BAC Information

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BAC

Clone NameB6Ng01-091A20
Chromosome13 (Build37)
Map Location 66,723,031 - 66,847,297
singlet/doubletdoublet
Overlap geneMzf6d, Vmn2r-ps106, LOC666027
Upstream geneLOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik
Downstream geneLOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091A20.bB6Ng01-091A20.g
ACCDH903189DH903190
length1,1061,126
definitionDH903189|Mus musculus domesticus DNA, BAC clone: B6Ng01-091A20, 5' end.DH903190|Mus musculus domesticus DNA, BAC clone: B6Ng01-091A20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,846,185 - 66,847,297)(66,723,031 - 66,723,888)
sequence
gaattccaggttcttggataacccacttgccactttcgttgtggcaggaa
agaagatgttgatactatgaaaaagaggactaggaaggcagatgagagaa
aagagagaagctaattttacatagcacagcaaattctttgccctaactct
gagtctaaccctaaccctgatatttcttctttatgtaatagagatcctag
agattcaatgggatataagaataatagtggccacctcaagcctacccctg
agcctaaccctgatttatcctaaacctttaaccctatcttaaacctcaca
ccttaatttcctaaccaccctaaccctaatcctaaccacccttatcctaa
tcctaaccataaccctctgatcgcctaatcctaactccagtcctgcttac
tgtgggggatatctcttaataatatataatatttcttaattatacctttg
aattgagaaactcttgcttaatctcgatcttttgagatgttcagatccac
ctttaatctaggcaatagattcttttggcatcccgcatatatgaaagaca
ttgaacagggtagttctttcactttttttatacgtgccattcttttttat
aaaacaaaggtgatttgcttgtgtgatttttctaactagcattaaaaagt
acttatttctttagaattctggtacatcagctataataacccgcagcagg
aaatcaaccagtccttgatttttctaatttctgttggctgagagccttta
ttgggacattctattaaatttcctttctatctacatagagagattcattc
tatatttgagatatgtttatctagagaacctgtactaatccaactgtggt
ttttctctatttcgccactgatgaagatgtgctgtctattaagagggcac
aacagtgtttcccttatgtttctggcttttctcccagggttatttaatgc
ctatcatggtgaaagggtgctgtggtttctctgagctcagcatgaagtaa
caaatcaaactctcgtttcctaaaaatccctcttatgtaatgcctagcat
tcttttcactcagtggtcagaattgatacctacactgcacagagtaatgg
gctatg
gaattcatcacattcattacatttataaggtttctctcctgtatgaatta
cctgatgaatactaagactgtgtttgtgggtaaagcgtttgtcacattca
ctaaacttttaaggcttctctcctgtatgaattctctgatgatttctaag
actgcatttgttactaaagcatttgtcacattccctacatttattaggtt
tctctcctgtatgaattctctgatgaattataagatcatatttgtgagtg
aagcatttgtcacattcactacattgataagggttttcccctgtatgaat
tctctgatgaacattaagattatatttttgggtaaagcatttgtcacatt
cactacatttgtaaggtttttctcctgtataaactctgatgaatactttt
gggtaaagctttttttcacattcactacatttgtaaggtttctttcctgt
atgaattatttgatgactactaacattacatttttgggtaaagcatttgt
tacattcactacatttgtaaggcttctttcctgtatgaattatctgatga
cttctaggactgtgtttgtcagtacagcatttgtcacactcactacattt
ataaggtttctctccagtatgaattctctgatgaatactaagactgtatt
tgtgcaaaaagcatttgtcacattcactatatatgtaaggtttctctcct
gtatggattctctgatgtctaagcttgcatttcttggtgaaacatctggc
acgttcactacatctgtaaggtttctttccactattggtttgtttcagcc
tgagtatttgcttagagttaaaaaccttatcaagcactataccattgtgt
tctttctttcctatgtggattccttgatgtagaccagtgatagaacacaa
atttaaacagtttatacagttttatgtttgcaggtctctggtgtttccat
tttcatgtctgtttatgtttgatgactcaacacgtgtattcctgaagtta
gcttgtaaaatacactttgggtgtattcataatgattttgccatgctttg
acttttaagactcttctggatattccaatgctgggagtgtctgactttag
tcatatatgcatcatttgtcttaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_66846185_66847297
seq2: B6Ng01-091A20.b_44_1149 (reverse)

seq1  CATAGCCCATTACTCCTGTGCAGTGTAGGTATCAA-TCTGACCCACTGAG  49
      |||||||||||||| |||||||||||||||||||| ||||| ||||||||
seq2  CATAGCCCATTACT-CTGTGCAGTGTAGGTATCAATTCTGA-CCACTGAG  48

