BAC Information

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BAC

Clone NameB6Ng01-084N23
Chromosome13 (Build37)
Map Location 102,045,177 - 102,188,337
singlet/doubletdoublet
Overlap gene4933416M06Rik, LOC100039971, LOC100039983
Upstream geneBirc1c-ps1, Birc1f, EG667838, Naip1, Gtf2h2, Ocln, LOC667861, Marveld2, Rad17, Taf9, Ccdc125, Cdk7, Mrps36, Cenph, Ccnb1, Slc30a5, LOC619865, LOC619917, EG619937
Downstream genePik3r1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084N23.bB6Ng01-084N23.g
ACCDH898700DH898701
length1,131942
definitionDH898700|Mus musculus domesticus DNA, BAC clone: B6Ng01-084N23, 5' end.DH898701|Mus musculus domesticus DNA, BAC clone: B6Ng01-084N23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,187,180 - 102,188,337)(102,045,177 - 102,046,111)
sequence
gaattctgctactcgagcctttttgccttctgcagggacaacttgctgac
agtaaatgcttctccacagagagccttccttctcaagccagatgatattt
gacctgtgtgttaaattcttccccactcctcactgtggctgcccctcctc
tactcagaacacacccagcttccaaagcctgctaaatattctatctagta
ccaaagaggattgccttgtagataactacttgcctccttaacttgggctt
gttatgggacctcctgacacttcaggctgccaaaaacaactagcaatcct
tgctatcaacattccattgcttctccaagtcccggcacttagggaagccc
caccttcccagaacaaagcccatctttactcatgccatacatctctgcat
tctttgttcccttgctaggttgtgtccctccagcttttaagcaagctagt
tctcccttcaacaagggagttcagttttgtggttgtttaagctgtctagg
acagaaggttagaatttaagaatcagaaatcatgtctttcagtcctgact
ctggaactaagagaattcccagatacagggttcaaagtcaccagctaaaa
ggacaaagtagcatacaccaataatcttatcactccagaggtcaaggcag
gagttccacatgtttgaggctagcgtacaccacagagtaagaccctgttt
taagaaaaaaaaaattaaaaaaaaaaagtaaaacatagtgctaggttgca
ggttacaacaacccttttgactcataaaaccaacccctgaccccaggaat
gttctttccttctatatgcctcatttcatagcctcaaagcagcagatgct
ttcaactagacatcttcaactggaggttaaacaaaaagcaagcaaacaaa
caaacaaaacaaaaaaaaaacaccttaacatagatctgaggcagacccat
cccttccactgctcccaaacacagttttttttctggttcctctctgtaag
caggatatcctcaaacaggactagtgtcagatttcatttcctctctccct
tatcccatatcattcatcagcttcaaggtccatatctacatgaatctagc
catcgtgccctcctgtcaacatagaatgttt
gaattcactttctctctctttctttctttcttccttccttccttccttcc
tttctttctttctttctttctttctttctttctttctttctttctttctt
tctttctttctgttttttttttttttttttttttttttttggtttgttgt
ttttttaaaacagggtttctctgtgtagccctggctgtcctggaactcac
tctgtagaccaggctggccttgaactcagaaatccacctgcctctgcctc
ccaagtgctgggattaaagacatgcaccaccactgcctgacaagaattca
ctttcttgtatggggcaattttgtccctttctatgtaggtgagtcactca
gcaggctctttgtcaatgatacaagatttttatatttggccctaagggat
gctactttccataactgtgagcttactgtttattgctgcctttggatctt
ttagttcattttagtaacccaagctcaatccagggtttaacagactcaag
tgaatgaaaaaaaagtatggtttgcccacagcgtgcatggcagttacttg
aggagtcagcttatgaacataggtagaacagggtcccactcttcttctct
cctcttccatgtcaacccactctgatgcctgaagtccctagaaaggagcc
attcatttagactgatgctttactatctctatttaaatgtctctactaaa
atttcagtttgttacctatgaagactggtataataaaaaaaaaaatagcg
aacatattatctatttatcagcaatttctctcattagatttttcttaagc
tttaaccaatggttctctttgggttaatttataaaaatagagaactctgg
gccactgagatgatgcagggaaaggaaatcataagtcttcaagcctgaga
cttgagctctgtctctgggacccagatttttgaggagaaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_102187180_102188337
seq2: B6Ng01-084N23.b_46_1176 (reverse)

seq1  AAACATACTATGTTGACAGAGAGGGCAACAGATGGCTATGGAATCATGTA  50
      |||||| |||||||||||| |||||||   ||||||||  || |||||||
seq2  AAACATTCTATGTTGACAG-GAGGGCA--CGATGGCTA--GATTCATGTA  45

