BAC Information

Click to search

BAC

Clone NameB6Ng01-075G06
Chromosome13 (Build37)17 (Build37)
Map Location 118,144,269 - 118,144,85118,130,235 - 18,130,299
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG668276, Gm280, LOC100041169, Parp8, LOC668288, LOC623312, Emb
Downstream geneEG623365, LOC382807, Hcn1, LOC100041695, LOC674926
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075G06.bB6Ng01-075G06.g
ACCDH891965DH891966
length578642
definitionDH891965|Mus musculus domesticus DNA, BAC clone: B6Ng01-075G06, 5' end.DH891966|Mus musculus domesticus DNA, BAC clone: B6Ng01-075G06, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(118,144,269 - 118,144,851)(18,130,235 - 18,130,299)
sequence
atttcagataagtttgattttccagggactattataatagtggtgttaat
ttctggagaagacttattgttttaattattcttgttgtctgtatttttgg
aatgggatctaggtatcttgagtaagatattggtggtatttcttgataga
atatctatctggtcttgtctctgttgagtgggtgtttgaacctttctttg
acatttcagattttgcatatgttgagtgacactttgttctcatatctatg
gccaacttggggctctcagtcaaattcttggagcagagaatttgggaagc
tgatagtcacatgggtgtggggactcattctggcactttttacctggtat
tctggtgtgtattccatgagatagaaggatcaagcaatgtacagggttgt
tgactggcaggtgggcaaggcaacaggggcctggctgagttggacttcac
atagttctgaacctgagaaggggatggggtggtttgtaggtgaatggata
tgaaggctggctctggggtgttcttactgtgccttctaactttgatctct
acatctttttgggggggggggtaaggtc
gaattcaaatggatttatacaactttgtatatttacactcttcacaaaac
aactccaaatggatcaaagtcctctaccagatacactgaacatgacagaa
aaagaaaaagtaggacataatcttgagctcactagaattggaaaagcctt
tctgaaaaaaaataccattagcatagacactaagatcaacaattaataaa
ttaatcttgagaaactggaaaggttctgcaatgtaaataatgctgccatt
gagggggaaagtggcagccaacagagtaagatgagatttttaccaattat
acatacaatagagcactgatataaaaaatatataaagaactcaagaaatt
agataccacagaaacaaaacctaaatagagtgtcccttttttttttttga
aagattttccaatttttggaatattggttattttattggatattttattt
atttacatttcaaatgttcccctttcctggtttcccctttgcaaattccc
tatcactctccctcacacacttaacctgcttctatgagggttctttccaa
ctcacctacccacccctacttccccatcctggcattcctctacactgggg
cattgagccttcacaggaccaagggcctctcctcccattgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_118144269_118144851
seq2: B6Ng01-075G06.b_46_629

seq1  GAATTCATTTCAGATAAGTTTGATTTTCCAGGGACTATTATAATAGTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCAGATAAGTTTGATTTTCCAGGGACTATTATAATAGTGGT  50

seq1  GTTAATTTCTGGAGAAGACTTATTGTTTTAATTATTCTTGTTGTCTGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTTCTGGAGAAGACTTATTGTTTTAATTATTCTTGTTGTCTGTAT  100

seq1  TTTTGGAATGGGATCTAGGTATCTTGAGTAAGATATTGGTGGTATTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGAATGGGATCTAGGTATCTTGAGTAAGATATTGGTGGTATTTCTT  150

seq1  GATAGAATATCTATCTGGTCTTGTCTCTGTTGAGTGGGTGTTTGAACCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAATATCTATCTGGTCTTGTCTCTGTTGAGTGGGTGTTTGAACCTT  200

seq1  TCTTTGACATTTCAGATTTTGCATATGTTGAGTGACACTTTGTTCTCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGACATTTCAGATTTTGCATATGTTGAGTGACACTTTGTTCTCATA  250

seq1  TCTATGGCCAACTTGGGGCTCTCAGTCAAATTCTTGGAGCAGAGAATTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGGCCAACTTGGGGCTCTCAGTCAAATTCTTGGAGCAGAGAATTTG  300

seq1  GGAAGCTGATAGTCACATGGGTGTGGGGACTCATTCTGGCACTTTTTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCTGATAGTCACATGGGTGTGGGGACTCATTCTGGCACTTTTTACC  350

seq1  TGGTATTCTGGTGTGTATTCCATGAGATAGAAGGATCAAGCAATGTACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTCTGGTGTGTATTCCATGAGATAGAAGGATCAAGCAATGTACAG  400

seq1  GGTTGTTGACTGGCAGGTGGGCAAGGCAACAGGGGCCTGGCTGAGTTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTTGACTGGCAGGTGGGCAAGGCAACAGGGGCCTGGCTGAGTTGGA  450

seq1  CTTCACATAGTTCTGAACCTGAGAAGGGGATGGGGTGGTTTGTAGGTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACATAGTTCTGAACCTGAGAAGGGGATGGGGTGGTTTGTAGGTGAA  500

seq1  TGGATATGAAGGCTGGCTCTGGGGTGTTCTTACTGTGCCTTCTAACTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATGAAGGCTGGCTCTGGGGTGTTCTTACTGTGCCTTCTAACTTTG  550

seq1  ATCTCTACATCTTTTT-GGGGGGGGGGTAAGGTC  583
      |||||||||||||||| |||||||||||||||||
seq2  ATCTCTACATCTTTTTGGGGGGGGGGGTAAGGTC  584

seq1: chr17_18130235_18130299
seq2: B6Ng01-075G06.g_644_708

seq1  CCTGGCCTTCCCCTACACTGGGGCATAGAGCTTTTACAGAACCAAGGGCC  50
      |||||| |||| |||||||||||||| |||| || |||| ||||||||||
seq2  CCTGGCATTCCTCTACACTGGGGCATTGAGCCTTCACAGGACCAAGGGCC  50

seq1  TCTCCTCCCATTGAT  65
      |||||||||||||||
seq2  TCTCCTCCCATTGAT  65