BAC Information

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BAC

Clone NameB6Ng01-071E15
Chromosome13 (Build37)
Map Location 77,624,307 - 77,624,802
singlet/doubletsinglet
Overlap genenone
Upstream geneMctp1, LOC666603, EG666607, Ankrd32, 2210408I21Rik, LOC631139
Downstream geneLOC675063, D13Mgi7, 1110033M05Rik, 1700013G10Rik, Nr2f1, EG666856, LOC268676, LOC100042683, LOC622365, LOC100043052
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071E15.bB6Ng01-071E15.g
ACCDH889029DH889030
length293490
definitionDH889029|Mus musculus domesticus DNA, BAC clone: B6Ng01-071E15, 5' end.DH889030|Mus musculus domesticus DNA, BAC clone: B6Ng01-071E15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtttcatttttgtctgtatgacctgtcaattgatgagaatggg
gcatttgaagtctcccactatcagagtgtaaagatcagtatgtgatttaa
gctgtatttctgcaattctgacttgacttaaggtccactccatgggacag
taccaatatatgacattgcttgggtaaccaagaaccagagactagatagc
ctagatacctaggataaaaccaaacactgtgtgtgagtgtgtgcgtgtgc
gtgtgcacatgtgcgtgtgtgtgcgtgtgtgtgcgtgtgtgtg
aaggccagtctgggatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtccagagagagggagttggggggaggaagcaaatggggtaaatttac
tggcctgtattttgtatttaatcaagtgacttttaatctttggcatatga
gggagagctgagctctgagctaccgttacacttctaaagtgaacagaaaa
aggaagaaagattggaaaggaataagggaaaggagtagatggaataaagc
atgaagaaaaagtaggaagggaggaaaaggaagatgaaattgaaaaaact
caaattacttttttatttgaacctagaaattaaacatttggtttctctat
acataaactgtttaaagcattcattgcttatttctggagcaaaatatgaa
cctagcagcatgaatatttcttgagggagtcattaaacatccagaagtaa
tttttgttaaactacttatcaaatttggctatcagtaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_77624307_77624802
seq2: B6Ng01-071E15.g_64_559

seq1  GAATTCAAGGCCAGTCTGGGATGTGTGTGTGTGTGTGTGTGTGTGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCCAGTCTGGGATGTGTGTGTGTGTGTGTGTGTGTGTGTGT  50

seq1  GTGTGTGTGTCCAGAGAGAGGGAGTTGGGGGGAGGAAGCAAATGGGGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTCCAGAGAGAGGGAGTTGGGGGGAGGAAGCAAATGGGGTAA  100

seq1  ATTTACTGGCCTGTATTTTGTATTTAATCAAGTGACTTTTAATCTTTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTGGCCTGTATTTTGTATTTAATCAAGTGACTTTTAATCTTTGGC  150

seq1  ATATGAGGGAGAGCTGAGCTCTGAGCTACCGTTACACTTCTAAAGTGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGGGAGAGCTGAGCTCTGAGCTACCGTTACACTTCTAAAGTGAAC  200

seq1  AGAAAAAGGAAGAAAGATTGGAAAGGAATAAGGGAAAGGAGTAGATGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGGAAGAAAGATTGGAAAGGAATAAGGGAAAGGAGTAGATGGAA  250

seq1  TAAAGCATGAAGAAAAAGTAGGAAGGGAGGAAAAGGAAGATGAAATTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCATGAAGAAAAAGTAGGAAGGGAGGAAAAGGAAGATGAAATTGAA  300

seq1  AAAACTCAAATTACTTTTTTATTTGAACCTAGAAATTAAACATTTGGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCAAATTACTTTTTTATTTGAACCTAGAAATTAAACATTTGGTTT  350

seq1  CTCTATACATAAACTGCTTAAAGCATTCATTGCTCATTTCTGGAGCAAAA  400
      |||||||||||||||| ||||||||||||||||| |||||||||||||||
seq2  CTCTATACATAAACTGTTTAAAGCATTCATTGCTTATTTCTGGAGCAAAA  400

seq1  TATGAACCTAGCAGCATGAATATTTCTTGAGGGAGTCATTAAACATCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACCTAGCAGCATGAATATTTCTTGAGGGAGTCATTAAACATCCAG  450

seq1  AAGTAATTTCTGTTAAACTACTTATCAAATTTGGCTATCAGTAAAT  496
      ||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAGTAATTTTTGTTAAACTACTTATCAAATTTGGCTATCAGTAAAT  496