BAC Information

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BAC

Clone NameB6Ng01-092O01
Chromosome13 (Build37)
Map Location 75,337,699 - 75,494,164
singlet/doubletdoublet
Overlap genenone
Upstream geneExoc3, Ahrr, Pdcd6, Sdha, Ccdc127, AI595366, Zfp72, LOC666670, LOC634386, LOC100042547, LOC666683, LOC547136, BC012278, LOC434490, Arts1, Cast, LOC622204, EG544954, Pcsk1
Downstream geneLOC672443, LOC666764, LOC100042606, LOC100042986, Ell2, LOC666786, Glrx, Rhobtb3, LOC666553, LOC622313, Spata9, Rfesd, LOC100043008, Gpr150, Arsk, AK129128, Gm276
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092O01.bB6Ng01-092O01.g
ACCDH904515DH904516
length9011,071
definitionDH904515|Mus musculus domesticus DNA, BAC clone: B6Ng01-092O01, 5' end.DH904516|Mus musculus domesticus DNA, BAC clone: B6Ng01-092O01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,337,699 - 75,338,221)(75,493,083 - 75,494,164)
sequence
gaattctccctagaacacatcattcttttttttattagatattttcttta
tatacatttcaaattatccctataccctccctctgccctgctcccctacc
cacccactcccaattcttggccctggaattcccttgtattggagcatata
aagtttgcaataccaaggggcctctcttcctagtaggccatcacctgcta
catatgcagctagagaggcgagctctgggagtactggttagttcatattg
ttgttccacctatagggttgctccttgggtactttctctagcttctccat
tgggggccctgtgtttcatcctatagatgactgtgagcatccacttctgt
atttgccaggcactagcatagcctcatacgagacagctataacagggtcc
tgtcagcaaaatctttctggcattgtgcaatagtgtctgggtttggtggc
tgattatgggatggatccgcaggtggggtagtctctggatagtccatcct
ttcgtcttagctccaaactttgtctctgtaactcctttcatgggtatttt
gttccctattctaaggaggaatgaagtatctacccattggtcttccctct
tcttgattttcttgtgttttgcaaattgtatcttgggtgttctatgtttc
tgggctgatatccacttatcagtgagtgcatatctagtgacttcttttgt
gattgggttacctcactaaggatgacatcctccaggtacatccatttgtc
caagaatttcataaatccattgtttttaatagctgagtagtactccattg
tgtaaatgtaccacatttttctgtatccattcttctgttgtgggatatct
gggtcctttccagcttctgggctattgtaaatcaggctgctatgaacata
g
gaattcacaaaggcacaggctttacatgtgatcaaccatacttaggattt
ttatttcttcttttttaactttgatcataggtagcttaagccttcctaag
gaccattccatttaaaatattattggatggctttcttccacatagtcttt
ctcctatcactcaaaagtgtctatcagatggcagaccatgctgactctat
ttgtgtttaggtaagggaattcagtatggtgatcatataagatgtatttt
cctctaccttccctccaaaatccctcttgcaaatgtgaggtggagatgga
gtttaatttctacaaatgaatcacctcatgtaggactgcaaaacttctcc
ctcttttagttatccttgcttgctaatcaaggttctctataatgattgct
tcctgacaaagcaaaattgacaaccttattagtgttcatctatgaacaca
tccctgttatgccttttcaccaggagacctgcacaagttattcctgcaaa
ggtaaaatggagaattacaagagacacttggccaggcaacttaccacttg
ctttgaagggccattaaaccactatacattcccaataatatattgtaata
agaaaggaagattaagagataaagttcaccagaggtaaaggacagaagag
agccagaagtgtaccttcctttctttggggagaggaaaggtaattgcggg
agagggacacactatttgctttgtgtctatatcaggcattccataagcat
gctacacatgttttcttactagatcttcagaataattctataagacaact
atctgccagttttattgattataaatttcacctagcagatttgatgacaa
cttttataaagatgtatggtgagtacatggctttgccaaactcacttcaa
agttgttagcatagtgtctccaaaattcctgaaaggcccatcctctccca
agtatggcattgtagagaatgtataaaaagtcaacggaattttttttaga
caggggatctcaactgaccctgttatgctaagcaacatctgtccatcact
tcttttgtgctctgttagagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_75337699_75338221
seq2: B6Ng01-092O01.b_44_566