seq1  GGATATGAACTTGGAAAGGCTTGGATGAATTGATATGGGATTTAAAGAGA  100
       |||||| || | |||  |||  |||||| |||||||||||   ||| ||
seq2  -GATATGGACCTTGAA--GCT--GATGAA-TGATATGGGAT---AAGGGA  86

seq1  GAGA-GAAATGAAATCTGACACCTAGGCCCCTGGTTTGAGGATTATCCCT  149
      |||| |||||||||||||||| |||| ||    ||||||||| ||| |||
seq2  GAGAGGAAATGAAATCTGACA-CTAGTCC---TGTTTGAGGA-TAT-CCT  130

seq1  GCCTTACAGAGAGGAACCCAGGAAAAAAAACTGTGTTTGGGAGCAGTGGA  199
      | ||||||||||||||||   |||||||||||||||||||||||||||| 
seq2  G-CTTACAGAGAGGAACC--AGAAAAAAAACTGTGTTTGGGAGCAGTGG-  176

seq1  AAGGGATGGGTTCTGCCTCAGATCTATGTTAAGGTGTTTTTTTTTTGTTT  249
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAGGGATGGG-TCTGCCTCAGATCTATGTTAAGGTGTTTTTTTTTTGTTT  225

seq1  TGTTTTGTTTTGTTTTGCTTTGCTTTTTGTTTAACCTCCAGTTGAAGATG  299
      || |||||||   ||||| |||||||||||||||||||||||||||||||
seq2  TG-TTTGTTT--GTTTGC-TTGCTTTTTGTTTAACCTCCAGTTGAAGATG  271

seq1  TCTAGTTGAAAGCATCTGCTGCTTTGAGGCTATGAAATGAGGCATATAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTTGAAAGCATCTGCTGCTTTGAGGCTATGAAATGAGGCATATAGA  321

seq1  AGGAAAGAACATTCCTGGGGTCAGGGGTTGGTTTTATGAGTCAAAAGGGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGAACATTCCTGGGGTCAGGGGTTGGTTTTATGAGTCAAAAGGGT  371

seq1  TGTTGTAACCTGCAACCTAGCACTATGTTTTAC-TTTTTTTTTTAATTTT  448
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGTTGTAACCTGCAACCTAGCACTATGTTTTACTTTTTTTTTTTAATTTT  421

seq1  TTTTTTCTTAAAACAGGGTCTTACTCTGTGGTGTACGCTAGCCTCAAACA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTAAAACAGGGTCTTACTCTGTGGTGTACGCTAGCCTCAAACA  471

seq1  TGTGGAACTCCTGCCTTGACCTCTGGAGTGATAAGATTATTGGTGTATGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAACTCCTGCCTTGACCTCTGGAGTGATAAGATTATTGGTGTATGC  521

seq1  TACTTTGTCCTTTTAGCTGGTGACTTTGAACCCTGTATCTGGGAATTCTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGTCCTTTTAGCTGGTGACTTTGAACCCTGTATCTGGGAATTCTC  571

seq1  TTAGTTCCAGAGTCAGGACTGAAAGACATGATTTCTGATTCTTAAATTCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTCCAGAGTCAGGACTGAAAGACATGATTTCTGATTCTTAAATTCT  621

seq1  AACCTTCTGTCCTAGACAGCTTAAACAACCACAAAACTGAACTCCCTTGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTCTGTCCTAGACAGCTTAAACAACCACAAAACTGAACTCCCTTGT  671

seq1  TGAAGGGAGAACTAGCTTGCTTAAAAGCTGGAGGGACACAACCTAGCAAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGGAGAACTAGCTTGCTTAAAAGCTGGAGGGACACAACCTAGCAAG  721

seq1  GGAACAAAGAATGCAGAGATGTATGGCATGAGTAAAGATGGGCTTTGTTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAAAGAATGCAGAGATGTATGGCATGAGTAAAGATGGGCTTTGTTC  771

seq1  TGGGAAGGTGGGGCTTCCCTAAGTGCCGGGACTTGGAGAAGCAATGGAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGGTGGGGCTTCCCTAAGTGCCGGGACTTGGAGAAGCAATGGAAT  821

seq1  GTTGATAGCAAGGATTGCTAGTTGTTTTTGGCAGCCTGAAGTGTCAGGAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATAGCAAGGATTGCTAGTTGTTTTTGGCAGCCTGAAGTGTCAGGAG  871

seq1  GTCCCATAACAAGCCCAAGTTAAGGAGGCAAGTAGTTATCTACAAGGCAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCATAACAAGCCCAAGTTAAGGAGGCAAGTAGTTATCTACAAGGCAA  921

seq1  TCCTCTTTGGTACTAGATAGAATATTTAGCAGGCTTTGGAAGCTGGGTGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTTGGTACTAGATAGAATATTTAGCAGGCTTTGGAAGCTGGGTGT  971

