BAC Information

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BAC

Clone NameB6Ng01-093O12
Chromosome13 (Build37)
Map Location 4,803,575 - 4,804,708
singlet/doubletsinglet
Overlap geneEG432723
Upstream geneCalm4, Calm5, LOC100039279, Net1, Tubal3, Ucn3, Akr1c14, Akr1c18, LOC100039262, Akr1c13, Akr1c19, Akr1c12, Akr1c6, Akr1c20, Akr1c21, Akr1e1, EG432721
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093O12.bB6Ng01-093O12.g
ACCDH905265DH905266
length1,1241,089
definitionDH905265|Mus musculus domesticus DNA, BAC clone: B6Ng01-093O12, 5' end.DH905266|Mus musculus domesticus DNA, BAC clone: B6Ng01-093O12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttcacaaaaaaaaaaagttactggtttaagagctgagaataa
tcacattctacactgtacattgagttagtatccagaaattaagtaatttc
tttcaagaatcaccatgtgtcacatagaggatgaagagggataaagcaca
gagttcacagtcctgtcaagattacaaggttacatttgagagaacttttt
taaggaaaataagctattgccaaaaatcagtctattactttaaaataaat
agttcaaagtgaacttgagaagggttttggttgtttttctattctttgtt
agaaattttatatcaaattttaacattatgtctagtagatccaactaatg
ctctaagacaaatctataaatattaccaaaataattttttataatgctgg
gaactggaattgaagtcaaggctttgaaaaagctagcaagtgatgcattg
ctgagctatcgtctcagctaaacaaattttattattctagtgtacaatga
gaataatttatccaaataattaaattatatactttaattatagtttgtat
ttatttattgcacttatggaaatcaaaggacaattgatagaagtcaatta
catctaccatgtggtaccagggtataaaattcaggtcatcaggcttaatg
caagtgactttcatttacctgcccaaatgtaatatttgacagaaagaaaa
aggatagtattattcaacctttaaatattatagaatctttgcctggggct
cagcatttgcctaggatatgggaggtcatgggcttggttatcaaaatcac
acacaaaaaagtgcttaaagactctcaccgcagttgcctcgaagtcagtc
ttcaactagcagccttggatgaagacatagaactctcagctctgcctgtg
ccatgcctgcctttttactgccatgctcccaccttgatgataatggactg
aacctctgaacctgtaagccagtcccaattaaatgttttttataagattt
gccttggtcatggtgtctgttcacagcagtaaaaccctactaagacacaa
gtggtatcaggactggggtgtgctgtgatagcctgacatgctttattgaa
aatgtgtatttttggactttggat
gaattcaataccccaaccacagtgattcctggatactccaacaaactggg
aaagcaagattcagatttaaaaatcatatctcaagatgctggtagaagat
tttaagacagacattaataactcccttaaagaaacacagaacacagctaa
gcaggtagaagcacttaaagaggaaacacaaaattccttaaagaattaca
ggaaaacacaaataaacaggtgaaggaattgaacaaaaccattgaaaagt
ggaagtaggaacaataaagaaatcacaaagggagacaactctggagatag
aaaacctaggaaaaaaaatcaggagcaacagatgcaagcatcaccaacag
aatacaagggatagaagagagaatttcaggtgcagaagattccatagaaa
acattgatacaaaaatcaaacaaagttgctaaaagatcctaactcaaaac
atccaagaaatccagaacacaatgagaagaacaaacctaatgataatatg
tatagatgagaaggaagatttccaacttaaagggccagtaattataatca
acagaattatagaagaaaactcccacaacctaaagaaagagaagcccatg
aacatacaagaagcctacagaactccaaatagtttggatcaataaagaaa
ttccttctgtcacataatgatcagaaaaaaaaatgcactaaataaagata
gaatattaaaagcaataagggacaaatgtcaagtaacatataaaggcagg
catattagaattacactaaacttttctccaaagactatgaaagccagaag
atcctgaacagatatcatatagatgctaagagaatacaaggcaaaacttt
caattagtatagatggagaagccaaattattccatgacaaaaccaaatct
acccaatatctttcacaaatccagctcttcaaaggaaaataaagggaaaa
ctcttaacacaaggaggaaactacatccagaaaaagcaagaaaaataatc
tttcaacaaacctaaggccacatgaacaaattctacttctaaacaacaaa
aatgaacaggaagcacacaatgtcgcatttgagggtgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_4803575_4804708
seq2: B6Ng01-093O12.b_50_1173 (reverse)

seq1  ATCCAAAGTCCAAAAATACACATTCTTTCAAATAAAAGCATTGTCAGGCC  50
      |||||||||||||||||||||||  ||||||   |||||| ||||||| |
seq2  ATCCAAAGTCCAAAAATACACAT--TTTCAA--TAAAGCA-TGTCAGG-C  44

