGAAGGA  248
      |  ||||||||||||||||||| | ||| |||||||||||||||||||||
seq2  TTAGTTGCTTATGCCAGGCGTAGGCCACCACTGACAGTATGAGAGAAGGA  244

seq1  GGGTGTTTCTGCCTGCCTGGATCTGTTATAGACGCTTACTCTATCTGCCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTTTCTGCCTGCCTGGATCTGTTATAGACGCTTACTCTATCTGCCT  294

seq1  TTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTAAATATATGTAGTTTT  348
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTGTTTGTTTGTTTGTTTGTTTG-TTGTTTGTTTAAATATATGTAGTTTT  343

seq1  ATGTACATGGATGTCTTCACTGCATGTATGTGTGAGCACCACATGTGGGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACATGGATGTCTTCACTGCATGTATGTGTGAGCACCACATGTGGGC  393

seq1  CTGGTGCCTGTGGAGGTCAGGAGAGGGCACTGAAATCCCTGGA-CCTGGA  447
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTGGTGCCTGTGGAGGTCAGGAGAGGGCACTGAAATCCCTGGACCCTGGA  443

seq1  GTCAAAATTGTTGCAAGCCATTGTGCAGATGCTGGAGAT-AAAAACCAGG  496
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTCAAAATTGTTGCAAGCCATTGTGCAGATGCTGGAGATAAAAAACCAGG  493

seq1  TTCTCTACAAGAGCAACAAGTGCTCTAAACCAGAGTGCTCTCTCCAGCCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTACAAGAGCAACAAGTGCTCTAAACCAGAGTGCTCTCTCCAGCCT  543

seq1  TGACTTTGGTTTTTCTTTACCACATCTGTGTTCCCTTTTTTTCACAGTGG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTGGTTTTTCTTTACCACATCTGTGTTCCCTTTTTTTCACAGTGG  593

seq1  CCGTGGGAAGGCCTCCTTGCAATCTTCTCTCCGGTATTAGATTCCTAATT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGGGAAGGCCTCCTTGCAATCTTCTCTCCGGTATTAGATTCCTAATT  643

seq1  ATCCTTTCCATCAGGTCTCAAGCGCAGTTGGGAACCGGAAGAGTCTATAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTCCATCAGGTCTCAAGCGCAGTTGGGAACCGGAAGAGTCTATAA  693

seq1  AGGAGACACCAACTCCAAGAATGCCTCATAAGTCTTCCTGTGGCCAGTTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGACACCAACTCCAAGAATGCCTCATAAGTCTTCCTGTGGCCAGTTC  743

seq1  CAAATCATGAAAAACCAGCAGCAGGGTAACTTGAAAGAAGAATGGCATGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCATGAAAAACCAGCAGCAGGGTAACTTGAAAGAAGAATGGCATGT  793

seq1  TCAGGAGACTGGTGGAGTTAACATTTCACCAGGAGCTAGTCTTATTCCCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGACTGGTGGAGTTAACATTTCACCAGGAGCTAGTCTTATTCCCT  843

seq1  GAATGCTAATTTACATATTCACTTAGTGACTAATAGATACCAGGCATAAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCTAATTTACATATTCACTTAGTGACTAATAGATACCAGGCATAAC  893

seq1  ATTCAGTACTGAGGAAGCAACTCAGGAAGTTTTCAGGGAGTGGCAGGTAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTACTGAGGAAGCAACTCAGGAAGTTTTCAGGGAGTGGCAGGTAG  943

seq1  TTAAACAAGCAGATCTAATACAGAGTATCTTCTCCCAGAAACACTGGTCC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAAGCAGATCTAATACAGAGTATCTTCTCCCAGAAACACTGGTCC  993

seq1  CTTCCCTTTTAGAAAAATAACGCTGGTTTTTCTCACTTGTTATTTCAGTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTTTTAGAAAAATAACGCTGGTTTTTCTCACTTGTTATTTCAGTG  1043

seq1  TTGAGAACAGGACTTGGAGTGAAGATTAAACCTCAAAGAAGGAGATTTCT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAACAGGACTTGGAGTGAAGATTAAACCTCAAAGAAGGAGATTTCT  1093

seq1  AAAGAAGTGAAATCTCTTGTAGAAATATCTGGAATTC  1133
      ||||||||||||||||||||||   ||||||||||||
seq2  AAAGAAGTGAAATCTCTTGTAG-TTTATCTGGAATTC  1129