BAC Information

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BAC

Clone NameB6Ng01-086D07
Chromosome13 (Build37)
Map Location 114,497,919 - 114,649,258
singlet/doubletdoublet
Overlap geneEG632832, LOC622701, LOC100040927, Arl15
Upstream gene9130023D20Rik, Ppap2a, LOC100041282, Skiv2l2, Dhx29, LOC667756, Ccnu, EG622408, EG622422, 2310016C16Rik, Cdc20b, Gzma, 1700084D21Rik, Gzmk, Esm1, BC067074, LOC100040888, Snag1, Hspb3
Downstream geneA430090L17Rik, Ndufs4, LOC100040958, Fst, 4930467J12Rik, Mocs2, Itga2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086D07.bB6Ng01-086D07.g
ACCDH899667DH899668
length1,153939
definitionDH899667|Mus musculus domesticus DNA, BAC clone: B6Ng01-086D07, 5' end.DH899668|Mus musculus domesticus DNA, BAC clone: B6Ng01-086D07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,648,101 - 114,649,258)(114,497,919 - 114,498,855)
sequence
gaattctctcctatctacgtccaaatgtggaaaaagaattaaagaggaaa
aagaaatttgagattacaaaaatcaaacacaataaaggtcaaacgaataa
aaaaaaaaaaaaaaacctgcaagggcagagggggcaggacttcctgtggc
agaaggtaatggggttttaatcagaaactgatttgattgacaggccatca
caactgagctctgggcaacaccatctgccaccactcagggctcctcccca
tttcccctagtcccacaattaccttgacaaagaaagaggcaaaacaaaga
ggtaaaaacatcacggaaaggttaatggccaccaccgattacaagctatt
atgctgcagctgttttagtttaagttaaattacatttatttatttagtat
atgtgtatacacacacacacacacagagacacacacacacacacactcac
acacacacacactcacacacacactcacacactcacacacacacacacac
acacagagacacacacacactcacacacacactcacacacacacactaac
tcacacacacacacacacacacacacacacacacacacactcacaccgcc
tgtcaggacattctgggggagtttgttctcttttcccatcctaagagttc
caagacagagctcaaggagtcagggttggcagcaagcagcttcacctacc
gagccatttcactcacaagtgttttgtttttaattctaaactataatttt
gagtctatgaatatcaacattaaattttcaatgtgcctgatttctaaaat
gaatagaaagaaaagcctaacacagatcccagtgcatttcccatatggaa
acagattcgattcactaacaaataatgtttttacataaatgatgttaatg
agataccatgcgacatgtcagtctccctctcccccagtcttcctaaactt
cagactatgtcccatccttttctttagctcctctcaaaactctctaagaa
cctgttagaacactgcgtttccataccccttctttcccccacctcctcgt
acccccacccgccaatacctaatcccaaatgggaagctcagtagattgat
tccaatcaaaggccagactggacttcaagtgagaatggtctcaaaagaag
ggg
gaattctgtccccagcaaagtctttattcagggataacggatgcaaaggg
aatttggccggggctctaacagacagttggtctgtgttcatcatggctgc
cccatgtagaacttaagaggagtttgaaagcacagcactgaactaaaagc
agagctctagcctcatgggagatcttctgagggttgtccacttaatgtaa
agagagacagtccaaacaaccagaaacgtttactgcaataggaatatgct
ttaatctggctgcattcaggaggctgacaccaggagaaacattttaaaag
caataaaggagaaatgtacacaagctacttggatacaaagttctttgatc
atggaggctatgcctggcaactctctgaaatgttgcaaacttaaagaata
ttaaagacagccaggcagtggtggcgcatgcctttaatcccagcatttgg
gaggcagaggcaggtgaatttctgagtttgaggccagcctggtctacaga
gtgagttccaggacagccagagaaatacagagaaaccctgtctcagaaaa
acaaaacaaaaaacaaaaaaaaacaaacaaaaaaagttaaagacatacat
tattacacaaatagaagcaagatttcaaaacacagtgtgtgtagggggag
aaatctctgttggtccttgagaaagccctgaagaaagtcattgtctcaaa
cagacctggacaatttccagggtttttttttttttttttttacaatttgt
atctaccagatgatcctgggaaaaatcctcttttcggggcttattaattt
ctttgttttattaataaaagaatataaaaatagattcaagcagatgattg
aattttattagagtttaaaagaacactccgggggttgaaaaactatagac
tctcagtagctgcccaagggaggaggagatgggggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_114648101_114649258
seq2: B6Ng01-086D07.b_49_1201 (reverse)

seq1  CCCCTTCTTTTTGAGACCA-TCTCACTTTGAAGTCCAGTCTGG-CTTTGA  48
      ||||||| ||||||||||| |||||| |||||||||||||||| ||||||
seq2  CCCCTTC-TTTTGAGACCATTCTCAC-TTGAAGTCCAGTCTGGCCTTTGA  48

