BAC Information

Click to search

BAC

Clone NameB6Ng01-083N24
Chromosome13 (Build37)
Map Location 73,470,914 - 73,471,436
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042828, LOC100042832, LOC100042836, Irx2, LOC621486, Irx4, LOC100042864, Ndufs6, Mrpl36
Downstream geneAytl2, Slc6a3, Clptm1l, Tert, Slc6a18, Slc6a19, Slc12a7, Nkd2, EG666360, Trip13, Brd9, Zdhhc11, LOC100042909, 2900041A09Rik, LOC621824, Cep72, Slc9a3, Exoc3, Ahrr, Pdcd6, Sdha
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083N24.bB6Ng01-083N24.g
ACCDH898011DH898012
length5251,135
definitionDH898011|Mus musculus domesticus DNA, BAC clone: B6Ng01-083N24, 5' end.DH898012|Mus musculus domesticus DNA, BAC clone: B6Ng01-083N24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggaaataaaaggatgacaaatgtcctgtgattgtttatttctc
caccttcagtgaaaggagccagttcaagccagattagattatatgcaagg
caggtttactgggtagctactctcaggtgggtgagttcactagccacaag
gactaaggccaggaaggtcaccatggggaaagtgggggaaggggagaaag
aaaggtgtgcgcgtggtggggggagacagagacacactgagagacagaca
gagacagaaagagagaaaaaaagaggagtagtaagaagaggagaagacca
aaatgtttggattatataggtaggagcccctgggggaagagcagcccagc
ccctgggctggagagttcaggttcgtggggcagggtatgacaggtaggga
ctgagggatgctgggagaaccagcaggccatgtctgctttgatatgtaac
gtattcacctgtttcccttgtcctggggcctgaaaccaattgccctgtat
ccctattacacaagacaggcacacc
gaattccaacagaattaggagacttcaataccctgctctgaccaataggc
aggacatcctgaaaataaagaaataaacagagagactggacttaaatgac
accaaatctcaaatgcacataacaaagcatgccccccaccttctgacctt
ggaactggagttacagatggctgtgagtcaccctgtagatgctgggcctc
atctgggccttcttcaagaacctccactgctcttaactacagagccattg
ctctagtaccttactttatccatcttttcaaagaattttttcacacagat
ttttctcagcagtacatggaactttcttcaaaggagttcacatattagaa
cataatcaagtcttaaaaacatattagatatttgaaattattcccggaat
aaatctaggtatcaaccatgagaggaaatccaagaagaccatgatatagt
atttaaacaacatactgttaaacgataagtaggtccctaaagaagttggg
actcccaggactcaaagggagggaccttacatgaaatgcctgacagtagg
gagagggaatttatagagcccacctccagcaggaagacatcaagtgagag
atgtggttaccatcccacagtcatacctgacccataattgttcctgtcta
taagaactgcagggatggaaatggagaggagcctgaggaaaagaaagtcc
agcaacaggcccaaagtgggatccagctcaaggggaggtccaaaggcctg
acactattactgaggttatggagtgttcacagaaaggaatctatcatgac
tgccctccgaaagacccaacaagcagctgaaagagtcagatgcagatatt
tgtacccaaccaatggacagaagcagctgacccctgttgttgaattaggg
aaggctgaaagaagctaaggagatggtgatcctgcagaggactatcagtc
tcaattatctggaccccgagatctctcaacactgagccaccaaacagaca
gcatacatcagctgatatgaggccccaacacacatttcagtagagactac
tgggtctgtgtcattcagagatgatgcacaaaccctcagagactggtggt
ccagacagttagaagtcatgttgggttggactgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_73470914_73471436
seq2: B6Ng01-083N24.b_50_573 (reverse)

seq1  GTGTGCCTGTC-ACTGTATTAGTGATACAGGACAATTGGTTTCAGGCCCC  49
      |||||||||||   |||| ||| |||||||| ||||||||||||||||||
seq2  GTGTGCCTGTCTTGTGTAATAGGGATACAGGGCAATTGGTTTCAGGCCCC  50

seq1  AGGACAAGGGACTGAGGTGTATACTTTACATATCAAAGCAGACCTGCCCT  99
      |||||||||||   ||||| |||| |||||||||||||||||| || |||
seq2  AGGACAAGGGAAACAGGTGAATACGTTACATATCAAAGCAGACATGGCCT  100

seq1  GCTGGTTCTCCCAGCATCCCTCAGTCCCTACCTGTCATACCCTGCCCCAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTTCTCCCAGCATCCCTCAGTCCCTACCTGTCATACCCTGCCCCAC  150

seq1  AAACCTGAACTCTCCAGCCCAGGGGCTGGGCTGCTCTTCCCCCAGGGGCT  199
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTGAACTCTCCAGCCCAGGGGCTGGGCTGCTCTTCCCCCAGGGGCT  200

seq1  CCTACCTATATAATCCAAACATTTTGGTCTTCTCCTCTTCTTACTACTCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCTATATAATCCAAACATTTTGGTCTTCTCCTCTTCTTACTACTCC  250

seq1  TCTTTTTTTCTCTCTTTCTGTCTCTGTCTGTCTCTCTGTGTGTCTCTGTC  299
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCTTTTTTTCTCTCTTTCTGTCTCTGTCTGTCTCTCAGTGTGTCTCTGTC  300

seq1  TCCCCCCACCACGCGCACACCTTTCTTTCTCCCCTTCCCCCACTTTCCCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCCACCACGCGCACACCTTTCTTTCTCCCCTTCCCCCACTTTCCCC  350

seq1  ATGGTGACCTTCCTGGCCTTAGTCCTTGTGGCTAGTGAACTCACCCACCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGACCTTCCTGGCCTTAGTCCTTGTGGCTAGTGAACTCACCCACCT  400

seq1  GAGAGTAGCTACCCAGTAAACCTGCCTTGCATATAATCTAATCTGGCTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTAGCTACCCAGTAAACCTGCCTTGCATATAATCTAATCTGGCTTG  450

seq1  AACTGGCTCCTTTCACTGAAGGTGGAGAAATAAACAATCACAGGACATTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGCTCCTTTCACTGAAGGTGGAGAAATAAACAATCACAGGACATTT  500

seq1  GTCATCCTTTTATTTCCAGAATTC  523
      ||||||||||||||||||||||||
seq2  GTCATCCTTTTATTTCCAGAATTC  524