BAC Information

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BAC

Clone NameB6Ng01-079M21
Chromosome13 (Build37)
Map Location 118,019,902 - 118,021,038
singlet/doubletsinglet
Overlap geneEmb
Upstream geneIsl1, EG668276, Gm280, LOC100041169, Parp8, LOC668288, LOC623312
Downstream geneEG623365, LOC382807, Hcn1, LOC100041695, LOC674926
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079M21.bB6Ng01-079M21.g
ACCDH895109DH895110
length1,1661,133
definitionDH895109|Mus musculus domesticus DNA, BAC clone: B6Ng01-079M21, 5' end.DH895110|Mus musculus domesticus DNA, BAC clone: B6Ng01-079M21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcatctgtggaatactgaggggctgagaagaacctgaaaaaatg
ttcagcatttttttttcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacttcacaccagtcagaatggctaagctcaaaaattcaggtgacag
cagatgctgacgaggatgtggagaaagataaacactcctccattgctggt
gggattgcaggcttgtacaaccactctggaaataagtctggtggttcctc
agaaaattggacatagtactaccagaagatccagtaattcctctcctggg
catatacccagaagaagttccaaccggtaagaaggacacatgctccattg
tgttcgtagcagccttatttataatagccagaagctgggaagaacccaga
tgtccctcaacagaggaatggatacaaaaaaatgtggtaatttatacaat
ggagtactactcagctattaaaaacaatgaatttatgaaattcttacgca
aatggatgtatctggaggatatcatcctgagtgaggtaacccaatcacaa
aagaactcacttgatatgcactcattgataagtggatattagtccagaaa
cctagaatacccaagaaacaatttccaaaacacaagaaaaacaagaagga
aaacaaactcgtgaatacttcattcctctctcgaatagggaataacatac
ccatggaaggagttgcagagacaaagtttggagcaaagatgaaagaatgg
accatccagagactgccccacccaggggtccatcccataatgagccacta
aacctagacactattgcatatgccagcaagatcttgctgaaaggaccctg
atatagccgtctcctgtgagactatgccagtgcctggcaaatacagaagt
ggatgctcacagtcatctataggatggaatacagggccccagtggagagc
tagagaaagtacacacgagatgaggggtctgcaccctatagtgacagata
tgactaaccagtaccccagagctcgtgtctctagctgcatatgttagcag
aagatgcctacccagcatcatggaagagagacccttggtctagccacttt
aatggctcagtacaggacgcccagggccagatggattgggtggtaagtgt
aacagcggtggggggt
gaattcttttgcaagttcattggaaggagaatatccgataaagatcgatg
ctttagttgggcaaaggtggcacactcttttaagaccagcactcaggaga
tagatgaaggtctgagttcaaggccagcctggtctacagaaggagttcca
ggacagccaaggctacacagagaaaccctgtcttgaaaaaccaaaataag
atgataagataaaaaggttgatgtcggggctggagagatggctcagtggt
taagagcgctgactgctcttccagaggccctgagttcaattcccagcaac
cacatggtggctcatgaccatctgtaatgggatctaatgccctcttttgg
tgtgtctggaaacagctacaatataatatatgtgaatgaactggtagtta
gcaatggctggaacagctaggatgttctgggactctctaggatctcttgc
ttgcatcgggtggcctgattttccttttcttggtattctttcagcttctg
tgagctgaggtttttgtccagccccattgagccttagagccccctcctct
tcctctttctaatgtaggtcccagatcggttctttcagagtaggtccctg
gaggcgaaaaggaaaatcgcctggtctcctgattatgctctcattccctt
actagagtcggtttacactctgtagattccgtgctcacgtgtgaaggaca
taggctcgggacagttaatactagaaataagtgcctctctgaagttttaa
tgagtcttaaatcaattgtgatccaaacagctgctttcgcactcattagc
ttttagggattcgcttaccccatctcactccttgtcagcacacactgtat
accaggtgcttttatccttccttggttaagtggggtcagagggaaaatgt
cacaaagcgccctcccttatgttttctgttgttgtcactctcctgtgact
ggctgtgtgaatcagaataccgtcatcagactgagtgaggtttgcccctc
tgaaaagtctcccttcttgtttcagaaaataggcatgcgatgacatgcga
agacatccttagtgttcagccaggccaggaaagaaaacctcccaatggag
ggatagatgctgcacccttcaggtcaggtggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_118019902_118021038
seq2: B6Ng01-079M21.g_68_1200

seq1  GAATTCTTTTGCAAGTTCATTGGAAGGAGAATATCCGATAAAGATCGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGCAAGTTCATTGGAAGGAGAATATCCGATAAAGATCGATG  50

seq1  CTTTAGTTGGGCAAAGGTGGCACACTCTTTTAAGACCAGCACTCAGGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTTGGGCAAAGGTGGCACACTCTTTTAAGACCAGCACTCAGGAGA  100

seq1  TAGATGAAGGTCTGAGTTCAAGGCCAGCCTGGTCTACAGAAGGAGTTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGAAGGTCTGAGTTCAAGGCCAGCCTGGTCTACAGAAGGAGTTCCA  150

