BAC Information

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BAC

Clone NameB6Ng01-071J04
Chromosome13 (Build37)
Map Location 8,495,321 - 8,584,394
singlet/doubletdoublet
Overlap geneAdarb2
Upstream geneLOC791083, LOC382722, EG666941
Downstream geneWdr37, LOC100039632, Idi1, EG382723, LOC100039655, Idi2, Gtpbp4, LOC667721, Larp5, EG667727, LOC100039719, Dip2c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071J04.bB6Ng01-071J04.g
ACCDH889234DH889235
length1,0981,128
definitionDH889234|Mus musculus domesticus DNA, BAC clone: B6Ng01-071J04, 5' end.DH889235|Mus musculus domesticus DNA, BAC clone: B6Ng01-071J04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,583,289 - 8,584,394)(8,495,321 - 8,496,084)
sequence
gaattctgctcttgctcttcaactcccctgctctaacccacccacaaatc
ttacattctgacttctatctgggcattgtttgcccagggaaccagagcta
ggatgagggagagaagccaaggaccacgaagctcgagagcaagcatccag
attccacatcgcacttgaacctcgctccggacttttcccattaccacgta
accttagtaggcaaagcagcactgtgcagagtctcggctccaacctgaga
ctctcattaggccacttccctagcctctgccatgggttcacagaagctca
gaaatgaatgtagcctaagtcaccactgtgccagagaggagacagaaagt
cttgactgcatctgcagagggagggagatctcaaaggggtgggatctccc
ctagatgccatctggggctaggaaggcaaaggcagccttggcacctcctc
tatgtgtattctttgtcacccccttctaggtctggtgactggggactctt
tcttttctcttggatcttcatcttttctttctccagctcatttacacgtt
ggcattctcccatttgccatcttctttctgctgtctctctccttttcagt
gtaacaatgaatcccaaaggaaggggctgcccacccatccccagaaagcc
tttctacgctagtgcagctgtagactttaagctgacaaaggcagccttct
caaatgggagcccttggcacactgccagcaccccactgctccacagaagc
accagcagaagcctggagagccaggaggatggtttttcatgggaattcat
ccacgagggcagctgagagctcagactttctccaggctccctcttgccca
agtaggcatgtaaggtttccacatattccaaagtcaacaacctgctggac
gatgacacccttgtgtgtgtgtgctgtacttcattgtctcctttctccct
gtctcctctgcagtctgcagactcagtcaaccctttctcttgtcagatca
cagtaacttttcttctgagctactagtaaatccctctagactgctcttat
taagtcatagatttcttttaaacacaagtgctcagtttcttcataagc

gaattccttacctggtgctgatattaattcctttgcaagtgcatgtttta
caagtcttttccatgatgattctcctttcaattttgattttaatgaggtt
caattttttcttttgtgttctgtacttttggtatcctaagaaaccactgt
caaattcaatgccataaaatgtttatcatgttttcttctaagactgtatt
tattatttgggggctcttaaattaagggtgtgtcttcactttcaagtaac
ttttatatatagcatgtggtaaaagtcatacttcattctttcacatatga
atatggatcttgggcagggatgcagggctgctgtgagttcatgtgtacca
gggccctgttgcatccaaaaggcattgtttctccaagtcctctccactct
tacaatatgaccccctttttcatgatcttcctgagccttgggaaaagaga
gtgagatggatgtcacctttgaggcttagcactccatagtctcttattct
cgctccatgctctgagtctctgtattaatcaccatttactgcataaggtt
ttctaatgagcatggtcactacactgatctatgggtatgaagctaaatac
ttagaaagcacttggattctatgtccatttagcaaaataacaatattgca
ctcttcccctagggcataaaacctccccggccacaggtttataataccgg
gagtgtgttctctcctgtggagcaatcttaaatccaatcagaaagctatt
gattaccaccataagattcatgatgctattgcaccaatgggcatatcttg
tcagggcagccattattgtaggtcatggtgttgacagttaggtaagagtg
ttgatgacttttcagcctgcataaattaaaccaaaattgctgtttggcag
tggcagagactttgactttgataaaggttggtctgccattgggccaggca
cctgccactctctacccaggggatggtgttcagcatctttgggtctgacc
ttagctctccattttttatactcaaagttttgtctgtttttcatacatgt
ggtttcattaatagctgagagtcatgcatctgtgatgatctaaaaaataa
aaaaaagagttcttcttagaaaatctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_8583289_8584394
seq2: B6Ng01-071J04.b_42_1139 (reverse)

seq1  GCTTATGAAAGAAACTGAGCACTTGTGGTTTAAAAGGAAATCTATGACTT  50
      ||||||| |||||||||||||||||| |||||||| ||||||||||||||
seq2  GCTTATG-AAGAAACTGAGCACTTGT-GTTTAAAA-GAAATCTATGACTT  47