seq1  TTTGGAATCAATCCTACCTGAGCCTTCCCATTTTGGGAATAGGGTATGGC  98
       ||||||||||| ||| ||||| ||||||| ||||||| ||||   ||||
seq2  -TTGGAATCAAT-CTA-CTGAG-CTTCCCA-TTTGGGATTAGGTATTGGC  93

seq1  -GGTGGGGGTACGAGGAGGTGGGGGAAAGAAGGGGTATGGAAACGCAGTG  147
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGGGTACGAGGAGGTGGGGGAAAGAAGGGGTATGGAAACGCAGTG  143

seq1  TTCCTAACAGGTTCTTTAGAGAGTTTTTGAGAGGAGCTAAAGAAAGGGAT  197
      || ||||||||||| |||||||| ||||||||||||||||||||| ||||
seq2  TT-CTAACAGGTTC-TTAGAGAG-TTTTGAGAGGAGCTAAAGAAAAGGAT  190

seq1  GGGACATAGTCTGAAGTTTAGGAAGACTGGGGGAG-GGGAGACTGACATG  246
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGGACATAGTCTGAAGTTTAGGAAGACTGGGGGAGAGGGAGACTGACATG  240

seq1  TCGCATGGTATCTCA-TAACATCATTTTATGTAAAAACATTATTTGTTAG  295
      ||||||||||||||| |||||||| |||||||||||||||||||||||||
seq2  TCGCATGGTATCTCATTAACATCA-TTTATGTAAAAACATTATTTGTTAG  289

seq1  TGAATCGAATCTGTTTCCATATGGGAAATGCACTTGGGATCTGTGTTAGG  345
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGAATCGAATCTGTTTCCATATGGGAAATGCAC-TGGGATCTGTGTTAGG  338

seq1  CTTTTCTTTCTATTCATTTTAGAAATCAGGCACATTGAAAA-TTAATGTT  394
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTTTTCTTTCTATTCATTTTAGAAATCAGGCACATTGAAAATTTAATGTT  388

seq1  GATATTCATAGACTCAAAATTATAG-TTAGAATTAAAAACAAAACACTTG  443
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GATATTCATAGACTCAAAATTATAGTTTAGAATTAAAAACAAAACACTTG  438

seq1  TGAGTGAAATGGCTCGGTAGGTGAAGCTGCTTGCTGCCAACCCTGACTCC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGAAATGGCTCGGTAGGTGAAGCTGCTTGCTGCCAACCCTGACTCC  488

seq1  TTGAGCTCTGTCTTGGAACTCTTAGGATGGGAAAAGAGAACAAACTCCCC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTCTGTCTTGGAACTCTTAGGATGGGAAAAGAGAACAAACTCCCC  538

seq1  CAGAATGTCCTGACAGGCGGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGTCCTGACAGGCGGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTG  588

seq1  TGTGTGTGTGTGTGAGTTAGTGTGTGTGTGTGAGTGTGTGTGTGAGTGTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGAGTTAGTGTGTGTGTGTGAGTGTGTGTGTGAGTGTG  638

seq1  TGTGTGTCTCTGTGTGTGTGTGTGTGTGTGTGAGTGTGTGAGTGTGTGTG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTCTCTGTGTGTGTGTGTGTGTGTGTGAGTGTGTGAGTGTGTGTG  688

seq1  TGAGTGTGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTCTCTGTGTGTGTG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTCTCTGTGTGTGTG  738

seq1  TGTGTGTATACACATATACTAAATAAATAAATGTAATTTAACTTAAACTA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTATACACATATACTAAATAAATAAATGTAATTTAACTTAAACTA  788

seq1  AAACAGCTGCAGCATAATAGCTTGTAATCGGTGGTGGCCATTAACCTTTC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCTGCAGCATAATAGCTTGTAATCGGTGGTGGCCATTAACCTTTC  838

seq1  CGTGATGTTTTTACCTCTTTGTTTTGCCTCTTTCTTTGTCAAGGTAATTG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGATGTTTTTACCTCTTTGTTTTGCCTCTTTCTTTGTCAAGGTAATTG  888

seq1  TGGGACTAGGGGAAATGGGGAGGAGCCCTGAGTGGTGGCAGATGGTGTTG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTAGGGGAAATGGGGAGGAGCCCTGAGTGGTGGCAGATGGTGTTG  938

seq1  CCCAGAGCTCAGTTGTGATGGCCTGTCAATCAAATCAGTTTCTGATTAAA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGCTCAGTTGTGATGGCCTGTCAATCAAATCAGTTTCTGATTAAA  988

seq1  ACCCCATTACCTTCTGCCACAGGAAGTCCTGCCCCCTCTGCCCTTGCAGG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCATTACCTTCTGCCACAGGAAGTCCTGCCCCCTCTGCCCTTGCAGG  1038