seq1  GGACAGCCAAGGCTACACAGAGAAACCCTGTCTTGAAAAACCAAAATAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCCAAGGCTACACAGAGAAACCCTGTCTTGAAAAACCAAAATAAG  200

seq1  ATGATAAGATAAAAAGGTTGATGTCGGGGCTGGAGAGATGGCTCAGTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAAGATAAAAAGGTTGATGTCGGGGCTGGAGAGATGGCTCAGTGGT  250

seq1  TAAGAGCGCTGACTGCTCTTCCAGAGGCCCTGAGTTCAATTCCCAGCAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGCGCTGACTGCTCTTCCAGAGGCCCTGAGTTCAATTCCCAGCAAC  300

seq1  CACATGGTGGCTCATGACCATCTGTAATGGGATCTAATGCCCTCTTTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGTGGCTCATGACCATCTGTAATGGGATCTAATGCCCTCTTTTGG  350

seq1  TGTGTCTGGAAACAGCTACAATATAATATATGTGAATGAACTGGTAGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTGGAAACAGCTACAATATAATATATGTGAATGAACTGGTAGTTA  400

seq1  GCAATGGCTGGAACAGCTAGGATGTTCTGGGACTCTCTAGGATCTCTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGGCTGGAACAGCTAGGATGTTCTGGGACTCTCTAGGATCTCTTGC  450

seq1  TTGCATCGGGTGGCCTGATTTTCCTTTTCTTGGTATTCTTTCAGCTTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATCGGGTGGCCTGATTTTCCTTTTCTTGGTATTCTTTCAGCTTCTG  500

seq1  TGAGCTGAGGTTTTTGTCCAGCCCCATTGAGCCTTAGAGCCCCCTCCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGAGGTTTTTGTCCAGCCCCATTGAGCCTTAGAGCCCCCTCCTCT  550

seq1  TCCTCTTTCTAATGTAGGTCCCAGATCGGTTCTTTCAGAGTAGGTCCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTTCTAATGTAGGTCCCAGATCGGTTCTTTCAGAGTAGGTCCCTG  600

seq1  GAGGCGAAAAGGAAAATCGCCTGGTCTCCTGATTATGCTCTCATTCCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCGAAAAGGAAAATCGCCTGGTCTCCTGATTATGCTCTCATTCCCTT  650

seq1  ACTAGAGTCGGTTTACACTCTGTAGATTCCGTGCTCACGTGTGAAGGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAGTCGGTTTACACTCTGTAGATTCCGTGCTCACGTGTGAAGGACA  700

seq1  TAGGCTCGGGACAGTTAATACTAGAAATAAGTGCCTCTCTGAAGTTTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTCGGGACAGTTAATACTAGAAATAAGTGCCTCTCTGAAGTTTTAA  750

seq1  TGAGTCTTAAATCAATTGTGATCCAAACAGCTGCTTTCGCACTCATTAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTTAAATCAATTGTGATCCAAACAGCTGCTTTCGCACTCATTAGC  800

seq1  TTTTAGGGATTCGCTTACCCCATCTCACTCCTTGTCAGCACACACTGTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGGATTCGCTTACCCCATCTCACTCCTTGTCAGCACACACTGTAT  850

seq1  ACCAGGTGCTTTTATCCTTCCTTGGTTAAGTGGGGTCAGAGGGAAAATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGTGCTTTTATCCTTCCTTGGTTAAGTGGGGTCAGAGGGAAAATGT  900

seq1  CACAAAGCGCCCTCCCTTATGTTTTCTGTTGTTGTCACTCTCCTGTGACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGCGCCCTCCCTTATGTTTTCTGTTGTTGTCACTCTCCTGTGACT  950

seq1  GGCTGTGTGAATCAGAATAACCGTCATCAGACTGAGTGAGGTTTGCCCCT  1000
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGCTGTGTGAATCAGAAT-ACCGTCATCAGACTGAGTGAGGTTTGCCCCT  999

seq1  CTGAAAAGGTCTCCCTTCTTGTTTCAGAGATAGGGCATGCGATGACATGC  1050
      ||||||| |||||||||||||||||||| |   |||||||||||||||||
seq2  CTGAAAA-GTCTCCCTTCTTGTTTCAGAAAATAGGCATGCGATGACATGC  1048

seq1  G-AGACAT-CTTAGTGTTCAGCCAGGCCAGGAAAAGAAAACTTTCAAATG  1098
      | |||||| |||||||||||||||||||||| ||||||||| | | ||||
seq2  GAAGACATCCTTAGTGTTCAGCCAGGCCAGG-AAAGAAAACCTCCCAATG  1097

seq1  AGGGGATAGATGCTTGGCAACCTTCAAGGTCAGGTGGCT  1137
        ||||||||||||  ||| ||||| |||||||||||||
seq2  GAGGGATAGATGCT--GCACCCTTC-AGGTCAGGTGGCT  1133