BAC Information

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BAC

Clone NameB6Ng01-073N04
Chromosome13 (Build37)
Map Location 73,628,046 - 73,629,025
singlet/doubletsinglet
Overlap geneAytl2
Upstream geneIrx2, LOC621486, Irx4, LOC100042864, Ndufs6, Mrpl36
Downstream geneSlc6a3, Clptm1l, Tert, Slc6a18, Slc6a19, Slc12a7, Nkd2, EG666360, Trip13, Brd9, Zdhhc11, LOC100042909, 2900041A09Rik, LOC621824, Cep72, Slc9a3, Exoc3, Ahrr, Pdcd6, Sdha, Ccdc127, AI595366, Zfp72, LOC666670, LOC634386, LOC100042547, LOC666683, LOC547136, BC012278
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073N04.bB6Ng01-073N04.g
ACCDH890838DH890839
length9801,098
definitionDH890838|Mus musculus domesticus DNA, BAC clone: B6Ng01-073N04, 5' end.DH890839|Mus musculus domesticus DNA, BAC clone: B6Ng01-073N04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagagaaacctctaaaatcttgaggtatgttttgcctgagagatg
tgcagaagaaaggacatggctaccattatgaactaccaagcactgatccc
tctgatctggccctgatccaagtgcctttcctagacgtaaccacagaaat
agcctgctgtcaatttggcagggttatgaggaaatgtttctcacacttat
ctaagggcactagatttttcagatgtgcctgcaacctaaaacatgtcctt
gctttcatcttttttcctttcctgagcaggcactctccccgttgcatatg
gaaacattaaggaactggctcatggccatggggaagcaggtggtgaggga
ggctagaacctaggcagatggcaaacaaggtccttagccccagaccaaca
cagacatcccttcccccaacacaactgtgacttttcagaggcatctggcc
gtggctaaatccactgcaaacatggccttcacagcctatgtgcttttttt
actcgggaggtgtcgtcatgcccacccacgggaaatgtgagttttcacca
tgcgctcaggcaacactgtggtcagtatcctaagcacatccaagactcac
agaccctgggtgaattcctttcatccacaagatgctggtacccagttgac
ttgtgtagaggtaaagaaaccagattggggcttgacaagtggtttgtggt
ttgtatggagtattagatgggagtgtctcatctttgtcaagcatttgtat
cagtcccctgatctagatagcccgggaccttgcagagaggcccatcaaga
aggcaaaaaggtgggactgtgtgtatctttttgcacctgtgagtggtaca
gcacagatccctatagacagaaatgagcagcccagtgtaagacatcagtt
aatgaaacactctgagcaagcagggtactcccttcttgacatagtccctg
gagagaattgactgtctgggctatagatct
gaattcattgaccttcaggtacagaacttagcattacaatacacagcaac
agagcaaacctcatcaagttaccacacttgatatattttctaattctctc
cccttacctccaaatttcacaatttcctttttttttctttacagccgaat
aatatttcattgtgtatatgtaccacattttcattatccatttttctgtt
caaagacacgtaggtcctaatctccatttcctagctatgtgtaatagagt
agtaatgaacatggccatgcaggtatctgtgaagaagaatactgaatccc
ttgggcatgtgacaagcagtgatataagtggatcatgtgtatgacagatt
tatttttagatttttgataattttctatattgatttctacagttgctaca
ccgtttataacctacagcaaaagcagatggttttgcccacacccgcacca
gcgtttgctgttgtttactgaccttagctgttttgaccagggtgagataa
aatttcaaagttgttctcattttcattttctgaattgctaggaatgatga
acatctttggtttttaaaagccaatcttagttcttcttttgagaactctg
atcagatcatatccacagctcatattctggatggttcatttgtcttcaga
ctctttgatttcacaattctgtacatggtgtggggtattcatcctactgg
atgtataactagaagattcaccctcactgtcgccttcctttcctcttgac
tgtttccttagctctgcagaagcatattcgttttatgaggtcccacctgt
cagttgttgactgtaattcctgggcaaatgtagtcctattgagaaagccc
ttgtctacacattttatcttgtagaatagggcctatggtttttcttctag
cagtttcagcttcatattgaggttttggatagccttggctgtcctgagct
cactcttgtagtcaggctggcctaaaactcgaagaggctgctgcttttgc
tccaaatgctaggataaggactttaagaaaccactgctgacagtactttt
ttgttctggctttcattttccgaaaatgtagggggtttatatagcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_73628046_73629025
seq2: B6Ng01-073N04.b_46_1025

seq1  GAATTCAGAGAAACCTCTAAAATCTTGAGGTATGTTTTGCCTGAGAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGAAACCTCTAAAATCTTGAGGTATGTTTTGCCTGAGAGATG  50