seq1  GAATTCTCCCTAGAACACATCATTCTTTTTTTTATTAGATATTTTCTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCTAGAACACATCATTCTTTTTTTTATTAGATATTTTCTTTA  50

seq1  TATACATTTCAAATTATCCCTATACCCTCCCTCTGCCCTGCTCCCCTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATTTCAAATTATCCCTATACCCTCCCTCTGCCCTGCTCCCCTACC  100

seq1  CACCCACTCCCAATTCTTGGCCCTGGAATTCCCTTGTATTGGAGCATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACTCCCAATTCTTGGCCCTGGAATTCCCTTGTATTGGAGCATATA  150

seq1  AAGTTTGCAATACCAAGGGGCCTCTCTTCCTAGTAGGCCATCACCTGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGCAATACCAAGGGGCCTCTCTTCCTAGTAGGCCATCACCTGCTA  200

seq1  CATATGCAGCTAGAGAGGCGAGCTCTGGGAGTACTGGTTAGTTCATATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGCAGCTAGAGAGGCGAGCTCTGGGAGTACTGGTTAGTTCATATTG  250

seq1  TTGTTCCACCTATAGGGTTGCTCCTTGGGTACTTTCTCTAGCTTCTCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCACCTATAGGGTTGCTCCTTGGGTACTTTCTCTAGCTTCTCCAT  300

seq1  TGGGGGCCCTGTGTTTCATCCTATAGATGACTGTGAGCATCCACTTCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGCCCTGTGTTTCATCCTATAGATGACTGTGAGCATCCACTTCTGT  350

seq1  ATTTGCCAGGCACTAGCATAGCCTCATACGAGACAGCTATAACAGGGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCAGGCACTAGCATAGCCTCATACGAGACAGCTATAACAGGGTCC  400

seq1  TGTCAGCAAAATCTTTCTGGCATTGTGCAATAGTGTCTGGGTTTGGTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCAAAATCTTTCTGGCATTGTGCAATAGTGTCTGGGTTTGGTGGC  450

seq1  TGATTATGGGATGGATCCGCAGGTGGGGTAGTCTCTGGATAGTCCATCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATGGGATGGATCCGCAGGTGGGGTAGTCTCTGGATAGTCCATCCT  500

seq1  TTCGTCTTAGCTCCAAACTTTGT  523
      |||||||||||||||||||||||
seq2  TTCGTCTTAGCTCCAAACTTTGT  523

seq1: chr13_75493083_75494164
seq2: B6Ng01-092O01.g_69_1139 (reverse)

seq1  GCTCTAACAGCAGCAACAAAAGGAAGTGATGGACGGATGGTTGCTTAGCA  50
      |||||||||| ||| |||||| |||||||||||| ||| |||||||||||
seq2  GCTCTAACAG-AGC-ACAAAA-GAAGTGATGGACAGAT-GTTGCTTAGCA  46

seq1  TACACAGGGTCAGTTGGAGATCCCCTGGTCTTAAAAAAAAATTCCGTTGA  100
      || |||||||||||| |||||||||| ||||  |||||||||||||||||
seq2  TA-ACAGGGTCAGTT-GAGATCCCCT-GTCT--AAAAAAAATTCCGTTGA  91

seq1  ACTTTTATACATTCTCTAACATTGCCATACTTGGGGAGAGGATGGGCCTT  150
        ||||||||||||||| ||| |||||||||| |||||||||||||||||
seq2  CTTTTTATACATTCTCT-ACAATGCCATACTT-GGGAGAGGATGGGCCTT  139

seq1  TCAGGAATTTTGGAGACACTATGCTAACAACTTTGAAGTGAGTTTGGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAATTTTGGAGACACTATGCTAACAACTTTGAAGTGAGTTTGGCAA  189

