BAC Information

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BAC

Clone NameB6Ng01-082G19
Chromosome13 (Build37)
Map Location 107,829,777 - 107,989,858
singlet/doubletdoublet
Overlap geneLOC100040322
Upstream geneOlfr717-ps1, LOC631097, EG620949, Ipo11, Dimt1, Kif2a
Downstream geneLOC100040350, LOC100040366, Apoo, AI197445, LOC100040820, Zswim6, 3021401N23Rik, 2810008M24Rik, Ndufa12l, Ercc8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082G19.bB6Ng01-082G19.g
ACCDH896981DH896982
length659545
definitionDH896981|Mus musculus domesticus DNA, BAC clone: B6Ng01-082G19, 5' end.DH896982|Mus musculus domesticus DNA, BAC clone: B6Ng01-082G19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,989,200 - 107,989,858)(107,829,777 - 107,830,327)
sequence
gaattctctgactcattttaagaaaacttttgtaacacttcttactgtgt
aagagtaaaacataagcctgagaatttgattaaaaagtaaatacttctcc
cagaaaaataagacagtttatatacaaatccagaagacattaaacccaat
gaatactttcagtataaaagaatgtttgttctgctcccaaccaccatggc
attatgagaaaaatgccgctcattgttctagacaaaacagacagacagac
agtagtcagacagacagacagacagaccagacagacaccttccccttcac
ggataggtgactgagaaataacacccgatagctgagagttccttcattct
aaagaaagagaaagctgctttaagtttctaattatttgggcttaagtttt
agagaccattcaagtgatcatggatgagttactctttcatccaacaaaac
ctgtgaacagcccccacatcatcagtagtgcactgggctcagaggacacg
ggtgtgattcttgccttcatgggcttcacagaccataagaaagcacacat
gggtgattgcatccagagtcttgtggattcagcctttttgctttcagtgc
agggtgtgtgagtgagcaagcatcatttatccagtggaagaggaggagga
ggagggtgg
cacctagccaagatccattgcacaattatcggacactaaatgctttgtgt
tagggagggagagcaatctcactggtgagatgaactttgcacagcaaccg
aggtaagagattgagccatgatagtaaatgagagatgtccagtatataca
taagccttgaggcaacagtcttaggatggaggtctccagaaaaggctctt
aagaaaagggcaagattgagctgagttttgggggatgttagaattgagaa
ccctggcatggtgaccgtgccttcttctgcctttctgtttctttctgtat
taacttcttcttttgcttccaaatggctttcttcattcagtagacacatg
ctcactgtgggatttaaattctatatatttatagcctttccatagaaaca
ataattatgttctatgcaacagttcatcaaaaacaaaacaaagcaaatgt
cactgtcaatcttcagctactgagcatgtttgaagccagcctaaggctgc
atgaggattgctttccgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_107989200_107989858
seq2: B6Ng01-082G19.b_46_704 (reverse)

seq1  CCACCCTCCTCCTCCTCCTCTTCCACTGGATAAATGATGCTTGCTCACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTCCTCCTCCTCCTCTTCCACTGGATAAATGATGCTTGCTCACTC  50

seq1  ACACACCCTGCACTGAAAGCAAAAAGGCTGAATCCACAAGACTCTGGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCCTGCACTGAAAGCAAAAAGGCTGAATCCACAAGACTCTGGATG  100

seq1  CAATCACCCATGTGTGCTTTCTTATGGTCTGTGAAGCCCATGAAGGCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCACCCATGTGTGCTTTCTTATGGTCTGTGAAGCCCATGAAGGCAAG  150

seq1  AATCACACCCGTGTCCTCTGAGCCCAGTGCACTACTGATGATGTGGGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACACCCGTGTCCTCTGAGCCCAGTGCACTACTGATGATGTGGGGGC  200

seq1  TGTTCACAGGTTTTGTTGGATGAAAGAGTAACTCATCCATGATCACTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCACAGGTTTTGTTGGATGAAAGAGTAACTCATCCATGATCACTTGA  250

seq1  ATGGTCTCTAAAACTTAAGCCCAAATAATTAGAAACTTAAAGCAGCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCTCTAAAACTTAAGCCCAAATAATTAGAAACTTAAAGCAGCTTTC  300