seq1  TATCACAGCAACACCCCAGTCCCTGATACCAACTTGTGTCTTAGTTAGGG  100
      ||||||||| |||||||||| ||||||||| ||||||||||||| |||||
seq2  TATCACAGC-ACACCCCAGT-CCTGATACC-ACTTGTGTCTTAG-TAGGG  90

seq1  TTTTACTGCTGTGAACAGACACCATGACCAAGGCAAATCTTATAAAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTGCTGTGAACAGACACCATGACCAAGGCAAATCTTATAAAAAAC  140

seq1  ATTTAATTGGGACTGGCTTACAGGTTCAGAGGTTCAGTCCATTATCATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTGGGACTGGCTTACAGGTTCAGAGGTTCAGTCCATTATCATCA  190

seq1  AGGTGGGAGCATGGCAGTAAAAAGGCAGGCATGGCACAGGCAGAGCTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGGAGCATGGCAGTAAAAAGGCAGGCATGGCACAGGCAGAGCTGAG  240

seq1  AGTTCTATGTCTTCATCCAAGGCTGCTAGTTGAAGACTGACTTCGAGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTATGTCTTCATCCAAGGCTGCTAGTTGAAGACTGACTTCGAGGCA  290

seq1  ACTGCGGTGAGAGTCTTTAAGCACTTTTTTGTGTGTGATTTTGATAACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCGGTGAGAGTCTTTAAGCACTTTTTTGTGTGTGATTTTGATAACCA  340

seq1  AGCCCATGACCTCCCATATCCTAGGCAAATGCTGAGCCCCAGGCAAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCATGACCTCCCATATCCTAGGCAAATGCTGAGCCCCAGGCAAAGAT  390

seq1  TCTATAATATTTAAAGGTTGAATAATACTATCCTTTTTCTTTCTGTCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAATATTTAAAGGTTGAATAATACTATCCTTTTTCTTTCTGTCAAA  440

seq1  TATTACATTTGGGCAGGTAAATGAAAGTCACTTGCATTAAGCCTGATGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACATTTGGGCAGGTAAATGAAAGTCACTTGCATTAAGCCTGATGAC  490

seq1  CTGAATTTTATACCCTGGTACCACATGGTAGATGTAATTGACTTCTATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTTTATACCCTGGTACCACATGGTAGATGTAATTGACTTCTATCA  540

seq1  ATTGTCCTTTGATTTCCATAAGTGCAATAAATAAATACAAACTATAATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCCTTTGATTTCCATAAGTGCAATAAATAAATACAAACTATAATTA  590

seq1  AAGTATATAATTTAATTATTTGGATAAATTATTCTCATTGTACACTAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATATAATTTAATTATTTGGATAAATTATTCTCATTGTACACTAGAA  640

seq1  TAATAAAATTTGTTTAGCTGAGACGATAGCTCAGCAATGCATCACTTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAATTTGTTTAGCTGAGACGATAGCTCAGCAATGCATCACTTGCT  690

seq1  AGCTTTTTCAAAGCCTTGACTTCAATTCCAGTTCCCAGCATTATAAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTTCAAAGCCTTGACTTCAATTCCAGTTCCCAGCATTATAAAAAA  740

seq1  TTATTTTGGTAATATTTATAGATTTGTCTTAGAGCATTAGTTGGATCTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGGTAATATTTATAGATTTGTCTTAGAGCATTAGTTGGATCTAC  790

seq1  TAGACATAATGTTAAAATTTGATATAAAATTTCTAACAAAGAATAGAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATAATGTTAAAATTTGATATAAAATTTCTAACAAAGAATAGAAAA  840

seq1  ACAACCAAAACCCTTCTCAAGTTCACTTTGAACTATTTATTTTAAAGTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCAAAACCCTTCTCAAGTTCACTTTGAACTATTTATTTTAAAGTAA  890

seq1  TAGACTGATTTTTGGCAATAGCTTATTTTCCTTAAAAAAGTTCTCTCAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTGATTTTTGGCAATAGCTTATTTTCCTTAAAAAAGTTCTCTCAAA  940

seq1  TGTAACCTTGTAATCTTGACAGGACTGTGAACTCTGTGCTTTATCCCTCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACCTTGTAATCTTGACAGGACTGTGAACTCTGTGCTTTATCCCTCT  990

seq1  TCATCCTCTATGTGACACATGGTGATTCTTGAAAGAAATTACTTAATTTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTCTATGTGACACATGGTGATTCTTGAAAGAAATTACTTAATTTC  1040

seq1  TGGATACTAACTCAATGTACAGTGTAGAATGTGATTATTCTCAGCTCTTA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATACTAACTCAATGTACAGTGTAGAATGTGATTATTCTCAGCTCTTA  1090

seq1  AACCAGTAACTTTTTTTTTTTGTGAACTGAATTC  1134
      ||||||||||||||||||||||||||||||||||
seq2  AACCAGTAACTTTTTTTTTTTGTGAACTGAATTC  1124