seq1  TG-GAAGAATGCCTAGGCAATTAACATTAAAGAGGGATTTTTAGGAAACG  98
      ||  ||||||| |||||||  | ||||  |||||||||||||||||||||
seq2  TGAAAAGAATG-CTAGGCA--TTACAT--AAGAGGGATTTTTAGGAAACG  93

seq1  AGAGTTTTGATTTGTGGCTTCATGCTGGGCTCAGGGAAACCACAGCACCC  148
      |||| ||||||||||  |||||||||| |||||| |||||||||||||||
seq2  AGAG-TTTGATTTGTTACTTCATGCTGAGCTCAGAGAAACCACAGCACCC  142

seq1  TTTCACCAATGATAGGCATTAAATAACCCTGGGAGAAAAGCCAGAAACAT  198
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACC-ATGATAGGCATTAAATAACCCTGGGAGAAAAGCCAGAAACAT  191

seq1  AAGGGAAACACTGTTGTGCCCTCTTAATAGACAGCACATCTTCATCAGTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAACACTGTTGTGCCCTCTTAATAGACAGCACATCTTCATCAGTG  241

seq1  GCGAAATAGAGAAAAACCACAGTTGGATTAGTACAGGTTCTCTAGATAAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAAATAGAGAAAAACCACAGTTGGATTAGTACAGGTTCTCTAGATAAA  291

seq1  CATATCTCAAATATAGAATGAATCTCTCTATGTAGATAGAAAGGAAATTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTCAAATATAGAATGAATCTCTCTATGTAGATAGAAAGGAAATTT  341

seq1  AATAGAATGTCCCAATAAAGGCTCTCAGCCAACAGAAATTAGAAAAATCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAATGTCCCAATAAAGGCTCTCAGCCAACAGAAATTAGAAAAATCA  391

seq1  AGGACTGGTTGATTTCCTGCTGCGGGTTATTATAGCTGATGTACCAGAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGGTTGATTTCCTGCTGCGGGTTATTATAGCTGATGTACCAGAAT  441

seq1  TCTAAAGAAATAAGTACTTTTTAATGCTAGTTAGAAAAATCACACAAGCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGAAATAAGTACTTTTTAATGCTAGTTAGAAAAATCACACAAGCA  491

seq1  AATCACCTTTGTTTTATAAAAAAGAATGGCACGTATAAAAAAAGTGAAAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACCTTTGTTTTATAAAAAAGAATGGCACGTATAAAAAAAGTGAAAG  541

seq1  AACTACCCTGTTCAATGTCTTTCATATATGCGGGATGCCAAAAGAATCTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACCCTGTTCAATGTCTTTCATATATGCGGGATGCCAAAAGAATCTA  591

seq1  TTGCCTAGATTAAAGGTGGATCTGAACATCTCAAAAGATCGAGATTAAGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTAGATTAAAGGTGGATCTGAACATCTCAAAAGATCGAGATTAAGC  641

seq1  AAGAGTTTCTCAATTCAAAGGTATAATTAAGAAATATTATATATTATTAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTTCTCAATTCAAAGGTATAATTAAGAAATATTATATATTATTAA  691

seq1  GAGATATCCCCCACAGTAAGCAGGACTGGAGTTAGGATTAGGCGATCAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATATCCCCCACAGTAAGCAGGACTGGAGTTAGGATTAGGCGATCAGA  741

seq1  GGGTTATGGTTAGGATTAGGATAAGGGTGGTTAGGATTAGGGTTAGGGTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTATGGTTAGGATTAGGATAAGGGTGGTTAGGATTAGGGTTAGGGTG  791

seq1  GTTAGGAAATTAAGGTGTGAGGTTTAAGATAGGGTTAAAGGTTTAGGATA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGAAATTAAGGTGTGAGGTTTAAGATAGGGTTAAAGGTTTAGGATA  841

seq1  AATCAGGGTTAGGCTCAGGGGTAGGCTTGAGGTGGCCACTATTATTCTTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGGGTTAGGCTCAGGGGTAGGCTTGAGGTGGCCACTATTATTCTTA  891

seq1  TATCCCATTGAATCTCTAGGATCTCTATTACATAAAGAAGAAATATCAGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCATTGAATCTCTAGGATCTCTATTACATAAAGAAGAAATATCAGG  941

seq1  GTTAGGGTTAGACTCAGAGTTAGGGCAAAGAATTTGCTGTGCTATGTAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGGTTAGACTCAGAGTTAGGGCAAAGAATTTGCTGTGCTATGTAAA  991

seq1  ATTAGCTTCTCTCTTTTCTCTCATCTGCCTTCCTAGTCCTCTTTTTCATA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCTTCTCTCTTTTCTCTCATCTGCCTTCCTAGTCCTCTTTTTCATA  1041

