BAC Information

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BAC

Clone NameB6Ng01-079H09
Chromosome13 (Build37)
Map Location 68,332,275 - 68,333,419
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992
Downstream geneLOC666238, EG666245, EG666272, LOC100042223, Mtrr, LOC100042233, Fastkd3, 1700001L19Rik, Adcy2, LOC666205
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079H09.bB6Ng01-079H09.g
ACCDH894864DH894865
length1,1341,182
definitionDH894864|Mus musculus domesticus DNA, BAC clone: B6Ng01-079H09, 5' end.DH894865|Mus musculus domesticus DNA, BAC clone: B6Ng01-079H09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccatgtgcatttcaagcctttcaaaaccagctcaggtaaggaac
gactcacgtttgaacaaacagagagacaaagaaagcacagtacacacgtg
attggacatttctctgcctcagaaataaaagaggcgccggaatttagaac
aacagacatgagggtggaatactttctctaagacaaatgatacagtcaca
gagtaaccaacgttaggccatgctttctcagtggaagaatgcagagttgt
aacccaatatgtttaaagcttcaattatgtcagataaataaattgtagaa
atctactgggaacatgataccgaccctaacaatttaatcctggacacatc
tgaatttgtaaaagagataggtcctatgctgtgctcttaatacaaaagta
aactaaggaaaacttttttaaaagacataaatatgggagatacttagata
gttaatacagtaactttgttgatatcacactaaattacacacaatgaaat
gtgcagttctttgtatatcagtcattcctcaaataaggtctatcacctgt
tatctatctgtctatctatctatctatctatctatctatctatctatcta
tctatctatctatccatgcatgtgtgcattagttagacatatgcacagat
tatttatcagtacaaacatcagtgtgtgctacttatatcttccattcctg
tttattaagttcagatatgaagtgacaaagatgcccttagggcctgagtg
ccaacaaccagctgagtctgaagttggaatcttctgctctattcacctaa
ccattctgctactgcacacttacctgagctacatttctgactggaaatgg
ccctttcatctccacctacctccccttctgtggttaccacacaggcaaac
agctgtcctggttcaaaaagtaccttcctttgcacaatcctcttaaactg
ctgagtctgtgtgagaaaacagattaagtgcagctcacattaaaagaatg
tgcagcacactgctatgctcacggagagatctacccacatatctgagtct
cgttagacatttgatgctgcttgtcttagagaaattactcactcactttc
attgagcattatgccactgtttttttcatgccaa
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcacctaacaagatgatcatgtggtttttgtcttt
gagtttgtttatataatggactacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttgatcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgagtaattttgc
atcgatatttataagagaaattggtctgaagttctctatctttgttggat
ctttctatggtttaggtatcagagtaattgtggcttcatagagtgagttg
gtagagtaccttctacttctattttgtgaaatagttcgtgcagaacagga
attagatcctctttgaaggtctgatagaactctgcactaaacccgtctgg
tcctgggctttatttggatgggagatgattaatgactacttctatatctt
taggggatatgtggctgtttagatccttaacttgatcctgatttaacttt
ggtacctggtatctgtctagaaatttgtccatttcatccaggttttccag
ttttgttgagtatagccttttgtagaaggatctgatggtgttttggattt
cttcaggatctgttgttatgtctcccttttcatttctgattttgttaatt
aggatattgtccctgtgctctctagtgagtctagctaagggtttatctat
cttgttgattttctcaaagaaccaactcctcatttggttaattctttgaa
tagttcttcttgtttccactttgttgatttcacccctgagtttgattatt
tcctgccatctattcctcttgggtgaattagcttcctttttttttctagg
agcttttagatgttgttgttaagctgctagtgtgtgctctctccagtctt
cttggaggaactcagactatgagttcctctttagaaatgcttcgtgtgtc
cataggtttgggtatgttggggcttcattttattaaactctagaaggctt
taatttctttctaatcttcctgacaagtacatgagaaagaggttggtcag
ttccagggagttgctttcattatatattgttatgagacagctaggcctgt
ggcgaggacgcatggcttttccaatttgttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_68332275_68333419
seq2: B6Ng01-079H09.b_46_1169 (reverse)

seq1  AAAAACAGTTGGCAATAAATGCTCAAATGAAGTGAGTGAGTTAATTTTTC  50
      |||||||| |||||   |||||||||   ||||||||||| ||||||   
seq2  AAAAACAG-TGGCA--TAATGCTCAATGAAAGTGAGTGAG-TAATTT---  43

seq1  TTCTAAGACAAGCCACCATTCATATGTCTAAACGGAGACTTCAGATATGT  100
       ||||||||||| || || ||| ||||||||   ||||| ||||||||||
seq2  CTCTAAGACAAG-CAGCA-TCAAATGTCTAA--CGAGAC-TCAGATATGT  88

