BAC Information

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BAC

Clone NameB6Ng01-089K24
Chromosome13 (Build37)
Map Location 62,850,114 - 63,024,582
singlet/doubletdoublet
Overlap geneLOC380850, LOC630951, Fbp2, Fbp1
Upstream geneBC052688, EG638502, LOC100041382, EG633250, EG624180, LOC100041420, LOC665444, EG630579, EG630594, LOC665455, LOC100041430, LOC100041962, LOC100041437, LOC100041979, LOC100041986, 8430426H19Rik, LOC100041455, 6720457D02Rik, EG665503, LOC100041493, LOC630857, EG630978, EG435366
Downstream geneLOC100042090, EG665524, 2010111I01Rik, Fancc, Ptch1, C030010C08Rik, 0610007P08Rik, 9330134C04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089K24.bB6Ng01-089K24.g
ACCDH902202DH902203
length3501,112
definitionDH902202|Mus musculus domesticus DNA, BAC clone: B6Ng01-089K24, 5' end.DH902203|Mus musculus domesticus DNA, BAC clone: B6Ng01-089K24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,024,233 - 63,024,582)(62,850,114 - 62,851,218)
sequence
cacccttttacaatttgtgtgtgtgagtgcctgctgtgtgtgtgcctgtt
gtgtatgtgtctaatgtgtatgtctattgcgtgtgtgtcagtgtttgtgt
gaatctattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgccttttgtgt
gtgtgtctagtgtgtatgtgtctaagtgaatctattgtgtgtgtgtcttc
tgtgtgtgtctattgtgtgtgtgtctattttgtggtctgtgtctctgtgt
gtgtaaatgatgtaattgtgtagtgttgttatatactaatacgaaatggg
gtgggatgggtcaggggtgcacaatagggaggaaaacaattttgtctact

gaattcaaaaagtcagggtgtggttctttaaaaaatgaaaattataaatt
aatgccagaaatggacttgggggaagatatatagcacacaggtatactgg
cactgacaaagaacaggcattccatggcagaggtaatggcattaataaaa
tactttttgatcttgcccctgtgtggactggtagttgctgagtcctgtaa
cctgacacacacagctgtacctaatgagtggcctgtgtttcaaaaatctg
acttaaccatgtcaatgagcatctctcacatccacataggacagtaccct
aagtggaaattcagtattcattggatcaacctaaatacttcaaattgtac
acccaccagttttgtgtgcttatattaaaatgtacaaattaacatgggct
aggaaatcacaaaatcacacatcctgtgcaactcagctccttcttcatat
tggtgagccctgcagctgagtgccttaaacttgagttagtctgagatcta
gctattgcctactctgtttcactctgcactgtacacaggacattgctcct
cctgttctgttctgagggcagaagcaatgcttcatgcaaatcctttccct
gttactgcaacgcacagtttattcatggagccaaatgggttaaaactctg
ttgtgctactaccctttaacgtaagaatacagaaactttaatcaagagga
aagcaaggccattgccctgggaaacaacagactgggatcagggccctgtg
aacaatatacctcctgtcagaaaaatgtgccagaaagggctgaaaatcca
gctgttctagaatcatatgtcttcccaggggagggaaacacttcaacaca
caattcaaagattaattaagaaaaaaaaaaatctactcttcactgggtgg
atttctgcctggacagactgactgctagctagtctgctctcctgaccaca
ccatatcctgaggcatcccaggagatcttgtttgcttaagctctgatacc
acagccaaagaccttccaggagatctgctgcacacaggacaattggagca
actgattaccaccttgtgactctcccctgaaagacaacacaatttgaagg
catctcaggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_63024233_63024582
seq2: B6Ng01-089K24.b_51_400 (reverse)

seq1  AGTAGACAAACTTGTTTTCCTCCCTATTGTGCACCCCTGACCCATCCCAC  50
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGTAGACAAAATTGTTTTCCTCCCTATTGTGCACCCCTGACCCATCCCAC  50

seq1  CCCATTTCGTATTAGTATATAACAACACTACACAATTACATCATTTACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTCGTATTAGTATATAACAACACTACACAATTACATCATTTACAC  100

seq1  ACACAGAGACACAGACCACAAAATAGACACACACACAATAGACACACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAGACACAGACCACAAAATAGACACACACACAATAGACACACACA  150

seq1  GAAGACACACACACAATAGATTCACTTAGACACATACACACTAGACACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACACACACACAATAGATTCACTTAGACACATACACACTAGACACAC  200

seq1  ACACAAAAGGCACACACACACACACACACACACACACACACAATAGATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAAGGCACACACACACACACACACACACACACACACAATAGATTC  250

seq1  ACACAAACACTGACACACACGCAATAGACATACACATTAGACACATACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAACACTGACACACACGCAATAGACATACACATTAGACACATACAC  300

seq1  AACAGGCACACACACAGCAGGCACACACACACACAAATTGTAAAAGGGTG  350
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AACAGGCACACACACAGCAGGCACTCACACACACAAATTGTAAAAGGGTG  350

seq1: chr13_62850114_62851218
seq2: B6Ng01-089K24.g_70_1181

seq1  GAATTCAAAAAGTCAGGGTGTGGTTCTTTAAAAAATGAAAATTATAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAAGTCAGGGTGTGGTTCTTTAAAAAATGAAAATTATAAATT  50

