BAC Information

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BAC

Clone NameB6Ng01-090O05
Chromosome13 (Build37)
Map Location 65,119,455 - 65,278,946
singlet/doubletdoublet
Overlap gene4932441B19Rik, Gm274, Hiatl1, LOC100042311, Olfr465-ps1, Olfr466, Nlrp4f
Upstream geneHsd17b3, Slc35d2, Zfp367, Habp4, Cdc14b, 1110018J18Rik, Ctsl, Ccrk, LOC665612, 1190003K10Rik, LOC218298, Ppia-ps13_866.1, LOC238678, LOC631470, Cntnap3, EG432767, 4930458L03Rik, LOC218301, LOC628515
Downstream geneENSMUSG00000074847, Zfp369, LOC100042347, LOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777, EG628648, LOC665809, LOC100042404, LOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090O05.bB6Ng01-090O05.g
ACCDH903069DH903070
length588341
definitionDH903069|Mus musculus domesticus DNA, BAC clone: B6Ng01-090O05, 5' end.DH903070|Mus musculus domesticus DNA, BAC clone: B6Ng01-090O05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,278,353 - 65,278,946)(65,119,455 - 65,119,795)
sequence
caggcatttctgctttctgtgaaaaagaaaaatcacttcttgaccatcag
aggcagtgtggaagcagacggagaaaagaagggtggagattctgatgcaa
gaaccatgggcgaactgtccaatgagatatgatttctttataccttattc
agatgtgtttttgcaagacagatgtggttttttgtttgccctacagtttc
agagaggccattcaaagatattcatgctaaaatgactactttatagtgac
ttttttcccatacaagtttcttaacactcaatacaatgttaagtatcttt
aatgctttaggatctcttaacaagagttttgccttttgttggattattta
ttggagttaaagtgtaggtccaggctaatgttacccaaaaagtttttggg
gaaattttatttggctatgcatgagaagccttcagcagaggggtatagac
tggatactcagataatggaaattgctgctgttttgtgttttatattaaag
aatagtagtcatttcccaagtctactgacttctaatctcaaatgttaatg
cacaaatggttgtgtggatatgtgtgtgtggatgtgtg
cagccagagagattaaaggagtaccaaggctgagcaacaccacaactaaa
atcagcttctttttcaataaataacacagacttggtattcacagtgtgat
caaatatcctgcaacaatcacttaggtgatagactagcatttattatact
atttaactcctcccacagaggcaaatagtctcacgacccttttctaaaca
taaactaacaggcttatattgttacatgggaaatgggaggagtcatgagc
ctcttggccagatcatcagatcatcagatgtatcaatagtagggtcacgg
tgcagaggatatatatgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_65278353_65278946
seq2: B6Ng01-090O05.b_49_642 (reverse)

seq1  CACACATCCACACACACATATCCACACAACCATTTGTGCATTAACATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATCCACACACACATATCCACACAACCATTTGTGCATTAACATTTG  50

seq1  AGATTAGAAGTCAGTAGACTTGGGAAATGACTACTATTCTTTAATATAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAGAAGTCAGTAGACTTGGGAAATGACTACTATTCTTTAATATAAA  100

seq1  ACACAAAACAGCAGCAATTTCCATTATCTGAGTATCCAGTCTATACCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAACAGCAGCAATTTCCATTATCTGAGTATCCAGTCTATACCCCT  150

seq1  CTGCTGAAGGCTTCTCATGCATAGCCAAATAAAATTTCCCCAAAAACTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGAAGGCTTCTCATGCATAGCCAAATAAAATTTCCCCAAAAACTTT  200

seq1  TTGGGTAACATTAGCCTGGACCTACACTTTAACTCCAATAAATAATCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTAACATTAGCCTGGACCTACACTTTAACTCCAATAAATAATCCAA  250

seq1  CAAAAGGCAAAACTCTTGTTAAGAGATCCTAAAGCATTAAAGATACTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGCAAAACTCTTGTTAAGAGATCCTAAAGCATTAAAGATACTTAA  300

seq1  CATTGTATTGAGTGTTAAGAAACTTGTATGGGAAAAAAGTCACTATAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTATTGAGTGTTAAGAAACTTGTATGGGAAAAAAGTCACTATAAAG  350

seq1  TAGTCATTTTAGCATGAATATCTTTGAATGGCCTCTCTGAAACTGTAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATTTTAGCATGAATATCTTTGAATGGCCTCTCTGAAACTGTAGGG  400

seq1  CAAACAAAAAACCACATCTGTCTTGCAAAAACACATCTGAATAAGGTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAAAAACCACATCTGTCTTGCAAAAACACATCTGAATAAGGTATA  450

seq1  AAGAAATCATATCTCATTGGACAGTTCGCCCATGGTTCTTGCATCAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATCATATCTCATTGGACAGTTCGCCCATGGTTCTTGCATCAGAAT  500

seq1  CTCCACCCTTCTTTTCTCCGTCTGCTTCCACACTGCCTCTGATGGTCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACCCTTCTTTTCTCCGTCTGCTTCCACACTGCCTCTGATGGTCAAG  550

seq1  AAGTGATTTTTCTTTTTCACAGAAAGCAGAAATGCCTGGAATTC  594
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATTTTTCTTTTTCACAGAAAGCAGAAATGCCTGGAATTC  594

seq1: chr13_65119455_65119795
seq2: B6Ng01-090O05.g_72_412

seq1  CAGCCAGAGAGATTAAAGGAGTACCAAGGCTGAGCAACACCACAACTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGAGAGATTAAAGGAGTACCAAGGCTGAGCAACACCACAACTAAA  50

seq1  ATCAGCTTCTTTTTCAATAAATAACACAGACTTGGTATTCACAGTGTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTTCTTTTTCAATAAATAACACAGACTTGGTATTCACAGTGTGAT  100

seq1  CAAATATCCTGCAACAATCACTTAGGTGATAGACTAGCATTTATTATACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATCCTGCAACAATCACTTAGGTGATAGACTAGCATTTATTATACT  150

seq1  ATTTAACTCCTCCCACAGAGGCAAATAGTCTCACGACCCTTTTCTAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAACTCCTCCCACAGAGGCAAATAGTCTCACGACCCTTTTCTAAACA  200

seq1  TAAACTAACAGGCTTATATTGTTACATGGGAAATGGGAGGAGTCATGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTAACAGGCTTATATTGTTACATGGGAAATGGGAGGAGTCATGAGC  250

seq1  CTCTTGGCCAGATCATCAGATCATCAGATGTATCAATAGTAGGGTCACGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGGCCAGATCATCAGATCATCAGATGTATCAATAGTAGGGTCACGG  300

seq1  TGCAGAGGATATATATGTGTGTGTGTGTGTGTGTGTGTGTG  341
      |||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGGATATATATGTGTGTGTGTGTGTGTGTGTGTGTG  341