BAC Information

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BAC

Clone NameB6Ng01-074O20
Chromosome13 (Build37)
Map Location 64,660,420 - 64,661,264
singlet/doubletsinglet
Overlap genenone
Upstream genePtch1, C030010C08Rik, 0610007P08Rik, 9330134C04Rik, EG665575, Hsd17b3, Slc35d2, Zfp367, Habp4, Cdc14b, 1110018J18Rik, Ctsl, Ccrk, LOC665612, 1190003K10Rik, LOC218298
Downstream genePpia-ps13_866.1, LOC238678, LOC631470, Cntnap3, EG432767, 4930458L03Rik, LOC218301, LOC628515, 4932441B19Rik, Gm274, Hiatl1, LOC100042311, Olfr465-ps1, Olfr466, Nlrp4f, ENSMUSG00000074847, Zfp369, LOC100042347, LOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777, EG628648
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074O20.bB6Ng01-074O20.g
ACCDH891640DH891641
length1,152851
definitionDH891640|Mus musculus domesticus DNA, BAC clone: B6Ng01-074O20, 5' end.DH891641|Mus musculus domesticus DNA, BAC clone: B6Ng01-074O20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggaaggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattatccccaaacc
taggattcccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaactcccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacattagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgcccgggcctagcaaac
acagaagtggatgctcacagtcagctaatggtggatcacaggctcccatg
agagctagagaagaccaagagctaaagggatctgcacctataggtggaac
acatatgaactacagtacccagagctctgactctactgcatatgtatcaa
aggatggctagtcgcatcactgaaagaaaggcccatgaacgcaacttata
tggtcagatacaggtatggcatgtccaaaagggaatgggtgtgtggttag
ca
gaattcacatttcagaatcaaagtatttctctggcaatgttatttgtatt
ttgaggagggcacctccttctttttccagccccactgcttttcagtgcat
cccacgaacggggtttttatagtgacctctgtttcttcaagcctgaaaca
ttattctttgatttggtattggagttaactgaaaataaggctcaaaataa
ttgttgtgcttttatagatctttttgtcaactctttttttgccctgagga
ttttctttgtgacattaatagcattaattttttgtgggggcatattttgt
ctatttctgttgtgtatgttctgttgtttctgtctttcagaaaatccaag
gttgttggctttaattctattacataacataaatggaagtgttgtgttta
cagaaattctgctcccccctctttttctctttatgtttgtgatgcatgtg
atatgtggtttgtgtttggtttgtatatgtgtgctgtatatgtgaatgag
aacctacgtgtgccacaactaacatgtggaagtcggaggataatcttgga
tgtcagtgtttgacttgacttgtttaaggcagggtctcttgctcttggct
gtttatttccaggataactggctcctgagctgctgaaggtttctctttgt
ttccacctcctctctcaccatagaactgggggttatatgtgtagcccagg
ctggcctcgaactcgtgatcctcctgcctctgcctccttcagcaaatcct
accagcgtggccctagttggccatcagtggaaagagaggcccattgttct
tgcaaacttttattatgcctcagtacaggggaacgccatggccaagaagt
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_64660420_64661264
seq2: B6Ng01-074O20.g_71_921

seq1  GAATTCACATTTCAGAATCAAAGTATTTCTCTGGCAATGTTATTTGTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATTTCAGAATCAAAGTATTTCTCTGGCAATGTTATTTGTATT  50

seq1  TTGAGGAGGGCACCTCCTTCTTTTTCCAGCCCCACTGCTTTTCAGTGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGAGGGCACCTCCTTCTTTTTCCAGCCCCACTGCTTTTCAGTGCAT  100

seq1  CCCACGAACGGGGTTTTTATAGTGACCTCTGTTTCTTCAAGCCTGAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACGAACGGGGTTTTTATAGTGACCTCTGTTTCTTCAAGCCTGAAACA  150

seq1  TTATTCTTTGATTTGGTATTGGAGTTAACTGAAAATAAGGCTCAAAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTTTGATTTGGTATTGGAGTTAACTGAAAATAAGGCTCAAAATAA  200

seq1  TTGTTGTGCTTTTATAGATCTTTTTGTCAACTCTTTTTTTGCCCTGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTGCTTTTATAGATCTTTTTGTCAACTCTTTTTTTGCCCTGAGGA  250

seq1  TTTTCTTTGTGACATTAATAGCATTAATTTTTTGTGGGGGCATATTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTGTGACATTAATAGCATTAATTTTTTGTGGGGGCATATTTTGT  300

seq1  CTATTTCTGTTGTGTATGTTCTGTTGTTTCTGTCTTTCAGAAAATCCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCTGTTGTGTATGTTCTGTTGTTTCTGTCTTTCAGAAAATCCAAG  350

seq1  GTTGTTGGCTTTAATTCTATTACATAACATAAATGGAAGTGTTGTGTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGGCTTTAATTCTATTACATAACATAAATGGAAGTGTTGTGTTTA  400

seq1  CAGAAATTCTGCTCCCCCCTCTTTTTCTCTTTATGTTTGTGATGCATGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATTCTGCTCCCCCCTCTTTTTCTCTTTATGTTTGTGATGCATGTG  450

seq1  ATATGTGGTTTGTGTTTGGTTTGTATATGTGTGCTGTATATGTGAATGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGGTTTGTGTTTGGTTTGTATATGTGTGCTGTATATGTGAATGAG  500

seq1  AACCTACGTGTGCCACAACTAACATGTGGAAGTCGGAGGATAATCTTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTACGTGTGCCACAACTAACATGTGGAAGTCGGAGGATAATCTTGGA  550

seq1  TGTCAGTGTTTGACTTGACTTGTTTAAGGCAGGGTCTCTTGCTCTTGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGTGTTTGACTTGACTTGTTTAAGGCAGGGTCTCTTGCTCTTGGCT  600

seq1  GTTTA-TTCCAGGATAACTGGCTCCTGAGCTGCTGAAGG-TTCTC-TTGT  647
      ||||| ||||||||||||||||||||||||||||||||| ||||| ||||
seq2  GTTTATTTCCAGGATAACTGGCTCCTGAGCTGCTGAAGGTTTCTCTTTGT  650

seq1  TTCCACCTCCTCTCTCACCATAGAACT-GGGGTTATATGTGTAGCCCAGG  696
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTCCACCTCCTCTCTCACCATAGAACTGGGGGTTATATGTGTAGCCCAGG  700

seq1  CTGGCCTCGAACTCGTGATCCTCCTGCCTCTGCCTCCTTCAGCAAATCCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTCGAACTCGTGATCCTCCTGCCTCTGCCTCCTTCAGCAAATCCT  750

seq1  ACCAGCGTGGCCCTAGTTGGCCATCAGTGGAAAGAGAGGCCCATTGGTCT  796
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ACCAGCGTGGCCCTAGTTGGCCATCAGTGGAAAGAGAGGCCCATTGTTCT  800

seq1  TGCAAACTTT--ATATGCCTCAGTACAGGGGAACGCCAGGGCCAAGAAGT  844
      ||||||||||   ||||||||||||||||||||||||| |||||||||||
seq2  TGCAAACTTTTATTATGCCTCAGTACAGGGGAACGCCATGGCCAAGAAGT  850

seq1  G  845
      |
seq2  G  851