seq1  GTTCTGAGTAGAGGAGGGGCAGCCACAGTGAGGAGTGGGGAAGAATTTAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAGTAGAGGAGGGGCAGCCACAGTGAGGAGTGGGGAAGAATTTAA  1021

seq1  CACACAGGTCAAATATCATCTGGCTTGAGAAGGAAGGCTCTCTGTGGAGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGGTCAAATATCATCTGGCTTGAGAAGGAAGGCTCTCTGTGGAGA  1071

seq1  AGCATTTACTGTCAGCAAGTTGTCCCTGCAGAAGGCAAAAAGGCTCGAGT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTACTGTCAGCAAGTTGTCCCTGCAGAAGGCAAAAAGGCTCGAGT  1121

seq1  AGCAGAATTC  1158
      ||||||||||
seq2  AGCAGAATTC  1131

seq1: chr13_102045177_102046111
seq2: B6Ng01-084N23.g_71_1012

seq1  GAATTCACTTTCTCTCTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTC-  49
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAATTCACTTTCTCTCTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCC  50

seq1  ---CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  96
         |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  100

seq1  TCTTTCTTTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTGTTGT  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTGTTGT  150

seq1  TTTTTTAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCAC  196
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAAACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCAC  200

seq1  TCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCACCTGCCTCTGCCTC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCACCTGCCTCTGCCTC  250

seq1  CCAAGTGCTGGGATTAAAGACATGCACCACCACTGCCTGACAAGAATTCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGCTGGGATTAAAGACATGCACCACCACTGCCTGACAAGAATTCA  300

seq1  CTTTCTTGTATGGGGCAATTTTGTCCCTTTCTATGTAGGTGAGTCACTCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTGTATGGGGCAATTTTGTCCCTTTCTATGTAGGTGAGTCACTCA  350

seq1  GCAGGCTCTTTGTCAATGATACAAGATTTTTATATTTGGCCCTAAGGGAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTCTTTGTCAATGATACAAGATTTTTATATTTGGCCCTAAGGGAT  400

seq1  GCTACTTTCCATAACTGTGAGCTTACTGTTTATTGCTGCCTTTGGATCTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTTCCATAACTGTGAGCTTACTGTTTATTGCTGCCTTTGGATCTT  450

seq1  TTAGTTCATTTTAGTAACCCAAGCTCAATCCAGGGTTTAACAGACTCAAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTCATTTTAGTAACCCAAGCTCAATCCAGGGTTTAACAGACTCAAG  500

seq1  TGAATGAAAAAAAAGTATGGTTTGCCCACAGCGTGCATGGCAGTTACTTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAAAAAAAAGTATGGTTTGCCCACAGCGTGCATGGCAGTTACTTG  550

seq1  AGGAGTCAGCTTATGAACATAGGTAGAACAGGGTCCCACTCTTCTTCTCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTCAGCTTATGAACATAGGTAGAACAGGGTCCCACTCTTCTTCTCT  600

seq1  CCTCTTCCATGTCAACCCACTCTGATGCCTGAAGTCCCTAGAAAGGAGCC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCCATGTCAACCCACTCTGATGCCTGAAGTCCCTAGAAAGGAGCC  650

seq1  ATTCATTTAGACTGATGCTTTACTATCTCTATTT-AATGTCTCTACTAAA  695
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATTCATTTAGACTGATGCTTTACTATCTCTATTTAAATGTCTCTACTAAA  700

seq1  ATTTCAGTTTGTTACCTATGAAGACTGGTATAAT-AAAAAAAAAATAGCG  744
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATTTCAGTTTGTTACCTATGAAGACTGGTATAATAAAAAAAAAAATAGCG  750

seq1  AACATATTATCTA-TTATCAGCAATTTCTCTCATTAGA-TTTTCTTAAGC  792
      ||||||||||||| |||||||||||||||||||||||| |||||||||||
seq2  AACATATTATCTATTTATCAGCAATTTCTCTCATTAGATTTTTCTTAAGC  800

seq1  TTTAACCAATGGTTCTCTTTGGGTTAATTTATAAAAATAGAGAACTCTGG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACCAATGGTTCTCTTTGGGTTAATTTATAAAAATAGAGAACTCTGG  850

seq1  GCCACTGAGATGATGCAGGG-AAGGAAATCATAAGTCTTCAAGCCTGAAG  891
      |||||||||||||||||||| |||||||||||||||||||||||||| ||
seq2  GCCACTGAGATGATGCAGGGAAAGGAAATCATAAGTCTTCAAGCCTG-AG  899

seq1  ACTTGAGCTCTGTCTCTGGGACCCAGATTTTTGAGGGAGAAAAC  935
      |||||||||||||||||||||||||||||||||| |||||||||
seq2  ACTTGAGCTCTGTCTCTGGGACCCAGATTTTTGA-GGAGAAAAC  942