BAC Information

Click to search

BAC

Clone NameB6Ng01-077D10
Chromosome13 (Build37)
Map Location 7,717,700 - 7,718,902
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667611, EG623516
Downstream geneLOC791083, LOC382722, Adarb2, EG666941
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077D10.bB6Ng01-077D10.g
ACCDH893249DH893250
length1,2141,181
definitionDH893249|Mus musculus domesticus DNA, BAC clone: B6Ng01-077D10, 5' end.DH893250|Mus musculus domesticus DNA, BAC clone: B6Ng01-077D10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccacattttatgggggttatttgatt
tttctggagtccatcctcttgagttctttatatatattggatattagtcc
cctatctgatttaagataggtaaagatcctttcccaatctgttggtggac
tttttgtcttattgacggtgtctttttccttgcagaagctttgcagtttc
atgaggtcccatttgtcaatcctcgatcttacagcacaagccattgctct
tctattcaggaattttttccctgtgcccatatcttcgagacatttcccca
ctttctcctctataagtttcagtgtctctggttttatgtgaagttccttg
atccacttagatttgaccttagtacaaggagagaggaatgggtcgattcg
cattcttctacatgataacaaccagttgtgccagcaccatttgttgaaaa
tgctgtctttcttccactggatggttttagctcccttgtcgaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattttattccattg
gtctacttgtctgtcactataccagtaccatgcagttttttaacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggtacttt
tatccttgagaagagcttttgctatcctaggttttttgttattccagatg
aatttgcagattgctctttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatcttccatattc
tgagatcttctttaatttttttcttcagagacttgaagttttatcataca
gatctttcacttccttagttagagtcacaccagatattttatatatttgt
gactattgagaggtgtgtttccctaatttctttctcagctgttattcttt
gtgtagagaaggcatgactgtttgagtatttatcagctactcactgaagc
tgtttatcagtttaggagtctctggtgatttaggtcacttataatataaa
ttcaattcatctgcaagggatatttggactccactttcaatggatcctga
ttcttgtcaatgctgctagactcaatcatgtgaacgatggtgagtaatgt
ggcgtccctgtgct
gaattcacattgaacactcatgtaacacttacggtggatgtgcaatcttg
tgcttgtagccctagagatgtatgagaagacatagccagcttactcagga
caatgagctccaaattctgtgaaagacacagtcttaaaattatcaggagc
agtgtcataatggaatacactcagttttaaaccctggcctctgcaaatac
acagttgagaatgttcaccactgcacacattcacacagatgtatactcca
cacacagtatatggatggatagataaataaatagatagatagatatacat
aaacattaatttattaaaaatgtaaccatctaggttgtatttaatcaaga
atttatgctgtgctgaagtttttcttatatttaatggaaattaacagtaa
atatattcaaacataccttaggtgctagggagatggttcactaatcaaag
cacatgttgtataagcataaaaacctgaatttgggttcctagcacctaca
taaatgtcaaacaggcatggaagactatgtgtaatcacaacactcaggag
gagggatctctgagacaagctggtagctagatgagccaaatctgtgatct
ctggattttaatggaaaccaccctctcaatacataaacatggagagtgaa
taatatgcttacatactcacatgcaaatcctcccaacacaaatatgtgtc
cttccatgcacatacaagaaaaactaaaacaaaataaatcatgctgtgta
aaattaccttcttagctgccttgagagctattagatggtcaaggactgca
tcaaatcctcttctttagaagtggtgctaatgcagatatctctagtacca
gggttagatggcattgctatttggtgtgatggataggctgtagaggaatc
actataggtcacaagcttcaaaaaataacttctttaggcaatctggagtt
ctaatgctctatgtatagaaagatcccaagtcttttctctcttttcacat
tgttttcaatgccttaaccgtgaataatcgctactgaatttgctagtatt
ttcttctctttgctgctattcgagataataaatatagagcccatttcaca
ttgagtgggagttatggatcatcacaaacacgatgaccatgaagattctt
acgtgtgttatttcataacttctttattttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_7717700_7718902
seq2: B6Ng01-077D10.g_66_1246 (reverse)

seq1  CAAAATAAAGGAAGTTTATGAAATAACACACGTTAGGAAATTCTTCATTG  50
      ||||||||| |||| |||||||||||||||||| ||   | ||||||| |
seq2  CAAAATAAA-GAAG-TTATGAAATAACACACGTAAG---AATCTTCATGG  45

seq1  TCATCTGTGTTTGTTGATGTATCATAACTCCCACTTCAATGTGAAAATGT  100
      ||||| ||||||| |||||   |||||||||||| |||||||| ||||| 
seq2  TCATC-GTGTTTG-TGATGATCCATAACTCCCAC-TCAATGTG-AAATGG  91

seq1  GCTTCTATA-TTATTATCTCTGAATAGCAGCAAAAGAAGAGAAAATACTA  149
      || |||||| |||||||||| |||||||||| |||||  |||||||||||
seq2  GC-TCTATATTTATTATCTC-GAATAGCAGC-AAAGAGAAGAAAATACTA  138

