BAC Information

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BAC

Clone NameB6Ng01-072I05
Chromosome13 (Build37)
Map Location 12,972,753 - 12,973,995
singlet/doubletsinglet
Overlap genenone
Upstream geneRyr2, LOC100039678, Mtr, LOC100039826, Actn2, EG432725, Heatr1, LOC546246, Lgals8, LOC100039900, Edaradd, Ero1lb, LOC664862, EG238507, LOC100039744, EG630757, Prl2c3, LOC100039999
Downstream geneLOC100039754, Prl2c2, LOC434483, LOC674723, Prl2c5, LOC630611, LOC100039786, LOC385049, LOC630663, LOC100040108, Gpr137b, LOC664960, Nid1, Lyst, LOC100039831, Gng4, EG665000
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072I05.bB6Ng01-072I05.g
ACCDH889912DH889913
length1,2181,131
definitionDH889912|Mus musculus domesticus DNA, BAC clone: B6Ng01-072I05, 5' end.DH889913|Mus musculus domesticus DNA, BAC clone: B6Ng01-072I05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacttccacgatgcttcagggacaagaaactgtgaaccagagaa
ctttgagtccttactctcctcagggctggtagtgtccagattgttcgggt
atcagctgaggacagggagcacaggcatgcattcgatgaagactcctgct
ttgaacttcagctaaacgttctcattgaaacaagtgtcttcagaaaaaaa
aaaacaatgcctgagagcaattgtatcctgaggtaacctgcttttggacc
tcttcaaacacttgacttgctggcatcgagagggtgggacattcagggaa
attagtctggcttgctgaatcaaagaagggctccaatgacaggcacagaa
agattctcagcttgagacacaccttggtttttagaaaaattagatcaaag
aaagttgagtagtggaagcagccagaacagagtcttcaagacaagaggtc
ctctgggccttaatatagatccagaggaagccaaacaggaaaaataatgt
aggtgtcttaggctaagaaccccattgtgacatccatccatccatcaggt
aattggttcctgaaactgacccttagggagacctgctacttggagccatg
tgaaaagcatgaggtgaaaggacaataaaagcgagaagcacttaggttag
ggccagcagtagtcacaagaagcagaacttctctcttgaggccacagagg
tgtaactcatgggaatgttgaggcctgggaggtggggtcaccaggcccag
gactttcctggcttatggtgggagaagttggaatgagaactgctctactc
cctggcctttggcagagcagaacccatttagaaaatgtttattctcttaa
agaagtggggccatatgaactttttaaacagacttttaaaaaagctattc
aactggggagtctttggcttctgtctgccacatctgtatctctgtgtttc
cccttttttctctttcttctctatgctcagctcagaccctaagcgtggaa
agaatatgacagaaataagtatttagcatttaaaataataaagttagatt
gtccaataagaaaagctattattcatcttcattaaataatgtgaagttat
ataagggtaaatggcatcgtcacttacttagcttctctgtatgacctgtc
atatagagcaatttggcttttgtcactgcatggtagtggaacataccact
cctgatctaggacagagc
gaattctgtactgggatttttttctttctttttctttcttcttctttttt
tttttttttttgagggggagactttttatactgcttccattttttaatag
ttatatctttatttaaattgtttctctggtcttgatttaactttggtaag
tagtatctattgagaaaataaaccatttcttttagattttctagttttgt
agagtacaggtttttgaactatgacaaaatgattctttggatttacccag
tgtctattgttatgcctcacttttcctttctgattttgccaattttggta
ctttttctctgccttttaattagttttcataataatctgtcagtcttgtg
gattttattttttaaaaatattttattgtatttatctattttacactcca
cattttattccctcttagttcacccacgccccaccccacccctgtctcca
tgagaatgtccccatctccataccaccagacctctaaactccctgaggcc
tacagtctcttgaggattaggtacatcttctctgactgaacaaagaccca
gcagccctctaatgtatatgagttgggggcctcatatcacctggttggtg
gtccagtgtctgagagatctcagagatccagattaattgagactgctggt
cctcctacaaggtcaccctcttctcctcagctctttccagcttttctcta
attcaaccacagttgtctgcagcttctgtccattggttgggtacaaatat
ctacatcagactcttttagctgcttgttgattttcttaaagaaccaatta
tttatttcgttgagttttgtattgttctctttgtttctgttctttttttt
aattcccaccctcagtttgattattttctgccatctcttggatgtgtcac
ttcttttttagggtttttagcttcatataagttgctagtatgagatcacc
ccagtttcttcatgaattaatttagggctatgactttctcttagtactgc
ttcattgtggtccaaaactttggagtatatgtggcatcatttcaatgacc
ataaaggagcctttattctttattttccacttgtgaccctggagccattt
ggaagaaggtggtccacttccgaagttacgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_12972753_12973995
seq2: B6Ng01-072I05.b_46_1263

seq1  GAATTCTACTTCCACGATGCTTCAGGGACAAGAAACTGTGAACCAGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTTCCACGATGCTTCAGGGACAAGAAACTGTGAACCAGAGAA  50

seq1  CTTTGAGTCCTTACTCTCCTCAGGGCTGGTAGTGTCCAGATTGTTCGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGTCCTTACTCTCCTCAGGGCTGGTAGTGTCCAGATTGTTCGGGT  100

seq1  ATCAGCTGAGGACAGGGAGCACAGGCATGCATTCGATGAAGACTCCTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTGAGGACAGGGAGCACAGGCATGCATTCGATGAAGACTCCTGCT  150