seq1  GTATCAACATCTTCTTTCCTGCCACAACGAAAGTGGCAAGTGGGTTATCC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAACATCTTCTTTCCTGCCACAACGAAAGTGGCAAGTGGGTTATCC  1091

seq1  AAGAACCTGGAATTC  1113
      |||||||||||||||
seq2  AAGAACCTGGAATTC  1106

seq1: chr13_66723031_66723888
seq2: B6Ng01-091A20.g_344_1189

seq1  GGGTTTTCCCCTGTATGAATTCTCTGATGAACATTAAGATTATATTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTCCCCTGTATGAATTCTCTGATGAACATTAAGATTATATTTTTG  50

seq1  GGTAAAGCATTTGTCACATTCACTACATTTGTAAGGTTTTTCTCCTGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGCATTTGTCACATTCACTACATTTGTAAGGTTTTTCTCCTGTAT  100

seq1  AAACTCTGATGAATACTTTTGGGTAAAGCTTTTTTTCACATTCACTACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTGATGAATACTTTTGGGTAAAGCTTTTTTTCACATTCACTACAT  150

seq1  TTGTAAGGTTTCTTTCCTGTATGAATTATTTGATGACTACTAACATTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAGGTTTCTTTCCTGTATGAATTATTTGATGACTACTAACATTACA  200

seq1  TTTTTGGGTAAAGCATTTGTTACATTCACTACATTTGTAAGGCTTCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGGTAAAGCATTTGTTACATTCACTACATTTGTAAGGCTTCTTTC  250

seq1  CTGTATGAATTATCTGATGACTTCTAGGACTGTGTTTGTCAGTACAGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGAATTATCTGATGACTTCTAGGACTGTGTTTGTCAGTACAGCAT  300

seq1  TTGTCACACTCACTACATTTATAAGGTTTCTCTCCAGTATGAATTCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACACTCACTACATTTATAAGGTTTCTCTCCAGTATGAATTCTCTG  350

seq1  ATGAATACTAAGACTGTATTTGTGCAAAAAGCATTTGTCACATTCACTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATACTAAGACTGTATTTGTGCAAAAAGCATTTGTCACATTCACTAT  400

seq1  ATATGTAAGGTTTCTCTCCTGTATGGATTCTCTGATGTCTAAGCTTGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAAGGTTTCTCTCCTGTATGGATTCTCTGATGTCTAAGCTTGCAT  450

seq1  TTCTTGGTGAAACATCTGGCACGTTCACTACATCTGTAAGGTTTCTTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGTGAAACATCTGGCACGTTCACTACATCTGTAAGGTTTCTTTCC  500

seq1  ACTATTGGTTTGTTTCAGCCTGAGTATTTGCTTAGAGTTAAAAACCTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTGGTTTGTTTCAGCCTGAGTATTTGCTTAGAGTTAAAAACCTTAT  550

seq1  CAAGCACTATACCATTGTGTTCTTTCTTTCCTATGTGGATTCCTTGATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCACTATACCATTGTGTTCTTTCTTTCCTATGTGGATTCCTTGATGT  600

seq1  AGACCAGTGATAGAACACAAATTTAAACAGTTTATACAGTTTTTATGTTT  650
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGACCAGTGATAGAACACAAATTTAAACAGTTTATACAG-TTTTATGTTT  649

seq1  GCAAGGTCCTCTGGTGTTTCCATTTTCATGTCTGTTTATGTTTGATGACT  700
      || |||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GC-AGGT-CTCTGGTGTTTCCATTTTCATGTCTGTTTATGTTTGATGACT  697

seq1  CAACACGTGTATTCCTGAAGTTAGCTTGGTAAAATACACTTTGGGTGTAT  750
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CAACACGTGTATTCCTGAAGTTAGCTT-GTAAAATACACTTTGGGTGTAT  746

seq1  TCATAAATGATTTTGCCATGCTTTGACCTTTGTAAGACTTCTCCTGGATA  800
      |||| ||||||||||||||||||||||  || |||||| ||| |||||||
seq2  TCAT-AATGATTTTGCCATGCTTTGAC--TTTTAAGAC-TCTTCTGGATA  792

seq1  TTCACATGCTGGGATGTG-CTGGAACTTTTAGTCAT-TATGCATTCATTT  848
      |||  ||||||||| ||| |||  || ||||||||| |||||| ||||||
seq2  TTCCAATGCTGGGA-GTGTCTG--AC-TTTAGTCATATATGCA-TCATTT  837

seq1  GTCTTTAAAG  858
      ||| ||||||
seq2  GTC-TTAAAG  846