BAC Information

Click to search

BAC

Clone NameB6Ng01-094B14
Chromosome13 (Build37)15 (Build37)
Map Location 67,114,073 - 67,115,26772,654,654 - 72,654,957
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1
Downstream geneZfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094B14.bB6Ng01-094B14.g
ACCDH905407DH905408
length1,190965
definitionDH905407|Mus musculus domesticus DNA, BAC clone: B6Ng01-094B14, 5' end.DH905408|Mus musculus domesticus DNA, BAC clone: B6Ng01-094B14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(67,114,073 - 67,115,267)(72,654,654 - 72,654,957)
sequence
gaattcttatgaaggagggttgggattgatagggttgataatcagtgata
ttagcctctttccatccaatatgagtgtaatatgagacaaaaatttaaat
ttaaactttatgccattttgacacaataaataatggaatagaattgattt
taaaagggaagtaagctctgtcccgtgctatagcacagatgacttctgcc
aacatggtgctaaggaaaagaagccagtcacaaaaatacaaataccgtga
ttctttttctctgaggtatctgcttaagcactcaagtcagtagaaagtgg
ggtggtagtggccaggatctggagaaaagcaagtgggaagttattattta
atgagcacagagatacagatttgcaagatgaacttctgtattctctacaa
caatagaacaatattcaacttaataataataatagccaaaatgacaaatc
ttgtattctgtgttgtttcaaccacaatataaagattcagaggaatgagt
gcaattaatctcaacaacaaatttttttaacttaatatgctcagaatgct
ttcattttaatgtgtaatcaacgaatggaaaattgttgataagaaatttt
atgtttcttctcttgtacaaagcctggaatctgtgtgcatcttctagtgc
atatcggccatttcagtcacctgtggccagtagctgcagtattagatggt
gacactggttagtattaacagatgacatttccagagcagaccatggggtt
taaacactgcttagagtcagtccattacacagattgactctttatcttca
caaagggcactttgagataggtgccaggatgctgaacctcagagaaatca
aggaacatacctgaggtcaagaaccaagtggacggctggatccatgcatt
cttaatcaagagcttagccttccctaagatgcctttctgactttttcata
aaagtttctttgattgtctcagagtagcagagccccagctgggcaagctt
taggacattgttgtttgtgtgcagcaagcttactattccctgctttctgg
ggggaggtggtagaaaacacctcaagggagtttctgagcaacgaaaaaac
ctgtggttgggtaaaccgcattactcacatcacacacgagcactacacca
cgcaccacacggggtggggggtggctgttgttctcggttc
gaattctcttgtgttgccaaagtgaagatggagtgcagaaggcatttcca
cacactttacacttgtattgtttctctcttgtatgaattatcttatgttt
taaaagtcttgatggatatttgaaggccttgccacatatttcacagttgt
agggtttctctcttgtatgaattcttttctgctcaggaagtgatgatgga
gaccagaagacctttctacctactttacacttggagggtttttgttctct
atgaattttcttatggttggaaagtattgatggataacggaaggccttgc
cacacacttcacacttatagggtttgtcttctctatgagttcccttgtgt
agaataagtgatgatggagagtggaaggcctttccacatactttacactt
gtatggtgtctctcctgtatgtatattcttatggttggaaagtattgatg
gataatggaaggccttgccacatacttcacacttgtagggttttcctcct
ctgtgagttcccttgtgtacacgaagtgatgatggagagcgaaaggcctt
tccacacactttacacttgtatggtgtctctcctgtatgaatattcttat
ggtctgaaagtactgatgaataacggaaggccttgccacatacttcacac
ttgtagggtttgtcttctctatgaattcccttgtgtacacgaagtgatga
tggagagcggaaagcctttccacatactttacacttgtatggtgtctctc
ctgtatgaatattcttatgttttgaaagtcttgatggatattcaaaggcc
ttgccacatacttcacacttgtagggtttctctcctgcatgcattctctt
gtgttcatgaagtgatgatcgagagcggaggaatttccacatacttcaca
cttgtagggttttgttctgtatgaattatcttgtgttttgaaagtaatga
tggatattggaaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67114073_67115267
seq2: B6Ng01-094B14.b_48_1237

