BAC Information

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BAC

Clone NameB6Ng01-091F02
Chromosome13 (Build37)X (Build37)
Map Location 112,202,773 - 112,203,07096,433,276 - 96,433,364
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040614, LOC668159, 4732495G21Rik, LOC100040640, EG621953
Downstream geneGpbp1, LOC100040666, Mier3, Map3k1, LOC668181, LOC100040716, LOC100041161, LOC100041175, Ankrd55
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091F02.bB6Ng01-091F02.g
ACCDH903374DH903375
length297224
definitionDH903374|Mus musculus domesticus DNA, BAC clone: B6Ng01-091F02, 5' end.DH903375|Mus musculus domesticus DNA, BAC clone: B6Ng01-091F02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(112,202,773 - 112,203,070)(96,433,276 - 96,433,364)
sequence
ctatttgaaagttttgtgtgtgtgtgcatgtgtgtatatatatatatgtg
tatatatatatatatatatatatatatatgtatatgtatatatatgtaca
catatatacacacattcttacatttgtgcgtggacttggggtgtatgggt
atatatatttttagactgccttaccaaggtggacattcattgaagtgggg
cggctaaggatctagtgggaaagaaaggtgtcattcaccaagactctttg
gtaccttttttttcccccagagagtgggatggagtggagtgggggga
gaattctccaaaatgaaggcagatgttgtgaggcctgactgtaagtcagc
acttaataggctgaggccagaggagcagcagtgggattctgactctgtga
tacaaaaccaaaaccagacaacggcaagaaagccagtaaagctactctgc
aaaattcaggctccatgcgaggtgtggtggtggcacacaccttttatccc
agcacttaggaggcagaggcaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_112202773_112203070
seq2: B6Ng01-091F02.b_52_348

seq1  CTATTTGAAAGTTTTGTGTGTGTGTGCATGTGTGTATATATATATATGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTGAAAGTTTTGTGTGTGTGTGCATGTGTGTATATATATATATGTG  50

seq1  TATATATATATATATATATATATATATATGTATATGTATATATATGTATA  100
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TATATATATATATATATATATATATATATGTATATGTATATATATGTACA  100

seq1  TATATATTAAAGAATTATTACATTTGTTAAAGGACTTGTCATATATGGCA  150
       ||||||  |   ||| ||||||||||    |||||||   | |||||  
seq2  CATATATACACACATTCTTACATTTGTGCGTGGACTTGGGGTGTATGGGT  150

seq1  GGATTTATTTTTAAAACTGCCTTACAGAGGTGGACATTCATTGAAGTGGG  200
        || ||||||| | ||||||||||  |||||||||||||||||||||||
seq2  ATATATATTTTT-AGACTGCCTTACCAAGGTGGACATTCATTGAAGTGGG  199

seq1  GCGGCTAAGGATCTAGTGGGAAAGAAAGGTGTCATTCACCAAGACTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCTAAGGATCTAGTGGGAAAGAAAGGTGTCATTCACCAAGACTCTTT  249

seq1  GGTACCTTTTTTTTCCCCCAGAGAGTGGGATGGAGTGGAGTGGGGGGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCTTTTTTTTCCCCCAGAGAGTGGGATGGAGTGGAGTGGGGGGA  297

seq1: chrX_96433276_96433364
seq2: B6Ng01-091F02.g_163_289

seq1  TGATACAAAACCAAAAC------------TGAAA---ATGAAA-------  28
      |||||||||||||||||             ||||   |  |||       
seq2  TGATACAAAACCAAAACCAGACAACGGCAAGAAAGCCAGTAAAGCTACTC  50

seq1  --CAATAGCCAGGC--------------GGTGGTGGCGCACACCTTTAAT  62
        ||| |  |||||              ||||||||| ||||||||| ||
seq2  TGCAAAATTCAGGCTCCATGCGAGGTGTGGTGGTGGCACACACCTTTTAT  100

seq1  CCCAGCACTTGGGAGGCAGAGGCAGGC  89
      |||||||||| ||||||||||||||||
seq2  CCCAGCACTTAGGAGGCAGAGGCAGGC  127