seq1  AATAAGAGCAAGTCTAGAGGGATTTACTAGTAGCTCCAGAAGAAAAAGTT  100
      ||||||||| ||||||||||||||||||||||||| |||||| |||||||
seq2  AATAAGAGC-AGTCTAGAGGGATTTACTAGTAGCT-CAGAAG-AAAAGTT  94

seq1  ACTGTGATCTGACAAGAGGAAAGGGTTGACTGAGTCTGCAAGACTGCAGA  150
      ||||||||||||||||| ||||||||||||||||||||| ||||||||||
seq2  ACTGTGATCTGACAAGA-GAAAGGGTTGACTGAGTCTGC-AGACTGCAGA  142

seq1  GGAGACAGGGAGAAAGGAGACAATGAAGTACAGCACACACACACAAGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACAGGGAGAAAGGAGACAATGAAGTACAGCACACACACACAAGGGT  192

seq1  GTCATCGTCCAGCAGGTTGTTGACTTTGGAATATGTGGAAACCTTACATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCGTCCAGCAGGTTGTTGACTTTGGAATATGTGGAAACCTTACATG  242

seq1  CCTACTTGGGCAAGAGGGAGCCTGGAGAAAGTCTGAGCTCTCAGCTGCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTTGGGCAAGAGGGAGCCTGGAGAAAGTCTGAGCTCTCAGCTGCCC  292

seq1  TCGTGGATGAATTCCCATGAAAAACCATCCTCCTGGCTCTCCAGGCTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGGATGAATTCCCATGAAAAACCATCCTCCTGGCTCTCCAGGCTTCT  342

seq1  GCTGGTGCTTCTGTGGAGCAGTGGGGTGCTGGCAGTGTGCCAAGGGCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTGCTTCTGTGGAGCAGTGGGGTGCTGGCAGTGTGCCAAGGGCTCC  392

seq1  CATTTGAGAAGGCTGCCTTTGTCAGCTTAAAGTCTACAGCTGCACTAGCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGAGAAGGCTGCCTTTGTCAGCTTAAAGTCTACAGCTGCACTAGCG  442

seq1  TAGAAAGGCTTTCTGGGGATGGGTGGGCAGCCCCTTCCTTTGGGATTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGGCTTTCTGGGGATGGGTGGGCAGCCCCTTCCTTTGGGATTCAT  492

seq1  TGTTACACTGAAAAGGAGAGAGACAGCAGAAAGAAGATGGCAAATGGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACACTGAAAAGGAGAGAGACAGCAGAAAGAAGATGGCAAATGGGAG  542

seq1  AATGCCAACGTGTAAATGAGCTGGAGAAAGAAAAGATGAAGATCCAAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCAACGTGTAAATGAGCTGGAGAAAGAAAAGATGAAGATCCAAGAG  592

seq1  AAAAGAAAGAGTCCCCAGTCACCAGACCTAGAAGGGGGTGACAAAGAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAGAGTCCCCAGTCACCAGACCTAGAAGGGGGTGACAAAGAATA  642

seq1  CACATAGAGGAGGTGCCAAGGCTGCCTTTGCCTTCCTAGCCCCAGATGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGAGGAGGTGCCAAGGCTGCCTTTGCCTTCCTAGCCCCAGATGGC  692

seq1  ATCTAGGGGAGATCCCACCCCTTTGAGATCTCCCTCCCTCTGCAGATGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGGGAGATCCCACCCCTTTGAGATCTCCCTCCCTCTGCAGATGCA  742

seq1  GTCAAGACTTTCTGTCTCCTCTCTGGCACAGTGGTGACTTAGGCTACATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGACTTTCTGTCTCCTCTCTGGCACAGTGGTGACTTAGGCTACATT  792

seq1  CATTTCTGAGCTTCTGTGAACCCATGGCAGAGGCTAGGGAAGTGGCCTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTGAGCTTCTGTGAACCCATGGCAGAGGCTAGGGAAGTGGCCTAA  842

seq1  TGAGAGTCTCAGGTTGGAGCCGAGACTCTGCACAGTGCTGCTTTGCCTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTCTCAGGTTGGAGCCGAGACTCTGCACAGTGCTGCTTTGCCTAC  892

seq1  TAAGGTTACGTGGTAATGGGAAAAGTCCGGAGCGAGGTTCAAGTGCGATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTTACGTGGTAATGGGAAAAGTCCGGAGCGAGGTTCAAGTGCGATG  942