seq1  AATGCCAGAAATGGACTTGGGGGAAGATATATAGCACACAGGTATACTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCAGAAATGGACTTGGGGGAAGATATATAGCACACAGGTATACTGG  100

seq1  CACTGACAAAGAACAGGCATTCCATGGCAGAGGTAATGGCATTAATAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGACAAAGAACAGGCATTCCATGGCAGAGGTAATGGCATTAATAAAA  150

seq1  TACTTTTTGATCTTGCCCCTGTGTGGACTGGTAGTTGCTGAGTCCTGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTGATCTTGCCCCTGTGTGGACTGGTAGTTGCTGAGTCCTGTAA  200

seq1  CCTGACACACACAGCTGTACCTAATGAGTGGCCTGTGTTTCAAAAATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACACACACAGCTGTACCTAATGAGTGGCCTGTGTTTCAAAAATCTG  250

seq1  ACTTAACCATGTCAATGAGCATCTCTCACATCCACATAGGACAGTACCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACCATGTCAATGAGCATCTCTCACATCCACATAGGACAGTACCCT  300

seq1  AAGTGGAAATTCAGTATTCATTGGATCAACCTAAATACTTCAAATTGTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGAAATTCAGTATTCATTGGATCAACCTAAATACTTCAAATTGTAC  350

seq1  ACCCACCAGTTTTGTGTGCTTATATTAAAATGTACAAATTAACATGGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACCAGTTTTGTGTGCTTATATTAAAATGTACAAATTAACATGGGCT  400

seq1  AGGAAATCACAAAATCACACATCCTGTGCAACTCAGCTCCTTCTTCATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATCACAAAATCACACATCCTGTGCAACTCAGCTCCTTCTTCATAT  450

seq1  TGGTGAGCCCTGCAGCTGAGTGCCTTAAACTTGAGTTAGTCTGAGATCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGCCCTGCAGCTGAGTGCCTTAAACTTGAGTTAGTCTGAGATCTA  500

seq1  GCTATTGCCTACTCTGTTTCACTCTGCACTGTACACAGGACATTGCTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTGCCTACTCTGTTTCACTCTGCACTGTACACAGGACATTGCTCCT  550

seq1  CCTGTTCTGTTCTGAGGGCAGAAGCAATGCTTCATGCAAATCCTTTCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCTGTTCTGAGGGCAGAAGCAATGCTTCATGCAAATCCTTTCCCT  600

seq1  GTTACTGCAACGCACAGTTTATTCATGGAGCCAAATGGGTTAAAACTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTGCAACGCACAGTTTATTCATGGAGCCAAATGGGTTAAAACTCTG  650

seq1  TTGTGCTACTACCCTTTAACGTAAGAATACAGAAACTTTAATCAAGAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTACTACCCTTTAACGTAAGAATACAGAAACTTTAATCAAGAGGA  700

seq1  AAGCAAGGCCATTGCCCTGGGAAACAACAGACTGGGATCAGGGCCCTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGGCCATTGCCCTGGGAAACAACAGACTGGGATCAGGGCCCTGTG  750

seq1  AACAATATACCTCCTGTCAGAAAAATGTGCCAGAAA-GGCTGAAAATCCA  799
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AACAATATACCTCCTGTCAGAAAAATGTGCCAGAAAGGGCTGAAAATCCA  800

seq1  GCTGTTCTAGAATCAGTATGTCTTCCCA-GGGAGGGAAACAC-TCAACAC  847
      ||||||||||||||| |||||||||||| ||||||||||||| |||||||
seq2  GCTGTTCTAGAATCA-TATGTCTTCCCAGGGGAGGGAAACACTTCAACAC  849

seq1  ACAATTCAAAGATTAATTAAG-AAAAAAAAAATCTACTCTTCACTTGGT-  895
      ||||||||||||||||||||| ||||||||||||||||||||||| ||| 
seq2  ACAATTCAAAGATTAATTAAGAAAAAAAAAAATCTACTCTTCACTGGGTG  899

seq1  GATTTCTGCCTGGACAGACTGACTGCTAGCTAGTCTGCTCTCCTGAACAC  945
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GATTTCTGCCTGGACAGACTGACTGCTAGCTAGTCTGCTCTCCTGACCAC  949

seq1  ACCATATCCTGAGGCATCCCAGGAGATC-TGTTTGCTTAAGCCTCTGATA  994
      |||||||||||||||||||||||||||| |||||||||||| ||||||||
seq2  ACCATATCCTGAGGCATCCCAGGAGATCTTGTTTGCTTAAG-CTCTGATA  998

seq1  CCACAGCCAAAGACCTCCCAGGAGATCTGCTGCACACAGGACAATT-GAG  1043
      |||||||||||||||| ||||||||||||||||||||||||||||| |||
seq2  CCACAGCCAAAGACCTTCCAGGAGATCTGCTGCACACAGGACAATTGGAG  1048

seq1  CAACTGATCACCAGCTTGTG-TACTCCCCTG-AAGACAACACAATTTGAA  1091
      |||||||| |||| ||||||   |||||||| ||||||||||||||||||
seq2  CAACTGATTACCACCTTGTGACTCTCCCCTGAAAGACAACACAATTTGAA  1098

seq1  GGCATCCCAGGGGT  1105
      |||||| |||||||
seq2  GGCATCTCAGGGGT  1112