seq1  GAATTCTTATGAAGGAGGGTTGGGATTGATAGGGTTGATAATCAGTGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATGAAGGAGGGTTGGGATTGATAGGGTTGATAATCAGTGATA  50

seq1  TTAGCCTCTTTCCATCCAATATGAGTGTAATATGAGACAAAAATTTAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCTCTTTCCATCCAATATGAGTGTAATATGAGACAAAAATTTAAAT  100

seq1  TTAAACTTTATGCCATTTTGACACAATAAATAATGGAATAGAATTGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTTTATGCCATTTTGACACAATAAATAATGGAATAGAATTGATTT  150

seq1  TAAAAGGGAAGTAAGCTCTGTCCCGTGCTATAGCACAGATGACTTCTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGGAAGTAAGCTCTGTCCCGTGCTATAGCACAGATGACTTCTGCC  200

seq1  AACATGGTGCTAAGGAAAAGAAGCCAGTCACAAAAATACAAATACCGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGTGCTAAGGAAAAGAAGCCAGTCACAAAAATACAAATACCGTGA  250

seq1  TTCTTTTTCTCTGAGGTATCTGCTTAAGCACTCAAGTCAGTAGAAAGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTCTCTGAGGTATCTGCTTAAGCACTCAAGTCAGTAGAAAGTGG  300

seq1  GGTGGTAGTGGCCAGGATCTGGAGAAAAGCAAGTGGGAAGTTATTATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTAGTGGCCAGGATCTGGAGAAAAGCAAGTGGGAAGTTATTATTTA  350

seq1  ATGAGCACAGAGATACAGATTTGCAAGATGAACTTCTGTATTCTCTACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCACAGAGATACAGATTTGCAAGATGAACTTCTGTATTCTCTACAA  400

seq1  CAATAGAACAATATTCAACTTAATAATAATAATAGCCAAAATGACAAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGAACAATATTCAACTTAATAATAATAATAGCCAAAATGACAAATC  450

seq1  TTGTATTCTGTGTTGTTTCAACCACAATATAAAGATTCAGAGGAATGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTCTGTGTTGTTTCAACCACAATATAAAGATTCAGAGGAATGAGT  500

seq1  GCAATTAATCTCAACAACAAATTTTTTTAACTTAATATGCTCAGAATGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTAATCTCAACAACAAATTTTTTTAACTTAATATGCTCAGAATGCT  550

seq1  TTCATTTTAATGTGTAATCAACGAATGGAAAATTGTTGATAAGAAATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTAATGTGTAATCAACGAATGGAAAATTGTTGATAAGAAATTTT  600

seq1  ATGTTTCTTCTCTTGTACAAAGCCTGGAATCTGTGTGCATCTTCTAGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCTTCTCTTGTACAAAGCCTGGAATCTGTGTGCATCTTCTAGTGC  650

seq1  ATATCGGCCATTTCAGTCACCTGTGGCCAGTAGCTGCAGTATTAGATGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCGGCCATTTCAGTCACCTGTGGCCAGTAGCTGCAGTATTAGATGGT  700

seq1  GACACTGGTTAGTATTAACAGATGACATTTCCAGAGCAGACCATGGGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGGTTAGTATTAACAGATGACATTTCCAGAGCAGACCATGGGGTT  750

seq1  TAAACACTGCTTAGAGTCAGTCCATTACACAGATTGACTCTTTATCTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACACTGCTTAGAGTCAGTCCATTACACAGATTGACTCTTTATCTTCA  800

seq1  C-AAGGGCACTTTGAGATAGGTGCCAGGATGCTGAACCTCAGAGAATTCA  849
      | |||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAAAGGGCACTTTGAGATAGGTGCCAGGATGCTGAACCTCAGAGAAATCA  850

seq1  AGGAACATACCTGAGGTCAAGAACCAAGTGGACGGCTGGATCCATGCATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACATACCTGAGGTCAAGAACCAAGTGGACGGCTGGATCCATGCATT  900

