BAC Information

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BAC

Clone NameB6Ng01-077B14
Chromosome13 (Build37)
Map Location 81,080,387 - 81,081,507
singlet/doubletsinglet
Overlap geneLOC666964
Upstream geneLOC382780, EG666933, Arrdc3
Downstream geneLOC100043074, LOC218368, LOC666979, EG666984, Gpr98, Lysmd3, Polr3g, 2900024O10Rik, Cetn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077B14.bB6Ng01-077B14.g
ACCDH893163DH893164
length9561,102
definitionDH893163|Mus musculus domesticus DNA, BAC clone: B6Ng01-077B14, 5' end.DH893164|Mus musculus domesticus DNA, BAC clone: B6Ng01-077B14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccatttttaatagggttatttatttt
ctggagtccatcttctcgagttatatatatatatatatatatttatatat
atatatatatatataaatatatatatatatattggatattagtcccctct
ctgatttaggattgataaagatcctttctgaatctgttggtggctatttt
tttttcttattgacagtgtcctttgccttacagaagctttgcaattttat
gaggtcccatttgttaattcttgatcttacagccccagccattgctgttc
tgttcaggaatttttcccccgtgcccatatctttgaagcttttccccact
ttctcatctataagttaagtcagacatggtgattccaccagaggttctct
ggttttatgtggagttccttgatccacttagacttgagctttgtacaagg
agataagaatggatcaatttgctttcttctacatgctaaccaccaattga
accagcaccatttgttgaagatgctgccttctttccactggatggtttta
gatcctttgtcgaagtttaagtgaccagaggtgtgtgggttcatttctgg
gtcttcagttctattccattgatctgtcactgtaccagtaccatgcagtt
tttatcacaattgctctgtagtacagcttgaggtcaggcatggtgattcc
accagaagttcttgtattgttgagaatagtttttgctatcctaggttttt
tttgttattccacatgaatttgcaaattgccctttctaactcagtgaaga
attgagttggaattttgatggggatgcattgaatctgtagattgcttttg
ggaagatagccattttgactatgtaatcctgccaatccatgagcaaatat
atctttcatcttctagatctccttccatttctttcttcgagacttgaagt
ctttct

gaattccatcgttaaccataggttaccgatcatacgctgaggaactgtct
ggccttatcaggtagaactgaaatcatgggagaagacatggtaatgacac
taaaagggggcacaaggaaagctcccccttccaggacaggtgcgagcacc
actctggccgctgtgtagctcaggactcctcaggacagctggctgacacg
gacagattgttcgctgcccactccaggggtttgcaggcgttctttcacac
atcagcggagcaggggaggcactatctgttctctgccattagggattcct
atgcaatctgaggaaagaagcctttttaaccctcagaagtgatccttgag
atctctagtattgatctacatgcagaaccacttctggaacttgaatcatt
gagagagcatatgtatgctggcactgtggaatcttaaaccacctaggatt
aaaaacaatcaaaaacctttagtctgtttgaagatgacattatggaacca
aaccacttactactcctcttttcacctgccaatacagcaaaaagtaatgt
tgaggctacctccatcgcccccccccccacccgctttccttcttctatat
gtccctacattaaagaaggtacttgggggctccttcaagaaaagttgact
ccaaagtgagctccagtggtcagccagggccccatttctagagggcagag
tacagttctggtatgagggcaacactgtgtggctgccacacaccacttcc
cccaacccatctgcatacataggctgagcacttgctcagacacagggacc
catgagaacaagtccagtgttgcttcaccgattaaagggctcccatgaag
actcatgcagctagtgccaccctacagactgcccgagctgcccacaggaa
aactaattacattcagatcgctggagagcggtcatccagatacatacctt
gcaaaacttaaggaacattcaggttgagtatggttcagatggtttgcaat
acccatgctcgtttttatgttgctaagactcttgctaggaacgaacactg
gaaatatcggaatgtctcaagagtttaggccactactcagctgtgaacgc
ct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_81080387_81081507
seq2: B6Ng01-077B14.g_68_1169 (reverse)

seq1  AGGCGTTCACAGCTTGAGTTGGTTTGGCCTAAGACTCTTGAGAACATTAC  50
      ||||||||||||| ||||| |   |||||||| ||||||||| ||||| |
seq2  AGGCGTTCACAGC-TGAGTAG---TGGCCTAA-ACTCTTGAG-ACATT-C  43

seq1  AGATTAAATTTCAAGTGTTTCGTTTCCTAGCAAAGAGTCTTTAGCAACAT  100
       |||   ||||| |||| |||| |||||||| ||||||| ||||||||||
seq2  CGAT---ATTTCCAGTG-TTCG-TTCCTAGC-AAGAGTC-TTAGCAACAT  86