seq1  TCTTTCTTTAGAATGAAGGAACTCTCAGCTATCGGGTGTTATTTCTCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTAGAATGAAGGAACTCTCAGCTATCGGGTGTTATTTCTCAGT  350

seq1  CACCTATCCGTGAAGGGGAAGGTGTCTGTCTGGTCTGTCTGTCTGTCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTATCCGTGAAGGGGAAGGTGTCTGTCTGGTCTGTCTGTCTGTCTGT  400

seq1  CTGACTACTGTCTGTCTGTCTGTTTTGTCTAGAACAATGAGCGGCATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTACTGTCTGTCTGTCTGTTTTGTCTAGAACAATGAGCGGCATTTT  450

seq1  TCTCATAATGCCATGGTGGTTGGGAGCAGAACAAACATTCTTTTATACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATAATGCCATGGTGGTTGGGAGCAGAACAAACATTCTTTTATACTG  500

seq1  AAAGTATTCATTGGGTTTAATGTCTTCTGGATTTGTATATAAACTGTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATTCATTGGGTTTAATGTCTTCTGGATTTGTATATAAACTGTCTT  550

seq1  ATTTTTCTGGGAGAAGTATTTACTTTTTAATCAAATTCTCAGGCTTATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTGGGAGAAGTATTTACTTTTTAATCAAATTCTCAGGCTTATGT  600

seq1  TTTACTCTTACACAGTAAGAAGTGTTACAAAAGTTTTCTTAAAATGAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTCTTACACAGTAAGAAGTGTTACAAAAGTTTTCTTAAAATGAGTC  650

seq1  AGAGAATTC  659
      |||||||||
seq2  AGAGAATTC  659

seq1: chr13_107829777_107830327
seq2: B6Ng01-082G19.g_68_618

seq1  GAATTCCACCTAGCCAAGATCCATTGCACAATTATCGGACACTAAATGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCTAGCCAAGATCCATTGCACAATTATCGGACACTAAATGCT  50

seq1  TTGTGTTAGGGAGGGAGAGCAATCTCACTGGTGAGATGAACTTTGCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTAGGGAGGGAGAGCAATCTCACTGGTGAGATGAACTTTGCACAG  100

seq1  CAACCGAGGTAAGAGATTGAGCCATGATAGTAAATGAGAGATGTCCAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCGAGGTAAGAGATTGAGCCATGATAGTAAATGAGAGATGTCCAGTA  150

seq1  TATACATAAGCCTTGAGGCAACAGTCTTAGGATGGAGGTCTCCAGAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATAAGCCTTGAGGCAACAGTCTTAGGATGGAGGTCTCCAGAAAAG  200

seq1  GCTCTTAAGAAAAGGGCAAGATTGAGCTGAGTTTTGGGGGATGTTAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTAAGAAAAGGGCAAGATTGAGCTGAGTTTTGGGGGATGTTAGAAT  250

seq1  TGAGAACCCTGGCATGGTGACCGTGCCTTCTTCTGCCTTTCTGTTTCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACCCTGGCATGGTGACCGTGCCTTCTTCTGCCTTTCTGTTTCTTT  300

seq1  CTGTATTAACTTCTTCTTTTGCTTCCAAATGGCTTTCTTCATTCAGTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTAACTTCTTCTTTTGCTTCCAAATGGCTTTCTTCATTCAGTAGA  350

seq1  CACATGCTCACTGTGGGATTTAAATTCTATATATTTATAGCCTTTCCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCTCACTGTGGGATTTAAATTCTATATATTTATAGCCTTTCCATA  400

seq1  GAAACAATAATTATGTTCTATGCAACAGTTCATCAAAAACAAAACAAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAATAATTATGTTCTATGCAACAGTTCATCAAAAACAAAACAAAGC  450

seq1  AAATGTCACTGTCAATCTTCAGCTACTGAGCATGTTTGAAGCCAGCCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCACTGTCAATCTTCAGCTACTGAGCATGTTTGAAGCCAGCCTAA  500

seq1  GGCTGCATGAGGATTGCTTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCATGAGGATTGCTTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGT  550

seq1  G  551
      |
seq2  G  551