seq1  CTTAATCAAGAGCTTAGCCTTCCCTAAGATGCCTTTCTGACTTTTTCATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATCAAGAGCTTAGCCTTCCCTAAGATGCCTTTCTGACTTTTTCATA  950

seq1  AAAGTTTCTTTGATTGTCTCAGAGTAGCAGAGCCCCAGCTGGGCAAGCTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTCTTTGATTGTCTCAGAGTAGCAGAGCCCCAGCTGGGCAAGCTT  1000

seq1  TAGGACATTG-TGTATGTGTGCAGCAAGCTTACTATTCCCTGCTTTCCTG  1048
      |||||||||| ||| ||||||||||||||||||||||||||||||||  |
seq2  TAGGACATTGTTGTTTGTGTGCAGCAAGCTTACTATTCCCTGCTTTCTGG  1050

seq1  TGTGAGGTTGGTAG-AGACA-CTCAAGGGAGTTTCTGAGCAACAGAAAGA  1096
       | |||| |||||| | ||| |||||||||||||||||||||| |||| |
seq2  GGGGAGG-TGGTAGAAAACACCTCAAGGGAGTTTCTGAGCAAC-GAAA-A  1097

seq1  AACTTGT-GTTTGGTAAACACGCATACACACACACACACACACACACACA  1145
      ||| ||| ||| ||||||| |||||  || ||||  |||||||   ||| 
seq2  AACCTGTGGTTGGGTAAAC-CGCAT-TACTCACA-TCACACACGAGCAC-  1143

seq1  CACACACACACACACACACGGGGT-GGGGGTGGCTGTTTTGTTCTCTGTT  1194
       |||| ||| ||| |||||||||| |||||||||||  |||||||| |||
seq2  TACAC-CACGCAC-CACACGGGGTGGGGGGTGGCTG--TTGTTCTCGGTT  1189

seq1  C  1195
      |
seq2  C  1190

seq1: chr15_72654654_72654957
seq2: B6Ng01-094B14.g_644_974 (reverse)

seq1  CTACAAGTGTGAAGTATGTGGCAAGGCCTTCCATTGTCCATCAACACTTT  50
      ||||||||||||||||||||| ||  || |||  | || |||| ||||| 
seq2  CTACAAGTGTGAAGTATGTGGAAATTCC-TCCGCTCTCGATCATCACTTC  49

seq1  CCAACCATAAGAAAATAAATACAGGAGAGAAACCCCGTAAGTGTGAAGTA  100
         | || |||| |||  || ||||||||||||||   ||||||||||||
seq2  ATGAACACAAGAGAATGCATGCAGGAGAGAAACCCTACAAGTGTGAAGTA  99

seq1  TGTAGCAAGGCTTTCCATTGTCCATCAACACTTTCTAAACACAAGAGAAT  150
      ||| ||||||| ||  | | |||||||| |||||| ||||| ||||  ||
seq2  TGTGGCAAGGCCTTTGAATATCCATCAAGACTTTCAAAACATAAGAATAT  149

seq1  TCATACAG---------TATACAAGTGTGATGTGTGTG--ATGTATGTCT  189
      ||||||||          |||||||||| | || ||||  | |  | || 
seq2  TCATACAGGAGAGACACCATACAAGTGTAAAGTATGTGGAAAGGCTTTCC  199

seq1  GCTTTCTAAACATAACACAGTATGTACAGG---------AGAAAAG----  226
      ||| ||  | ||| ||   || |  ||| |         ||| |||    
seq2  GCTCTC-CATCATCACTTCGTGTACACAAGGGAATTCATAGAGAAGACAA  248

seq1  ---TTTTAAATGTGAAGTATATGGCAAGGCCTTTCATTGTCCATTACT--  271
          |  || |||||||||| |||||||||||| | || | ||| | |  
seq2  ACCCTACAAGTGTGAAGTATGTGGCAAGGCCTTCCGTTATTCATCAGTAC  298

seq1  TTTCTAAAGACAAGAGAATTCATACAGGAGAGA  304
      ||||  |  | ||||  ||||||||||||||||
seq2  TTTCAGACCATAAGAATATTCATACAGGAGAGA  331