seq1  TGGAATCTGGATGCTTGCTCTCGAGCTTCGTGGTCCTTGGCTTCTCTCCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATCTGGATGCTTGCTCTCGAGCTTCGTGGTCCTTGGCTTCTCTCCC  992

seq1  TCATCCTAGCTCTGGTTCCCTGGGCAAACAATGCCCAGATAGAAGTCAGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTAGCTCTGGTTCCCTGGGCAAACAATGCCCAGATAGAAGTCAGA  1042

seq1  ATGTAAGATTTGTGGGTGGGTTAGAGCAGGGGAGTTGAAGAGCAAGAGCA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGATTTGTGGGTGGGTTAGAGCAGGGGAGTTGAAGAGCAAGAGCA  1092

seq1  GAATTC  1106
      ||||||
seq2  GAATTC  1098


seq1: chr13_8495321_8496084
seq2: B6Ng01-071J04.g_441_1193

seq1  TGTTTCTCCAAGTCCTCTCCACTCTTACAATATGACCCCCTTTTTCATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCCAAGTCCTCTCCACTCTTACAATATGACCCCCTTTTTCATGA  50

seq1  TCTTCCTGAGCCTTGGGAAAAGAGAGTGAGATGGATGTCACCTTTGAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTGAGCCTTGGGAAAAGAGAGTGAGATGGATGTCACCTTTGAGGC  100

seq1  TTAGCACTCCATAGTCTCTTATTCTCGCTCCATGCTCTGAGTCTCTGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCACTCCATAGTCTCTTATTCTCGCTCCATGCTCTGAGTCTCTGTAT  150

seq1  TAATCACCATTTACTGCATAAGGTTTTCTAATGAGCATGGTCACTACACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACCATTTACTGCATAAGGTTTTCTAATGAGCATGGTCACTACACT  200

seq1  GATCTATGGGTATGAAGCTAAATACTTAGAAAGCACTTGGATTCTATGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTATGGGTATGAAGCTAAATACTTAGAAAGCACTTGGATTCTATGTC  250

seq1  CATTTAGCAAAATAACAATATTGCACTCTTCCCCTAGGGCATAAAACCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAGCAAAATAACAATATTGCACTCTTCCCCTAGGGCATAAAACCTC  300

seq1  CCCGGCCACAGGTTTATAATACCGGGAGTGTGTTCTCTCCTGTGGAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGCCACAGGTTTATAATACCGGGAGTGTGTTCTCTCCTGTGGAGCAA  350

seq1  TCTTAAATCCAATCAGAAAGCTATTGATTACCACCATAAGATTCATGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAATCCAATCAGAAAGCTATTGATTACCACCATAAGATTCATGATG  400

seq1  CTATTGCACCAATGGGCATATCTTGTCAGGGCAGCCATTATTGTAGGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGCACCAATGGGCATATCTTGTCAGGGCAGCCATTATTGTAGGTCA  450

seq1  TGGTGTTGACAGTTAGGTAAGAGTGTTGATGACTTTTCAGCCTGCATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTGACAGTTAGGTAAGAGTGTTGATGACTTTTCAGCCTGCATAAA  500

seq1  TTAAACCAAAATTTGCTGTTTGGCAGTGGCAGAGACTTTGACTTTGATAA  550
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTAAACCAAAA-TTGCTGTTTGGCAGTGGCAGAGACTTTGACTTTGATAA  549

seq1  AGGTTGGTCTGCCATTGGGCCAGGCACCTGCCACTCTCTACCCAGGGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGGTCTGCCATTGGGCCAGGCACCTGCCACTCTCTACCCAGGGGAT  599

seq1  GGTGTTCAGCATCTTTGGGTCTTGACCTTAGCTCTCCCATTTTTTATAAC  650
      ||||||||||||||||||||| ||||||||||||| ||||||||||| ||
seq2  GGTGTTCAGCATCTTTGGGTC-TGACCTTAGCTCT-CCATTTTTTAT-AC  646

seq1  TCAAAGTTTTGTTCTGTTTTTCATACATGTGGTTTTCATTAAATAGCTGA  700
      ||||||||||| |||||||||||||||||||| ||||||| |||||||||
seq2  TCAAAGTTTTG-TCTGTTTTTCATACATGTGG-TTTCATT-AATAGCTGA  693

seq1  GAGTCAATGCCATCTGTGATGAATCTAAAAAAATAAAAAAAGAGTCTTTC  750
      ||||| ||| ||||||||||| ||||||||||  |||||||||||  |||
seq2  GAGTC-ATG-CATCTGTGATG-ATCTAAAAAATAAAAAAAAGAGTTCTTC  740

seq1  TTAGAAAAATCTGA  764
      |||| |||||||||
seq2  TTAG-AAAATCTGA  753


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