seq1  GTGTAGATCTCTCCGTTGGAGGCCATAGGCCAGTGTGCTGCACATTCTTT  150
      | ||||||||||||||  |||  |||||  ||||||||||||||||||||
seq2  GGGTAGATCTCTCCGT--GAG--CATAG--CAGTGTGCTGCACATTCTTT  132

seq1  TTATGTGAGCTGCACTTAATCTGTTTTCTCCACACCAGACTCAGCAGTTT  200
      | ||||||||||||||||||||||||||| |||| |||||||||||||||
seq2  TAATGTGAGCTGCACTTAATCTGTTTTCT-CACA-CAGACTCAGCAGTTT  180

seq1  AAGGAGGATTGTGCAAAGGAAGGTACTTTTTGAACCAGGACAGCTGTTTG  250
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AA-GAGGATTGTGCAAAGGAAGGTACTTTTTGAACCAGGACAGCTGTTTG  229

seq1  CCTGTGTGGTAACCACAGAAGGGGAGGTAGGTGGAGATGAAAGGGCCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTGGTAACCACAGAAGGGGAGGTAGGTGGAGATGAAAGGGCCATT  279

seq1  TCCAGTCAGAAATGTAGCTCAGGTAAGTGTGCAGTAGCAGAATGGTTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTCAGAAATGTAGCTCAGGTAAGTGTGCAGTAGCAGAATGGTTAGG  329

seq1  TGAATAGAGCAGAAGATTCCAACTTCAGACTCAGCTGGTTGTTGGCACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGAGCAGAAGATTCCAACTTCAGACTCAGCTGGTTGTTGGCACTC  379

seq1  AGGCCCTAAGGGCATCTTTGTCACTTCATATCTGAACTTAATAAACAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCTAAGGGCATCTTTGTCACTTCATATCTGAACTTAATAAACAGGA  429

seq1  ATGGAAGATATAAGTAGCACACACTGATGTTTGTACTGATAAATAATCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGATATAAGTAGCACACACTGATGTTTGTACTGATAAATAATCTG  479

seq1  TGCATATGTCTAACTAATGCACACATGCATGGATAGATAGATAGATAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATGTCTAACTAATGCACACATGCATGGATAGATAGATAGATAGAT  529

seq1  AGATAGATAGATAGATAGATAGATAGATAGATAGACAGATAGATAACAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATAGATAGATAGATAGATAGATAGATAGACAGATAGATAACAGG  579

seq1  TGATAGACCTTATTTGAGGAATGACTGATATACAAAGAACTGCACATTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGACCTTATTTGAGGAATGACTGATATACAAAGAACTGCACATTTC  629

seq1  ATTGTGTGTAATTTAGTGTGATATCAACAAAGTTACTGTATTAACTATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTGTAATTTAGTGTGATATCAACAAAGTTACTGTATTAACTATCT  679

seq1  AAGTATCTCCCATATTTATGTCTTTTAAAAAAGTTTTCCTTAGTTTACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATCTCCCATATTTATGTCTTTTAAAAAAGTTTTCCTTAGTTTACTT  729

seq1  TTGTATTAAGAGCACAGCATAGGACCTATCTCTTTTACAAATTCAGATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTAAGAGCACAGCATAGGACCTATCTCTTTTACAAATTCAGATGT  779

seq1  GTCCAGGATTAAATTGTTAGGGTCGGTATCATGTTCCCAGTAGATTTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGGATTAAATTGTTAGGGTCGGTATCATGTTCCCAGTAGATTTCTA  829

seq1  CAATTTATTTATCTGACATAATTGAAGCTTTAAACATATTGGGTTACAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTATTTATCTGACATAATTGAAGCTTTAAACATATTGGGTTACAAC  879

seq1  TCTGCATTCTTCCACTGAGAAAGCATGGCCTAACGTTGGTTACTCTGTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATTCTTCCACTGAGAAAGCATGGCCTAACGTTGGTTACTCTGTGA  929

seq1  CTGTATCATTTGTCTTAGAGAAAGTATTCCACCCTCATGTCTGTTGTTCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATCATTTGTCTTAGAGAAAGTATTCCACCCTCATGTCTGTTGTTCT  979

seq1  AAATTCCGGCGCCTCTTTTATTTCTGAGGCAGAGAAATGTCCAATCACGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCGGCGCCTCTTTTATTTCTGAGGCAGAGAAATGTCCAATCACGT  1029

seq1  GTGTACTGTGCTTTCTTTGTCTCTCTGTTTGTTCAAACGTGAGTCGTTCC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACTGTGCTTTCTTTGTCTCTCTGTTTGTTCAAACGTGAGTCGTTCC  1079

seq1  TTACCTGAGCTGGTTTTGAAAGGCTTGAAATGCACATGGGAATTC  1145
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTGAGCTGGTTTTGAAAGGCTTGAAATGCACATGGGAATTC  1124