BAC Information

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BAC

Clone NameB6Ng01-089B14
Chromosome13 (Build37)
Map Location 109,284,225 - 109,284,995
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040820, Zswim6, 3021401N23Rik, 2810008M24Rik, Ndufa12l, Ercc8, LOC668123, LOC621498, Elovl7, LOC668129, LOC100040524, Depdc1b
Downstream genePde4d, EG668144, LOC621663, LOC100040968
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089B14.bB6Ng01-089B14.g
ACCDH901768DH901769
length825772
definitionDH901768|Mus musculus domesticus DNA, BAC clone: B6Ng01-089B14, 5' end.DH901769|Mus musculus domesticus DNA, BAC clone: B6Ng01-089B14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctttccaagacttttagcatgaagggatgtttaattttgtcaaa
tgcttttcagcatctaatgaaatgattatgtgctttttttttcctttgag
tttgtttatgtagtggattacattaatggatttccatatactgacccatc
cctgcgtctgtgggatgaagtctatttgattgtggtgaatgtttgttttg
atgtgttcttggattcggtttgtgaatattttattgagtatttttgcatc
aatgttcataagggaaattggtctgaagttctccttctttgttgggtctt
tgtgagatcttggtatcgacatataactgtggtttcatagaatgaattgg
gaagtgttccttctgtttctattttgtggaattgtttgaaagtattggta
ttaggtcttctttgaaggtttggtagaactctgcactaaacccatctggt
cctgggctttttttggttgggagacttttaatgattgcttctatttcctt
aggggttatgagattgcttagatcattcatctgatcctgatttaactttg
gtatttggtatctgtctagaaaattgtccatttcatccagattttccagt
tgtgttgagtatagtcttttatagtaggatctgatgggtttttttttttt
ttttttggctttctcagtttctcttgtatatctcccgtttcatttccgat
tttgttaattggatactgtctctgtgccccctggttagtttggctaaggg
ttactgctggtcgccatctggtggctctggggtagctgtttcctgtcctg
aaatggggctatggcctccggcaag
gaattcttcctcagcataagacctgacaagaaggagaaaaatctactttt
ttctgtggtcctccacgttcttttggcctctctgaagtgttatgtaatga
aatatgcaaagtctggagatttagtaagaaaaaatgttgggggggggtgt
tattaacatattgcttaaaccacacccatgcttccaacaaggcctcaaac
actaccacacagacagagaaggcataaactctggagccagactatctagg
ttcaaattccagctctggtctttcactgggagtttgagcacaatacctaa
cagcacttaaaaaaaaaaaaaagaattatcattttactgttttcattatt
aagatcattgtcatgctgtgctcaatatacaaaatgaaggtgaatcactc
agcatccacgtgcttaggtatggatccactcttatcacggactgcatctg
aggtaactttaaaaataccatgtttgtcttaagatctttgagatcaaagt
ccagtgagatgtgagttgctcctgtcagccttctacctggctgtcacatg
aactttgaaaccaactccacctttgatgcatccaataaggacacctaccc
aggatgtgacaaagaagagggaatcgaagcagacgtgattcgtagaatag
ttagcacagagttcaggcatgtttaaaaaaaaatagtcttgcatgaagag
aaaataataatggtgcccataatcttcattcatggtaatctaaatcaaaa
aagatttgaatgggtgggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_109284225_109284995
seq2: B6Ng01-089B14.g_69_840 (reverse)

seq1  CCCCCCCACCCATTCAAATCTTTTTTGA-TTAGAATACCATGAATGAAGA  49
      | |||||||||||||||||||||||||| ||||| |||||||||||||||
seq2  CACCCCCACCCATTCAAATCTTTTTTGATTTAGATTACCATGAATGAAGA  50

seq1  TTATGGGCACCATTATTATTTTCTCTTCATGCAAGACTATTTTTTTTTAA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGGCACCATTATTATTTTCTCTTCATGCAAGACTATTTTTTTTTAA  100

seq1  ACATGCCTGAACTCTGTGCTAACTATTCTACGAATCACGTCTGCTTCGAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCCTGAACTCTGTGCTAACTATTCTACGAATCACGTCTGCTTCGAT  150

seq1  TCCCTCTTCTTTGTCACATCCTGGGTAGGTGTCCTTATTGGATGCATCAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTTCTTTGTCACATCCTGGGTAGGTGTCCTTATTGGATGCATCAA  200

seq1  AGGTGGAGTTGGTTTCAAAGTTCATGTGACAGCCAGGTAGAAGGCTGACA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGAGTTGGTTTCAAAGTTCATGTGACAGCCAGGTAGAAGGCTGACA  250

seq1  GGAGCAACTCACATCTCACTGGACTTTGATCTCAAAGATCTTAAGACAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAACTCACATCTCACTGGACTTTGATCTCAAAGATCTTAAGACAAA  300

seq1  CATGGTATTTTTAAAGTTACCTCAGATGCAGTCCGTGATAAGAGTGGATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTATTTTTAAAGTTACCTCAGATGCAGTCCGTGATAAGAGTGGATC  350

seq1  CATACCTAAGCACGTGGATGCTGAGTGATTCACCTTCATTTTGTATATTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCTAAGCACGTGGATGCTGAGTGATTCACCTTCATTTTGTATATTG  400

seq1  AGCACAGCATGACAATGATCTTAATAATGAAAACAGTAAAATGATAATTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGCATGACAATGATCTTAATAATGAAAACAGTAAAATGATAATTC  450

seq1  TTTTTTTTTTTTTTAAGTGCTGTTAGGTATTGTGCTCAAACTCCCAGTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTAAGTGCTGTTAGGTATTGTGCTCAAACTCCCAGTGA  500

seq1  AAGACCAGAGCTGGAATTTGAACCTAGATAGTCTGGCTCCAGAGTTTATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCAGAGCTGGAATTTGAACCTAGATAGTCTGGCTCCAGAGTTTATG  550

seq1  CCTTCTCTGTCTGTGTGGTAGTGTTTGAGGCCTTGTTGGAAGCATGGGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCTGTCTGTGTGGTAGTGTTTGAGGCCTTGTTGGAAGCATGGGTG  600

seq1  TGGTTTAAGCAATATGTTAATAACACCCCCCCCCAACATTTTTTCTTACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTAAGCAATATGTTAATAACACCCCCCCCCAACATTTTTTCTTACT  650

seq1  AAATCTCCAGACTTTGCATATTTCATTACATAACACTTCAGAGAGGCCAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCCAGACTTTGCATATTTCATTACATAACACTTCAGAGAGGCCAA  700

seq1  AAGAACGTGGAGGACCACAGAAAAAAGTAGATTTTTCTCCTTCTTGTCAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACGTGGAGGACCACAGAAAAAAGTAGATTTTTCTCCTTCTTGTCAG  750

seq1  GTCTTATGCTGAGGAAGAATTC  771
      ||||||||||||||||||||||
seq2  GTCTTATGCTGAGGAAGAATTC  772