BAC Information

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BAC

Clone NameB6Ng01-080I02
Chromosome13 (Build37)
Map Location 88,047,323 - 88,048,194
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC675707
Downstream geneLOC667230, EG435375, Edil3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080I02.bB6Ng01-080I02.g
ACCDH895625DH895626
length1,203872
definitionDH895625|Mus musculus domesticus DNA, BAC clone: B6Ng01-080I02, 5' end.DH895626|Mus musculus domesticus DNA, BAC clone: B6Ng01-080I02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatccatggtgagaatcttttatatgatctgcctctagttgcccc
tgcactagtggagacacagcttctatttttcttttgataaatgccactga
gcaacccacactgaaatattattaagccattgaattttatgagcatggga
tgcaggcaagatagtggccattacagaaaatacccaagcctctagtgcta
gagtggggctcaggcctttcaaatatcttactgccttgtctttcctttcc
tagcccctgaccaggcaaaaaatcattctcctaacatctgtttagtcact
actccattaggattacatgttaaaagaccaatctgtgactagagatctct
tccccagaaggtaataggcaaatgtggcatgatatagggttgaatttgtc
ttggattgtccttctcatctttccaggttagaagtttagaactttatttt
gaattattggcataagcaagtcccttgaaagtgggtgagagtatcaaata
aaggccaagttgattgccaatcttgtcctgttatatcagtcccagtatct
attaatctttcaaaactttttccttcaattatcaatttaaggttaagttt
catacttgtaatagattgaacccagtacacatcagaggaaccaaaaccac
tctgtcctctctcactcttaacttctttgcaaggtagtggatgcaaggga
actaaagtaagttgagcacttcttttgtcagcaggtacagttataatgcc
atggggggaaatagccatgattttaatttgtctctcatgatcattatcta
taaataatggataaatctgcaatccttttataataatgctgcttcagcct
gtaagtaatctccaggtcacaggatgcacggatccaaaactcctgtaggc
agggtttgaactcccatttctagggtcaatactttgagtggttgaactga
gtccagtccagcacttcctgattttgctctgataacttcagaaatgattt
tccaggcttggtagcagctttccagccccataagctgctttcttgtggat
gtctggaggcccagctggccctctgctcattcctaagagacagcctgaat
ccggttttttctacatccctgccatgatacctctttcactgagacaatcc
tggcaatctgatatcacttgtgcccagactcctggacaaatcatattttt
aag
gaattcttttgttgcaccaagggctgtgtgcatgctctatcttgaaattt
cagttacatatattttctaatttgagaatcaagcaaaatatccaagataa
aaatcaaggaaagacataaaaaatattattgaataaagtaaatcctcttc
ctaaataaagtatctgatgctatgtatcaaagtctatagtttctatactt
tttgatgttcaattattttctcctcacaggatgtgctttttctacttaag
ggctttttcatgatgggattttttttcatcatcttgattataaaatctta
gttcaatttaaaaaaatttaaaaaaaattacttagatttaagaaaattat
aaatcatcttcatcaagtaattgcatttattagcattttctgaaatagta
gctataaggtatatgagaacacgatcatcacaacttctcttcatgggatg
aaaatttaaaatgtgggcattttaagaaaaaatataaatacatgtaataa
atttataaaaataaaagttttaaaaatttcacatttaacatatatccata
tatatatatatatgtgaatatatatgtttgtgtatatatataatatatag
gtatacacacacatatatatatatgtatatgcataatatgtatatatatg
tatatgtatacacacacatatatattcacatgcatatataaatatatata
cacacatatagatatatacatgtatatgtatgtatatatatatatacata
cacacatatatattcacatgcatatatacatgtatacacacacacacaca
cacacacacacacacatatatatatatatatatatatatatatatatata
tatatatatatatatatatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_88047323_88048194
seq2: B6Ng01-080I02.g_67_938

seq1  GAATTCTTTTGTTGCACCAAGGGCTGTGTGCATGCTCTATCTTGAAATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGTTGCACCAAGGGCTGTGTGCATGCTCTATCTTGAAATTT  50

seq1  CAGTTACATATATTTTCTAATTTGAGAATCAAGCAAAATATCCAAGATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACATATATTTTCTAATTTGAGAATCAAGCAAAATATCCAAGATAA  100

seq1  AAATCAAGGAAAGACATAAAAAATATTATTGAATAAAGTAAATCCTCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAGGAAAGACATAAAAAATATTATTGAATAAAGTAAATCCTCTTC  150

seq1  CTAAATAAAGTATCTGATGCTATGTATCAAAGTCTATAGTTTCTATACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATAAAGTATCTGATGCTATGTATCAAAGTCTATAGTTTCTATACTT  200

seq1  TTTGATGTTCAATTATTTTCTCCTCACAGGATGTGCTTTTTCTACTTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGTTCAATTATTTTCTCCTCACAGGATGTGCTTTTTCTACTTAAG  250

seq1  GGCTTTTTCATGATGGGATTTTTTTTCATCATCTTGATTATAAAATCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTTCATGATGGGATTTTTTTTCATCATCTTGATTATAAAATCTTA  300

seq1  GTTCAATTTAAAAAAATTTAAAAAAAATTACTTAGATTTAAGAAAATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAATTTAAAAAAATTTAAAAAAAATTACTTAGATTTAAGAAAATTAT  350

seq1  AAATCATCTTCATCAAGTAATTGCATTTATTAGCATTTTCTGAAATAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATCTTCATCAAGTAATTGCATTTATTAGCATTTTCTGAAATAGTA  400

seq1  GCTATAAGGTATATGAGAACACGATCATCACAACTTCTCTTCATGGGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATAAGGTATATGAGAACACGATCATCACAACTTCTCTTCATGGGATG  450

seq1  AAAATTTAAAATGTGGGCATTTTAAGAAAAAATATAAATACATGTAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTAAAATGTGGGCATTTTAAGAAAAAATATAAATACATGTAATAA  500

seq1  ATTTATAAAAATAAAAGTTTTAAAAATTTCACATTTAACATATATCCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAAAAATAAAAGTTTTAAAAATTTCACATTTAACATATATCCATA  550

seq1  TATATATATATATGTGAATATATATGTTTGTGTATATATATAATATATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATGTGAATATATATGTTTGTGTATATATATAATATATAG  600

seq1  GTATACACACACATATATATATATGTATATGCATAATATGTATATATATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACACACACATATATATATATGTATATGCATAATATGTATATATATG  650

seq1  TATATGTATACACACACATATATATTCACATGCATATATAAATATATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTATACACACACATATATATTCACATGCATATATAAATATATATA  700

seq1  CACACATATAGATATATACATGTATATGTATGTATATATATATATACATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATATAGATATATACATGTATATGTATGTATATATATATATACATA  750

seq1  CACACATATATATTCACATGCATATATACATGTATACACACACACACACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATATATATTCACATGCATATATACATGTATACACACACACACACA  800

seq1  CACACACACACACACATATATATATATATATATATATATATATATATATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACATATATATATATATATATATATATATATATATATA  850

seq1  TATATATATATATATATATATA  872
      ||||||||||||||||||||||
seq2  TATATATATATATATATATATA  872