seq1  GCAAAATTCAGTAGCGGAATTATTCACGGTTAAGGCATTTGAAAAACAAT  199
      || |||||||||||||  |||||||||||||||||||||   ||||||| 
seq2  GC-AAATTCAGTAGCG--ATTATTCACGGTTAAGGCATT--GAAAACAA-  182

seq1  TGTGAAAAAGAAGAGAAAAGACTTGGGATCTTTCTATACATAAGAGCATT  249
      ||||||||   |||||||||||||||||||||||||||||| ||||||||
seq2  TGTGAAAA--GAGAGAAAAGACTTGGGATCTTTCTATACAT-AGAGCATT  229

seq1  AAGAACTCCAGATTGCCTAAAGAAGTTATTTTTTGAAGCTTGTTGACCTA  299
       ||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  -AGAACTCCAGATTGCCTAAAGAAGTTATTTTTTGAAGCTTG-TGACCTA  277

seq1  TAGTGATTCCTCTACAGCCTATCCATCACACCAAATAGCAATGCCATCTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGATTCCTCTACAGCCTATCCATCACACCAAATAGCAATGCCATCTA  327

seq1  ACCCTGGTACTAGAGATATCTGCATTAGCACCACTTCTAAAGAAGAGGAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGGTACTAGAGATATCTGCATTAGCACCACTTCTAAAGAAGAGGAT  377

seq1  TTGATGCAGTCCTTGACCATCTAATAGCTCTCAAGGCAGCTAAGAAGGTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGCAGTCCTTGACCATCTAATAGCTCTCAAGGCAGCTAAGAAGGTA  427

seq1  ATTTTACACAGCATGATTTATTTTGTTTTAGTTTTTCTTGTATGTGCATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACACAGCATGATTTATTTTGTTTTAGTTTTTCTTGTATGTGCATG  477

seq1  GAAGGACACATATTTGTGTTGGGAGGATTTGCATGTGAGTATGTAAGCAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACACATATTTGTGTTGGGAGGATTTGCATGTGAGTATGTAAGCAT  527

seq1  ATTATTCACTCTCCATGTTTATGTATTGAGAGGGTGGTTTCCATTAAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCACTCTCCATGTTTATGTATTGAGAGGGTGGTTTCCATTAAAAT  577

seq1  CCAGAGATCACAGATTTGGCTCATCTAGCTACCAGCTTGTCTCAGAGATC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGATCACAGATTTGGCTCATCTAGCTACCAGCTTGTCTCAGAGATC  627

seq1  CCTCCTCCTGAGTGTTGTGATTACACATAGTCTTCCATGCCTGTTTGACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCTGAGTGTTGTGATTACACATAGTCTTCCATGCCTGTTTGACA  677

seq1  TTTATGTAGGTGCTAGGAACCCAAATTCAGGTTTTTATGCTTATACAACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTAGGTGCTAGGAACCCAAATTCAGGTTTTTATGCTTATACAACA  727

seq1  TGTGCTTTGATTAGTGAACCATCTCCCTAGCACCTAAGGTATGTTTGAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTTGATTAGTGAACCATCTCCCTAGCACCTAAGGTATGTTTGAAT  777

seq1  ATATTTACTGTTAATTTCCATTAAATATAAGAAAAACTTCAGCACAGCAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTACTGTTAATTTCCATTAAATATAAGAAAAACTTCAGCACAGCAT  827

seq1  AAATTCTTGATTAAATACAACCTAGATGGTTACATTTTTAATAAATTAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTTGATTAAATACAACCTAGATGGTTACATTTTTAATAAATTAAT  877

seq1  GTTTATGTATATCTATCTATCTATTTATTTATCTATCCATCCATATACTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGTATATCTATCTATCTATTTATTTATCTATCCATCCATATACTG  927

seq1  TGTGTGGAGTATACATCTGTGTGAATGTGTGCAGTGGTGAACATTCTCAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGAGTATACATCTGTGTGAATGTGTGCAGTGGTGAACATTCTCAA  977

seq1  CTGTGTATTTGCAGAGGCCAGGGTTTAAAACTGAGTGTATTCCATTATGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTATTTGCAGAGGCCAGGGTTTAAAACTGAGTGTATTCCATTATGA  1027

seq1  CACTGCTCCTGATAATTTTAAGACTGTGTCTTTCACAGAATTTGGAGCTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTCCTGATAATTTTAAGACTGTGTCTTTCACAGAATTTGGAGCTC  1077

seq1  ATTGTCCTGAGTAAGCTGGCTATGTCTTCTCATACATCTCTAGGGCTACA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCCTGAGTAAGCTGGCTATGTCTTCTCATACATCTCTAGGGCTACA  1127

seq1  AGCACAAGATTGCACATCCACCGTAAGTGTTACATGAGTGTTCAATGTGA  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAAGATTGCACATCCACCGTAAGTGTTACATGAGTGTTCAATGTGA  1177

seq1  ATTC  1203
      ||||
seq2  ATTC  1181