seq1  TTTTTTTTTTTTTTTTTATTCGTTTGACCTTTATTGTGTTTGATTTTTGT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTATTCGTTTGACCTTTATTGTGTTTGATTTTTGT  1088

seq1  AATCTCAAATTTCTTTTTCCTCTTTAATTCTTTTTCCACATTTGGACGTA  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCAAATTTCTTTTTCCTCTTTAATTCTTTTTCCACATTTGGACGTA  1138

seq1  GATAGGAGAGAATTC  1158
      |||||||||||||||
seq2  GATAGGAGAGAATTC  1153

seq1: chr13_114497919_114498855
seq2: B6Ng01-086D07.g_68_1006

seq1  GAATTCTGTCCCCAGCAAAGTCTTTATTCAGGGATAACGGATGCAAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCCCCAGCAAAGTCTTTATTCAGGGATAACGGATGCAAAGGG  50

seq1  AATTTGGCCGGGGCTCTAACAGACAGTTGGTCTGTGTTCATCATGGCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGCCGGGGCTCTAACAGACAGTTGGTCTGTGTTCATCATGGCTGC  100

seq1  CCCATGTAGAACTTAAGAGGAGTTTGAAAGCACAGCACTGAACTAAAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGTAGAACTTAAGAGGAGTTTGAAAGCACAGCACTGAACTAAAAGC  150

seq1  AGAGCTCTAGCCTCATGGGAGATCTTCTGAGGGTTGTCCACTTAATGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCTAGCCTCATGGGAGATCTTCTGAGGGTTGTCCACTTAATGTAA  200

seq1  AGAGAGACAGTCCAAACAACCAGAAACGTTTACTGCAATAGGAATATGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGACAGTCCAAACAACCAGAAACGTTTACTGCAATAGGAATATGCT  250

seq1  TTAATCTGGCTGCATTCAGGAGGCTGACACCAGGAGAAACATTTTAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTGGCTGCATTCAGGAGGCTGACACCAGGAGAAACATTTTAAAAG  300

seq1  CAATAAAGGAGAAATGTACACAAGCTACTTGGATACAAAGTTCTTTGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAGGAGAAATGTACACAAGCTACTTGGATACAAAGTTCTTTGATC  350

seq1  ATGGAGGCTATGCCTGGCAACTCTCTGAAATGTTGCAAACTTAAAGAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGCTATGCCTGGCAACTCTCTGAAATGTTGCAAACTTAAAGAATA  400

seq1  TTAAAGACAGCCAGGCAGTGGTGGCGCATGCCTTTAATCCCAGCATTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGACAGCCAGGCAGTGGTGGCGCATGCCTTTAATCCCAGCATTTGG  450

seq1  GAGGCAGAGGCAGGTGAATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAGGCAGGTGAATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGA  500

seq1  GTGAGTTCCAGGACAGCCAGAGAAATACAGAGAAACCCTGTCTCAGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTCCAGGACAGCCAGAGAAATACAGAGAAACCCTGTCTCAGAAAA  550

seq1  ACAAAACAAAAAACAAAAAAAAACAAACAAAAAAAGTTAAAGACATACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAAAACAAAAAAAAACAAACAAAAAAAGTTAAAGACATACAT  600

seq1  TATTACACAAATAGAAGCAAGATTTCAAAACACAGTGTGTGTAGGGGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACACAAATAGAAGCAAGATTTCAAAACACAGTGTGTGTAGGGGGAG  650

seq1  AAATCTCTGTTGGTCCTTGAGAAAGCCCTGAAGAAAGTCATTGTCTCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCTGTTGGTCCTTGAGAAAGCCCTGAAGAAAGTCATTGTCTCAAA  700

seq1  CAGACCTGGACAATTTCCAGGGTTTTTTTTTTTTTTTTTTTACAATTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCTGGACAATTTCCAGGGTTTTTTTTTTTTTTTTTTTACAATTTGT  750

seq1  ATCTACCAGATGATCCTGGGAAAAATCCTCTTTTCGGGGCTTATTAATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACCAGATGATCCTGGGAAAAATCCTCTTTTCGGGGCTTATTAATTT  800

seq1  CTTTGTTTTATTAATAAAAGAATATAAAAATAGATTCAAGCAGATGATTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTTTATTAATAAAAGAATATAAAAATAGATTCAAGCAGATGATTG  850

seq1  AATTTTATTAGAGTTTAAAAGAACACTCC-GGGGTTGAAAAACTATAGAC  899
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AATTTTATTAGAGTTTAAAAGAACACTCCGGGGGTTGAAAAACTATAGAC  900

seq1  TCTCAGTAGCTGCCCAAGGGAGGAGGAGAT-GGGGTGGG  937
      |||||||||||||||||||||||||||||| ||||||||
seq2  TCTCAGTAGCTGCCCAAGGGAGGAGGAGATGGGGGTGGG  939