seq1  TGCAGAAGAAAGGACATGGCTACCATTATGAACTACCAAGCACTGATCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAGAAAGGACATGGCTACCATTATGAACTACCAAGCACTGATCCC  100

seq1  TCTGATCTGGCCCTGATCCAAGTGCCTTTCCTAGACGTAACCACAGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATCTGGCCCTGATCCAAGTGCCTTTCCTAGACGTAACCACAGAAAT  150

seq1  AGCCTGCTGTCAATTTGGCAGGGTTATGAGGAAATGTTTCTCACACTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCTGTCAATTTGGCAGGGTTATGAGGAAATGTTTCTCACACTTAT  200

seq1  CTAAGGGCACTAGATTTTTCAGATGTGCCTGCAACCTAAAACATGTCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGGCACTAGATTTTTCAGATGTGCCTGCAACCTAAAACATGTCCTT  250

seq1  GCTTTCATCTTTTTTCCTTTCCTGAGCAGGCACTCTCCCCGTTGCATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCATCTTTTTTCCTTTCCTGAGCAGGCACTCTCCCCGTTGCATATG  300

seq1  GAAACATTAAGGAACTGGCTCATGGCCATGGGGAAGCAGGTGGTGAGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATTAAGGAACTGGCTCATGGCCATGGGGAAGCAGGTGGTGAGGGA  350

seq1  GGCTAGAACCTAGGCAGATGGCAAACAAGGTCCTTAGCCCCAGACCAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGAACCTAGGCAGATGGCAAACAAGGTCCTTAGCCCCAGACCAACA  400

seq1  CAGACATCCCTTCCCCCAACACAACTGTGACTTTTCAGAGGCATCTGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATCCCTTCCCCCAACACAACTGTGACTTTTCAGAGGCATCTGGCC  450

seq1  GTGGCTAAATCCACTGCAAACATGGCCTTCACAGCCTATGTGCTTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTAAATCCACTGCAAACATGGCCTTCACAGCCTATGTGCTTTTTTT  500

seq1  ACTCGGGAGGTGTCGTCATGCCCACCCACGGGAAATGTGAGTTTTCACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGGGAGGTGTCGTCATGCCCACCCACGGGAAATGTGAGTTTTCACCA  550

seq1  TGCGCTCAGGCAACACTGTGGTCAGTATCCTAAGCACATCCAAGACTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCTCAGGCAACACTGTGGTCAGTATCCTAAGCACATCCAAGACTCAC  600

seq1  AGACCCTGGGTGAATTCCTTTCATCCACAAGATGCTGGTACCCAGTTGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTGGGTGAATTCCTTTCATCCACAAGATGCTGGTACCCAGTTGAC  650

seq1  TTGTGTAGAGGTAAAGAAACCAGATTGGGGCTTGACAAGTGGTTTGTGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTAGAGGTAAAGAAACCAGATTGGGGCTTGACAAGTGGTTTGTGGT  700

seq1  TTGTATGGAGTATTAGATGGGAGTGTCTCATCTTTGTCAAGCATTTGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATGGAGTATTAGATGGGAGTGTCTCATCTTTGTCAAGCATTTGTAT  750

seq1  CAGTCCCCTGATCTAGATAG-CCAGGACCTTGCAGAGAGG-CCAGCAAGA  798
      |||||||||||||||||||| || |||||||||||||||| ||| |||||
seq2  CAGTCCCCTGATCTAGATAGCCCGGGACCTTGCAGAGAGGCCCATCAAGA  800

seq1  AGGC-AAAAGGTGGGACTGTGTGTAGC-TTTTGCACCTGTGAGTGGTACA  846
      |||| |||||||||||||||||||| | ||||||||||||||||||||||
seq2  AGGCAAAAAGGTGGGACTGTGTGTATCTTTTTGCACCTGTGAGTGGTACA  850

seq1  GCACAGAT-CCTATAGACAGAAATGAGCAGCCCAGTGTAAGGACACCAGT  895
      |||||||| ||||||||||||||||||||||||||||||| |||| ||||
seq2  GCACAGATCCCTATAGACAGAAATGAGCAGCCCAGTGTAA-GACATCAGT  899

seq1  T-ATGAAACAACTCTGAGCAAGCAGGGTTACTCCCCTTCTTGACAAAGCC  944
      | ||||||| ||||||||||||||||| |||| |||||||||||| || |
seq2  TAATGAAAC-ACTCTGAGCAAGCAGGG-TACT-CCCTTCTTGACATAGTC  946

seq1  CTTGGAGAGAAATTGAGCTGTTTGGGCTATAGATCT  980
      | ||||||| |||||| |||| ||||||||||||||
seq2  CCTGGAGAG-AATTGA-CTGTCTGGGCTATAGATCT  980