seq1  AAAAACGAGCATGTGTTATTTGCAAACCATCTGAACCATTACTCAACCTG  150
      ||||||||||||| ||   ||||||||||||||||||| |||||||||||
seq2  AAAAACGAGCATGGGT--ATTGCAAACCATCTGAACCA-TACTCAACCTG  133

seq1  AATGTTCCTAAGTTTTTGCAAGGTATGTATTCTGGATGACCGCTCTCCAG  200
      ||||||||| |  |||||||||||||||| ||||||||||||||||||||
seq2  AATGTTCCTTAAGTTTTGCAAGGTATGTA-TCTGGATGACCGCTCTCCAG  182

seq1  CGATCTGAATGTAATTAGTTTTTCCTGTGGGCAGCTCGGGCAGTCTGTAG  250
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CGATCTGAATGTAATTAG-TTTTCCTGTGGGCAGCTCGGGCAGTCTGTAG  231

seq1  GGTGGCACTAGCTGCATGAGTCTTCATGGGAGCCCTTTAATCGGTGAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCACTAGCTGCATGAGTCTTCATGGGAGCCCTTTAATCGGTGAAGC  281

seq1  AACACTGGACTTGTTCTCATGGGTCCCTGTGTCTGAGCAAGTGCTCAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGGACTTGTTCTCATGGGTCCCTGTGTCTGAGCAAGTGCTCAGCC  331

seq1  TATGTATGCAGATGGGTTGGGGGAAGTGGTGTGTGGCAGCCACACAGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATGCAGATGGGTTGGGGGAAGTGGTGTGTGGCAGCCACACAGTGT  381

seq1  TGCCCTCATACCAGAACTGTACTCTGCCCTCTAGAAATGGGGCCCTGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCATACCAGAACTGTACTCTGCCCTCTAGAAATGGGGCCCTGGCT  431

seq1  GACCACTGGAGCTCACTTTGGAGTCAACTTTTCTTGAAGGAGCCCCCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACTGGAGCTCACTTTGGAGTCAACTTTTCTTGAAGGAGCCCCCAAG  481

seq1  TACCTTCTTTAATGTAGGGACATATAGAAGAAGGAAAGCGGGTGGGGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTCTTTAATGTAGGGACATATAGAAGAAGGAAAGCGGGTGGGGGGG  531

seq1  GGGGCGATGGAGGTAGCCTCAACATTACTTTTTGCTGTATTGGCAGGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCGATGGAGGTAGCCTCAACATTACTTTTTGCTGTATTGGCAGGTGA  581

seq1  AAAGAGGAGTAGTAAGTGGTTTGGTTCCATAATGTCATCTTCAAACAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGAGTAGTAAGTGGTTTGGTTCCATAATGTCATCTTCAAACAGAC  631

seq1  TAAAGGTTTTTGATTGTTTTTAATCCTAGGTGGTTTAAGATTCCACAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTTTTTGATTGTTTTTAATCCTAGGTGGTTTAAGATTCCACAGTG  681

seq1  CCAGCATACATATGCTCTCTCAATGATTCAAGTTCCAGAAGTGGTTCTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCATACATATGCTCTCTCAATGATTCAAGTTCCAGAAGTGGTTCTGC  731

seq1  ATGTAGATCAATACTAGAGATCTCAAGGATCACTTCTGAGGGTTAAAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGATCAATACTAGAGATCTCAAGGATCACTTCTGAGGGTTAAAAAG  781

seq1  GCTTCTTTCCTCAGATTGCATAGGAATCCCTAATGGCAGAGAACAGATAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTTCCTCAGATTGCATAGGAATCCCTAATGGCAGAGAACAGATAG  831

seq1  TGCCTCCCCTGCTCCGCTGATGTGTGAAAGAACGCCTGCAAACCCCTGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCCCTGCTCCGCTGATGTGTGAAAGAACGCCTGCAAACCCCTGGA  881

seq1  GTGGGCAGCGAACAATCTGTCCGTGTCAGCCAGCTGTCCTGAGGAGTCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCAGCGAACAATCTGTCCGTGTCAGCCAGCTGTCCTGAGGAGTCCT  931

seq1  GAGCTACACAGCGGCCAGAGTGGTGCTCGCACCTGTCCTGGAAGGGGGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTACACAGCGGCCAGAGTGGTGCTCGCACCTGTCCTGGAAGGGGGAG  981

seq1  CTTTCCTTGTGCCCCCTTTTAGTGTCATTACCATGTCTTCTCCCATGATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTGTGCCCCCTTTTAGTGTCATTACCATGTCTTCTCCCATGATT  1031

seq1  TCAGTTCTACCTGATAAGGCCAGACAGTTCCTCAGCGTATGATCGGTAAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCTACCTGATAAGGCCAGACAGTTCCTCAGCGTATGATCGGTAAC  1081

seq1  CTATGGTTAACGATGGAATTC  1121
      |||||||||||||||||||||
seq2  CTATGGTTAACGATGGAATTC  1102


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