seq1  TTGAACTTCAGCTAAACGTTCTCATTGAAACAAGTGTCTTCAGAAAAAAA  200
      |||||||||||||||||||||||||||||||||||||||||||  |||||
seq2  TTGAACTTCAGCTAAACGTTCTCATTGAAACAAGTGTCTTCAG--AAAAA  198

seq1  AAAAAACAATGCCTGAGAGCAATTGTATCCTGAGGTAACCTGCTTTTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACAATGCCTGAGAGCAATTGTATCCTGAGGTAACCTGCTTTTGGA  248

seq1  CCTCTTCAAACACTTGACTTGCTGGCATCGAGAGGGTGGGACATTCAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCAAACACTTGACTTGCTGGCATCGAGAGGGTGGGACATTCAGGG  298

seq1  AAATTAGTCTGGCTTGCTGAATCAAAGAAGGGCTCCAATGACAGGCACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGTCTGGCTTGCTGAATCAAAGAAGGGCTCCAATGACAGGCACAG  348

seq1  AAAGATTCTCAGCTTGAGACACACCTTGGTTTTTAGAAAAATTAGATCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTCTCAGCTTGAGACACACCTTGGTTTTTAGAAAAATTAGATCAA  398

seq1  AGAAAGTTGAGTAGTGGAAGCAGCCAGAACAGAGTCTTCAAGACAAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTTGAGTAGTGGAAGCAGCCAGAACAGAGTCTTCAAGACAAGAGG  448

seq1  TCCTCTGGGCCTTAATATAGATCCAGAGGAAGCCAAACAGGAAAAATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGGGCCTTAATATAGATCCAGAGGAAGCCAAACAGGAAAAATAAT  498

seq1  GTAGGTGTCTTAGGCTAAGAACCCCATTGTGACATCCATCCATCCATCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTGTCTTAGGCTAAGAACCCCATTGTGACATCCATCCATCCATCAG  548

seq1  GTAATTGGTTCCTGAAACTGACCCTTAGGGAGACCTGCTACTTGGAGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTGGTTCCTGAAACTGACCCTTAGGGAGACCTGCTACTTGGAGCCA  598

seq1  TGTGAAAAGCATGAGGTGAAAGGACAATAAAAGCGAGAAGCACTTAGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAAGCATGAGGTGAAAGGACAATAAAAGCGAGAAGCACTTAGGTT  648

seq1  AGGGCCAGCAGTAGTCACAAGAAGCAGAACTTCTCTCTTGAGGCCACAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCAGCAGTAGTCACAAGAAGCAGAACTTCTCTCTTGAGGCCACAGA  698

seq1  GGTGTAACTCATGGGAATGTTGAGGCCTGGGAGGTGGGGTCACCAGGCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAACTCATGGGAATGTTGAGGCCTGGGAGGTGGGGTCACCAGGCCC  748

seq1  AGGACTTTCCTGGCTTATGGTGGGAGAAGTTGGAATGAGAACTGCTCTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTTTCCTGGCTTATGGTGGGAGAAGTTGGAATGAGAACTGCTCTAC  798

seq1  TCCCTGGCCTTTGGCAGAGCAGAACCCATTTAGAAAATGTTTATTCTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGCCTTTGGCAGAGCAGAACCCATTTAGAAAATGTTTATTCTCTT  848

seq1  AAAGAAGTGGGGCCATATGAACTTTTTAAACAGACTTTTAAAAAAGCTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGTGGGGCCATATGAACTTTTTAAACAGACTTTTAAAAAAGCTAT  898

seq1  TCAACTGGGGAGTCTTTGGCTTCTGTCTGCCACATCTGTATCTCTTGTGT  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCAACTGGGGAGTCTTTGGCTTCTGTCTGCCACATCTGTATCTC-TGTGT  947

seq1  TTCCCCTTTTTTCTCTTTCTTCTCTATTGCTCAAGCTCAGACCCTAAGCG  1000
      |||||||||||||||||||||||||| ||||| |||||||||||||||||
seq2  TTCCCCTTTTTTCTCTTTCTTCTCTA-TGCTC-AGCTCAGACCCTAAGCG  995

seq1  TTGTACAGAATATGACAGATATAAGTATTTAGCATTTAAAATAATAAAGT  1050
       || | ||||||||||||| ||||||||||||||||||||||||||||||
seq2  -TGGAAAGAATATGACAGAAATAAGTATTTAGCATTTAAAATAATAAAGT  1044

seq1  TAGATTGTTCCAATAAGAAAAGCTATTATTCATCTTTCTTTTTTATTTAT  1100
      ||||||| ||||||||||||||||||||||||    ||||  |||  || 
seq2  TAGATTG-TCCAATAAGAAAAGCTATTATTCA----TCTTCATTAAATAA  1089

seq1  TGTTGAG-TATAATAGGGTAAATGGGCATCGTCACCTTACTTAGC-TCTC  1148
      |||  || ||||  ||||||||| |||||||||| |||||||||| ||||
seq2  TGTGAAGTTATATAAGGGTAAAT-GGCATCGTCA-CTTACTTAGCTTCTC  1137

seq1  TGTAATGAACTGTCATTATCAGGGAGGCATTTTGC-TTTGTCACCTGCAA  1197
      ||| |||| |||||||    |  |||  |||| || ||||||| ||||| 
seq2  TGT-ATGACCTGTCAT----ATAGAGCAATTTGGCTTTTGTCA-CTGCA-  1180

seq1  TAGGTGAGTGGAGAACAATTCACATCCTCTGATCTAGGACCAGAGC  1243
        ||| ||||  |||||   ||| ||  ||||||||||| ||||||
seq2  -TGGT-AGTG--GAACATACCAC-TC--CTGATCTAGGA-CAGAGC  1218