seq1  AGCCATGTACTCACCATACATCTTTATAAAAGTTGTCATCAACTCTGCTA  250
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGCCATGTACTCACCATACATCTTTATAAAAGTTGTCATCAAATCTGCTA  239

seq1  GGTTGAATTTTATAATCAATAAAACTGGCAGATAGTTGTCTTATAGAATT  300
      || |||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GG-TGAAATTTATAATCAATAAAACTGGCAGATAGTTGTCTTATAGAATT  288

seq1  ATTCTGAAGATCTAGTAAG-AAACATGTGTAGCATGCTTATGGAATGCCT  349
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATTCTGAAGATCTAGTAAGAAAACATGTGTAGCATGCTTATGGAATGCCT  338

seq1  GATATAGACACAAAGCAAATAGTGTGTCCCTCTCCCGCAATTACCTTTCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGACACAAAGCAAATAGTGTGTCCCTCTCCCGCAATTACCTTTCC  388

seq1  TCTCCCCAAAGAAAGGAAGGTACACTTCTGGCTCTCTTCTGTCCTTTACC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCAAAGAAAGGAAGGTACACTTCTGGCTCTCTTCTGTCCTTTACC  438

seq1  TCTGGTGAACTTTATCTCTTAATCTTCCTTTCTTATTACAATATATTATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTGAACTTTATCTCTTAATCTTCCTTTCTTATTACAATATATTATT  488

seq1  GGGAATGTATAGTGGTTTAATGGCCCTTCAAAGCAAGTGGTAAGTTGCCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATGTATAGTGGTTTAATGGCCCTTCAAAGCAAGTGGTAAGTTGCCT  538

seq1  GGCCAAGTGTCTCTTGTAATTCTCCATTTTACCTTTGCAGGAATAACTTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAGTGTCTCTTGTAATTCTCCATTTTACCTTTGCAGGAATAACTTG  588

seq1  TGCAGGTCTCCTGGTGAAAAGGCATAACAGGGATGTGTTCATAGATGAAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTCTCCTGGTGAAAAGGCATAACAGGGATGTGTTCATAGATGAAC  638

seq1  ACTAATAAGGTTGTCAATTTTGCTTTGTCAGGAAGCAATCATTATAGAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATAAGGTTGTCAATTTTGCTTTGTCAGGAAGCAATCATTATAGAGA  688

seq1  ACCTTGATTAGCAAGCAAGGATAACTAAAAGAGGGAGAAGTTTTGCAGTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGATTAGCAAGCAAGGATAACTAAAAGAGGGAGAAGTTTTGCAGTC  738

seq1  CTACATGAGGTGATTCATTTGTAGAAATTAAACTCCATCTCCACCTCACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATGAGGTGATTCATTTGTAGAAATTAAACTCCATCTCCACCTCACA  788

seq1  TTTGCAAGAGGGATTTTGGAGGGAAGGTAGAGGAAAATACATCTTATATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAAGAGGGATTTTGGAGGGAAGGTAGAGGAAAATACATCTTATATG  838

seq1  ATCACCATACTGAATTCCCTTACCTAAACACAAATAGAGTCAGCATGGTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCATACTGAATTCCCTTACCTAAACACAAATAGAGTCAGCATGGTC  888

seq1  TGCCATCTGATAGACACTTTTGAGTGATAGGAGAAAGACTATGTGGAAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCTGATAGACACTTTTGAGTGATAGGAGAAAGACTATGTGGAAGA  938

seq1  AAGCCATCCAATAATATTTTAAATGGAATGGTCCTTAGGAAGGCTTAAGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATCCAATAATATTTTAAATGGAATGGTCCTTAGGAAGGCTTAAGC  988

seq1  TACCTATGATCAAAGTTAAAAAAGAAGAAATAAAAATCCTAAGTATGGTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTATGATCAAAGTTAAAAAAGAAGAAATAAAAATCCTAAGTATGGTT  1038

seq1  GATCACATGTAAAGCCTGTGCCTTTGTGAATTC  1082
      |||||||||||||||||||||||||||||||||
seq2  GATCACATGTAAAGCCTGTGCCTTTGTGAATTC  1071