BAC Information

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BAC

Clone NameB6Ng01-073K10
Chromosome13 (Build37)
Map Location 109,863,551 - 109,997,432
singlet/doubletdoublet
Overlap genePde4d, LOC100040968
Upstream geneNdufa12l, Ercc8, LOC668123, LOC621498, Elovl7, LOC668129, LOC100040524, Depdc1b, EG668144, LOC621663
Downstream geneLOC100040577, Rab3c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073K10.bB6Ng01-073K10.g
ACCDH890714DH890715
length767662
definitionDH890714|Mus musculus domesticus DNA, BAC clone: B6Ng01-073K10, 5' end.DH890715|Mus musculus domesticus DNA, BAC clone: B6Ng01-073K10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,996,676 - 109,997,432)(109,863,551 - 109,864,211)
sequence
gaattcttcaagagcattctttttttttttttttttttaagatttattta
tttattatatgtaagcctctttgtgtgtagcattgttaatccactcataa
gaattctctttgtgctcatttcttggagaaaaaagtgacggagaaaaggc
agagaaggttcaagccaccatcccactaatagccatgtgaacgaggcagt
taacatgacagcagacatctagccaggtgtggcaagacatttctgtcatc
tcagtgcttaggaggtagaggtaggcggacctctctgagtctgaggcctg
cgtggtctacataacgaattccaagacagccaaccaaggccatactggga
gacttcatcgttaaaaactaaaaataataaataaataaatagattttaaa
aagtaataaatagatgttgatagaagcattgatcattttatccaatgtta
caaacagaaatcctaattcttctgctcttcttgggaatattagtgttgat
gttggctattggtgatgctattttacaacacggcagcctgtacttccact
tgcatttaccctaaataggctctgtcctggggggagacagggaagagacc
ctaggatgccctttctacacagggctgcgagtcaagatctatcatgggtt
cgaatacgttcccttctctgtcaccagaaccatttcgtgatggagtttca
atgaggtcataagggtggggtattcatttgccaggacacagtctcacaga
cacacactgcacacaca
gaattctacttatcaaataggatagccctaaagagcttagattctgggct
ttgcttctcctaaccagatggccttgtgaagacagctagtttatttgacc
cttagttttcctgtctaagtggagaccatcacagtgctgagtctccctgg
gagctgctgtgtagattagagaagatgtgtatgcaaccgtgcctggggct
ttgtcagccttccattcctgctgtttacctcttccttggagcaagccaga
gcctcagggatttgcattagcaaatgaaaaacagtgcttccagaaaaccc
ttgaaccctatagagaagcaaataaagcaatttctccccaaacacaggtc
tctaatcttgccctcccaatcccttcttactttcgatttagaattaggag
acaggagctttgtccattgtgggtttttttttttctttccaaaatggaca
tttaaatgtctgttgtttcaaaaacaaacaaacaaaaaagcaataaataa
ataaataaaccaaaaacaaaacaaaaaaaaacaaatgaaattcctagggt
tcaccctctccctataaacatcttatttaactctttaaaataagagctgg
ttgtaactactactatgcagtgaaaacagagagagggttttttattgcgg
gggggggggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_109996676_109997432
seq2: B6Ng01-073K10.b_33_799 (reverse)

seq1  --TGTGT---GTGTGTGTGTGTG----TGTGTCCTGGCAAATGAATACCC  41
        |||||   |||||||| ||||    |||||||||||||||||||||||
seq2  TGTGTGTGCAGTGTGTGTCTGTGAGACTGTGTCCTGGCAAATGAATACCC  50

seq1  CACCCTTATGACCTCATTGAAACTCCATCACG-AATGGTTCTGGTGACAG  90
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CACCCTTATGACCTCATTGAAACTCCATCACGAAATGGTTCTGGTGACAG  100

seq1  AGAAGGGAACGTATTCGAACCCATGATAGATCTTGACTCGCAGCCCTGTG  140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGGAACGTATTCGAACCCATGATAGATCTTGACTCGCAGCCCTGTG  150

seq1  TAGAAAGGGCATCCTAGGGTCTCTTCCCTGTCTCCCCCCAGGACAGAGCC  190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGGGCATCCTAGGGTCTCTTCCCTGTCTCCCCCCAGGACAGAGCC  200

seq1  TATTTAGGGTAAATGCAAGTGGAAGTACAGGCTGCCGTGTTGTAAAATAG  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGGGTAAATGCAAGTGGAAGTACAGGCTGCCGTGTTGTAAAATAG  250

seq1  CATCACCAATAGCCAACATCAACACTAATATTCCCAAGAAGAGCAGAAGA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCAATAGCCAACATCAACACTAATATTCCCAAGAAGAGCAGAAGA  300

seq1  ATTAGGATTTCTGTTTGTAACATTGGATAAAATGATCAATGCTTCTATCA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGATTTCTGTTTGTAACATTGGATAAAATGATCAATGCTTCTATCA  350

seq1  ACATCTATTTATTACTTTTTAAAATCTATTTATTTATTTATTATTTTTAG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTATTTATTACTTTTTAAAATCTATTTATTTATTTATTATTTTTAG  400

