BAC Information

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BAC

Clone NameB6Ng01-083H15
Chromosome13 (Build37)
Map Location 79,659,947 - 79,660,801
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666883
Downstream geneLOC666925, LOC382780, EG666933
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083H15.bB6Ng01-083H15.g
ACCDH897730DH897731
length1,230927
definitionDH897730|Mus musculus domesticus DNA, BAC clone: B6Ng01-083H15, 5' end.DH897731|Mus musculus domesticus DNA, BAC clone: B6Ng01-083H15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtaagaatgttgcctattcactaacattcagaattgcctctag
tatattgtaagagagatggtgaaagaaatcaggcattactatctactaca
tagagttagaaatctcatggcaagcttagcaaagtaagtgtagaattcat
attatagttctgtatggcaaattacattacttattagtagaaagtctccc
aacactatcacttagaataaaagccgagtttttcccatatacaggaattt
acaatggtttaggaagtagattgggctgtggttttagagtattgcattat
tcatgagaaggctagctagagcggaactccctaattagaaccacttaggc
atgaaagcccttgcccaggtagtataaaaacctcacacttggcttttaag
aatatggctggctttgtctcagttgttttattgcccagttcctgccagtc
tttgtgtttgcattcctctgttttgtgtaagagtcattcaacatccagta
acctcattggaccttgaagatgtgtcacctacttccctattttcttctgt
ataaaaagtttgatgcttgatttgacattacattcagatatagcacactc
ccttgtatctgtatttgtttgtcatttctcaccaactctttgccctgtct
gaaaccctgagttctcccacggattgaggtggccctgactgatgccagtc
tgtggcattttgggttaggagctttttgccttttgccttttctttgactg
tcgtgtcagtgttttctatggtatcttctgcacctgagattctctcttct
atctcttgtattctgttaaggatacttccatctatgactcctgatctctc
ccctaggttttctatctccagggttgtctccctttgtgatttctttattg
tttccatttccatttttagaccttggatttttttttcaattccctccctt
gtttggatatgtttcatgtattctaaagaattttttgtttttctctttaa
ggctgtttccctgtgtgtcctctatttctttaggggattatttatgtctc
taaagtctttatcatcattatcatcatcatggatgtgattttaaatgcag
tctgcttccaaggtttaagatcagaactttctgtgtgggggactgatccg
gtatgcaggagctggtcatggtagcattaccttcccttatacctggtgtc
ctggttagccgattggcgtcctgcaacgat
gaattctctattttcagttctagatcacaaggattcatttttctctatcc
aagtagatacacagagaacatatttgcctttacctggacagatgctgata
cccacttttctagccaacttacctagactgttctacctcggggattttga
gaccacagcaatttgatcaggccctggcttctggcttactgtcctctgta
gcccttctgtagaaattagccaagcagacatctttgctcttctaaatttc
ctctccagttgaggctattgggtctcatcttctaaagtccaattgtccac
ccctcaggtcaccaatttgggagtaacaattaccccaacgcgcaaagctt
agatagaaagctgtactacagagcaattgtgattaaaaaaaaaacaaaaa
aaccctgcatggtattggtatagcaacagacaagtagaccaatggaacag
aattgaagacccagagatgaatccacacacctatggtcacttgatctttg
acaagggagctaaaaccatccagtggaaaaaagacagtattttcaacaaa
tgtttctggcacaactggcagttatcatgtagaagaatgcgaattgatcc
attcctatctccttgtactaaggtcaaatctaagtggattaaggaactcc
acataaaaccagagacactgaaacttatataggagaaagtagggaaaatc
ctggaagatgtggtacagggggaaaattcctgaaaagaacagcaatggca
tgtgctgtaagatcgagaatcaataaatgggacctcataaagtttcaaag
cttctgcaaggcaaaagacaccgtcaataagacaaaagaccaccaacaga
ttgggaaaggatctttacctatccctaaatcagataggggactaatatcc
aatatatataaagaactcaagaaggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_79659947_79660801
seq2: B6Ng01-083H15.g_70_922

seq1  GAATTCTCTATTTTCAGTTCTAGATCACAAGGATTCATTTTTCTCTATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATTTTCAGTTCTAGATCACAAGGATTCATTTTTCTCTATCC  50

seq1  AAGTAGATACACAGAGAACATATTTGCCTTTACCTGGACAGATGCTGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGATACACAGAGAACATATTTGCCTTTACCTGGACAGATGCTGATA  100

seq1  CCCACTTTTCTAGCCAACTTACCTAGACTGTTCTACCTCGGGGATTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTTTCTAGCCAACTTACCTAGACTGTTCTACCTCGGGGATTTTGA  150

seq1  GACCACAGCAATTTGATCAGGCCCTGGCTTCTGGCTTACTGTCCTCTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACAGCAATTTGATCAGGCCCTGGCTTCTGGCTTACTGTCCTCTGTA  200

seq1  GCCCTTCTGTAGAAATTAGCCAAGCAGACATCTTTGCTCTTCTAAATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTCTGTAGAAATTAGCCAAGCAGACATCTTTGCTCTTCTAAATTTC  250

seq1  CTCTCCAGTTGAGGCTATTGGGTCTCATCTTCTAAAGTCCAATTGTCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGTTGAGGCTATTGGGTCTCATCTTCTAAAGTCCAATTGTCCAC  300

seq1  CCCTCAGGTCACCAATTTGGGAGTAACAATTACCCCAACGCGCAAAGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAGGTCACCAATTTGGGAGTAACAATTACCCCAACGCGCAAAGCTT  350

seq1  AGATAGAAAGCTGTACTACAGAGCAATTGTGATTAAAAAAAAAACAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGAAAGCTGTACTACAGAGCAATTGTGATTAAAAAAAAAACAAAAA  400

seq1  AACCCTGCATGGTATTGGTATAGCAACAGACAAGTAGACCAATGGAACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGCATGGTATTGGTATAGCAACAGACAAGTAGACCAATGGAACAG  450

seq1  AATTGAAGACCCAGAGATGAATCCACACACCTATGGTCACTTGATCTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAAGACCCAGAGATGAATCCACACACCTATGGTCACTTGATCTTTG  500

seq1  ACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGACAGTATTTTCAACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGACAGTATTTTCAACAAA  550

seq1  TGTTTCTGGCACAACTGGCAGTTATCATGTAGAAGAATGCGAATTGATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTGGCACAACTGGCAGTTATCATGTAGAAGAATGCGAATTGATCC  600

seq1  ATTCCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATTAAGGAACTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATTAAGGAACTCC  650

seq1  ACATAAAACCAGAGACACTGAAACTTATATAGGAGAAAGTAGGGAAAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAACCAGAGACACTGAAACTTATATAGGAGAAAGTAGGGAAAATC  700

seq1  CTGGAAGATGTGGGTACAGGGGGAAAATTCCTGAAAAGAACAGCAATGGC  750
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGATGT-GGTACAGGGGGAAAATTCCTGAAAAGAACAGCAATGGC  749

seq1  ATGTGCTGTAAGATCGAGAATCAATAAATGGGACCTCATAAAGTTTCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCTGTAAGATCGAGAATCAATAAATGGGACCTCATAAAGTTTCAAA  799

seq1  GCTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACA  850
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GCTTCTGCAAGGCAAAAGACACCGTCAATAAGAC-AAAAGACCACCAACA  848

seq1  GATTG  855
      |||||
seq2  GATTG  853