seq1  TTTTTAACGATGAAGTCTCCCAGTATGGCCTTGGTTGGCTGTCTTGGAAT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAACGATGAAGTCTCCCAGTATGGCCTTGGTTGGCTGTCTTGGAAT  450

seq1  TCGTTATGTAGACCACGCAGGCCTCAGACTCAGAGAGGTCCGCCTACCTC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTATGTAGACCACGCAGGCCTCAGACTCAGAGAGGTCCGCCTACCTC  500

seq1  TACCTCCTAAGCACTGAGATGACAGAAATGTCTTGCCACACCTGGCTAGA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCTAAGCACTGAGATGACAGAAATGTCTTGCCACACCTGGCTAGA  550

seq1  TGTCTGCTGTCATGTTAACTGCCTCGTTCACATGGCTATTAGTGGGATGG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCTGTCATGTTAACTGCCTCGTTCACATGGCTATTAGTGGGATGG  600

seq1  TGGCTTGAACCTTCTCTGCCTTTTCTCCGTCACTTTTTTCTCCAAGAAAT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGAACCTTCTCTGCCTTTTCTCCGTCACTTTTTTCTCCAAGAAAT  650

seq1  GAGCACAAAGAGAATTCTTATGAGTGGATTAACAATGCTACACACAAAGA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACAAAGAGAATTCTTATGAGTGGATTAACAATGCTACACACAAAGA  700

seq1  GGCTTACATATAATAAATAAATAAATCTTAAAAAAAAAAAAAAAAAAAGA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTACATATAATAAATAAATAAATCTTAAAAAAAAAAAAAAAAAAAGA  750

seq1  ATGCTCTTGAAGAATTC  757
      |||||||||||||||||
seq2  ATGCTCTTGAAGAATTC  767

seq1: chr13_109863551_109864211
seq2: B6Ng01-073K10.g_72_733

seq1  GAATTCTACTTAGCAAATAGGATAGCCCTAAAGAGCTTAGATTCTGGGCT  50
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTTATCAAATAGGATAGCCCTAAAGAGCTTAGATTCTGGGCT  50

seq1  TTGCTTCTCCTAACCAGATGGCCTTGTGAAGACAGCTAGTTTATTTGACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCTCCTAACCAGATGGCCTTGTGAAGACAGCTAGTTTATTTGACC  100

seq1  CTTAGTTTTCCTGTCTAAGTGGAGACCATCACAGTGCTGAGTCTCCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTTTTCCTGTCTAAGTGGAGACCATCACAGTGCTGAGTCTCCCTGG  150

seq1  GAGCTGCTGTGTAGATTAGAGAAGATGTGTATGCAACCGTGCCTGGGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGCTGTGTAGATTAGAGAAGATGTGTATGCAACCGTGCCTGGGGCT  200

seq1  TTGTCAGCCTTCCATTCCTGCTGTTTACCTCTTCCTTGGAGCAAGCCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGCCTTCCATTCCTGCTGTTTACCTCTTCCTTGGAGCAAGCCAGA  250

seq1  GCCTCAGGGATTTGCATTAGCAAATGAAAAACAGTGCTTCCAGAAAACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGGGATTTGCATTAGCAAATGAAAAACAGTGCTTCCAGAAAACCC  300

seq1  TTGAACCCTATAGAGAAGCAAATAAAGCAATTTCTCCCCAAACACAGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACCCTATAGAGAAGCAAATAAAGCAATTTCTCCCCAAACACAGGTC  350

seq1  TCTAATCTTGCCCTCCCAATCCCTTCTTACTTTCGATTTAGAATTAGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATCTTGCCCTCCCAATCCCTTCTTACTTTCGATTTAGAATTAGGAG  400

seq1  ACAGGAGCTTTGTCCATTGTGGGTTTTTTTTTTTCTTTCCAAAATGGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGCTTTGTCCATTGTGGGTTTTTTTTTTTCTTTCCAAAATGGACA  450

seq1  TTTAAATGTCTGTTGTTTCAAAAACAAACAAACAAAAAAGCAATAAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATGTCTGTTGTTTCAAAAACAAACAAACAAAAAAGCAATAAATAA  500

seq1  ATAAATAAACCAAAAACAAAACAAAAAAAAACAAATGAAATTCCTAGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAACCAAAAACAAAACAAAAAAAAACAAATGAAATTCCTAGGGT  550

seq1  TCACCCTCTCCCTATAAACATCTTATTTAACTCTTTAAAATAAGAGCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCTCTCCCTATAAACATCTTATTTAACTCTTTAAAATAAGAGCTGG  600

seq1  TTGTAACTACTACTATGCAGTG-AAACAGAGAGAGGGTTTTTTATTGCGG  649
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTGTAACTACTACTATGCAGTGAAAACAGAGAGAGGGTTTTTTATTGCGG  650

seq1  GGGGGGGGGAGG  661
      ||||||||||||
seq2  GGGGGGGGGAGG  662