BAC Information

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BAC

Clone NameB6Ng01-094J09
Chromosome13 (Build37)
Map Location 33,950,835 - 34,066,151
singlet/doubletdoublet
Overlap geneSerpinb6c, Serpinb6a, Nqo2
Upstream geneSerpinb1-ps1, Serpinb1c, Serpinb6b, Serpinb9, Serpinb9b, Serpinb1b, LOC628301, Serpinb9c, Serpinb9d, Serpinb9e, Serpinb9f, OTTMUSG00000000724, Serpinb9g, LOC100041370, EG619715, LOC382743, OTTMUSG00000000712, LOC193403, Vmn2r-ps94, OTTMUSG00000000720
Downstream gene4930482L21Rik, Ripk1, Bphl, Tubb2a, LOC100042686, Tubb2b, 2310047M15Rik, 3110004L20Rik, LOC620132, EG666666, 1300014I06Rik, D0H6S2654E, EG432746, LOC666677, Prpf4b, 4933417A18Rik, LOC666697, 1810022C23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094J09.bB6Ng01-094J09.g
ACCDH905765DH905766
length1,124946
definitionDH905765|Mus musculus domesticus DNA, BAC clone: B6Ng01-094J09, 5' end.DH905766|Mus musculus domesticus DNA, BAC clone: B6Ng01-094J09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,950,835 - 33,951,971)(34,065,521 - 34,066,151)
sequence
gggcagccccagaagttgctggagaggtaggcagggcatttgagaacatt
caacagaagtgaagttagaaaatcaggccttctcactgagacacctagag
gatgatctggtgagaacagagtgagttgagccaccaagatgacatcaaga
gaaggcagggaatgactgagacaaaaaggcaagatagcatgatcaaacca
gtggaggcaaagtgcatttgaaggtaacctgcctctattaaaccctaggc
ttcctgagccttatttgcattagcccagatgtgcagcacttttggaacag
ttcagaacctcatctgtggccttttcccagagtgtccattccttcaggaa
acaggcacagcatccaacatggcatggaggacctcagctgcaagggcatt
cacaacctaggagtccttactaccaggcctcatagctgaaccttgggcag
aagcactcactcaccagttggccaagatcaggaagactgggccacaagac
tctctggttacctgaaacgtgtctcttgactttgttcagtgtgaaacaat
agggttgtggccaaataaaactgggccagagcctggggcatctcaaggca
ggggccaggtgacaaggttggaggttaaaggctcaggacatctgagacca
aagaggagaaacctgtaagacaggagcagggactgggaatcagtctaagg
ggcagagactgcatctgtgcaagtaggggttggagggtaaaggctcagac
atctgagaccaaagaggagaagcctgtaaaacatgggcagggactgggaa
tcagctaaggggcagagattgcacctgtgagagtagtgcatccttggtta
gactactcaggccctggtgcagtgtaagagaggtgaggagaaggataggt
ctagggaaaaagtcaagagacttgtgtcataccccaaggaaaccaatctg
ctacttttacccacactcttatttcttatctaccctatcatatgtaccat
acccattcattctgtttccatgaaagagtacctaacaacaaactaagcca
ggactcctggcattagtcccctggcattgaacagcatctcatctggagca
gtgggagggaagacagtccaaaag
gaattctccctaagtttacctatatggttaatggaaccttggcaaaaata
tcactggatttcttttttaatctggaatgcttacttaaagactttatgga
aaactaaagtaaaaatcatcaccaaaactaggaagcgacagtgacctacc
ttgatcagacatgaaattctatgtatgtatgtatctagatataggtatag
atataaataaatattattatgtgtgttgattctcaggaaatacttcctgg
aagattttacctcagtgatgctggtttcttcttaattactgctaatttct
cagctctagctaaccagaatctgtaccactgtggtggtttgaaatagatt
gacccccataggctcacatatttgaatacttaaatcagttggtagactgg
gaaagattaagagccttgtggaggacgtgtgtcactgggagtaggctttg
aggtttcaaaagcccacaccagatctagtgtcttcattttctgcctgcag
atcaggttgtggctctgagctatcttttcagtaccatacctgtctgcatg
caccacactccctacaatgatgataatagtctaaccctctgaaactgtaa
gcaaggccccaattaagtgctttcttttaaaagagttgctttggtcatgg
tgtatctttacagcaatagaactgtgactaagacacacccagcaaaataa
gtatttcacttcatggtgctggttgcttgttaatcacagctgactcttca
gcctcaactgaccagaaaatgccctctatagtctttaagtaactctcaaa
ctttcctctagatcttcacaagtcacgcctccaccatttgcatttcttgt
aacattcttttcctccaagcccccacgaaacagttccaccaagcttttct
cactcaaaccttcaatggcctttttacccaaagtaccaaatccttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_33950835_33951971
seq2: B6Ng01-094J09.b_57_1180

seq1  GGGCAGCCCCAGAAGTTGCTGGAGAGGTAGGCAGGGCATTTGAGAACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGCCCCAGAAGTTGCTGGAGAGGTAGGCAGGGCATTTGAGAACATT  50

seq1  CAACAGAAGTGAAGTTAGAAAATCAGGCCTTCTCACTGAGACACCTAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGAAGTGAAGTTAGAAAATCAGGCCTTCTCACTGAGACACCTAGAG  100

seq1  GATGATCTGGTGAGAACAGAGTGAGTTGAGCCACCAAGATGACATCAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATCTGGTGAGAACAGAGTGAGTTGAGCCACCAAGATGACATCAAGA  150

seq1  GAAGGCAGGGAATGACTGAGACAAAAAGGCAAGATAGCATGATCAAACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCAGGGAATGACTGAGACAAAAAGGCAAGATAGCATGATCAAACCA  200

seq1  GTGGAGGCAAAGTGCATTTGAAGGTAACCTGCCTCTATTAAACCCTAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGGCAAAGTGCATTTGAAGGTAACCTGCCTCTATTAAACCCTAGGC  250

seq1  TTCCTGAGCCTTATTTGCATTAGCCCAGATGTGCAGCACTTTTGGAACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAGCCTTATTTGCATTAGCCCAGATGTGCAGCACTTTTGGAACAG  300

seq1  TTCAGAACCTCATCTGTGGCCTTTTCCCAGAGTGTCCATTCCTTCAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAACCTCATCTGTGGCCTTTTCCCAGAGTGTCCATTCCTTCAGGAA  350

seq1  ACAGGCACAGCATCCAACATGGCATGGAGGACCTCAGCTGCAAGGGCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCACAGCATCCAACATGGCATGGAGGACCTCAGCTGCAAGGGCATT  400

seq1  CACAACCTAGGAGTCCTTACTACCAGGCCTCATAGCTGAACCTTGGGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACCTAGGAGTCCTTACTACCAGGCCTCATAGCTGAACCTTGGGCAG  450

seq1  AAGCACTCACTCACCAGTTGGCCAAGATCAGGAAGACTGGGCCACAAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTCACTCACCAGTTGGCCAAGATCAGGAAGACTGGGCCACAAGAC  500

seq1  TCTCTGGTTACCTGAAACGTGTCTCTTGACTTTGTTCAGTGTGAAACAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGTTACCTGAAACGTGTCTCTTGACTTTGTTCAGTGTGAAACAAT  550

seq1  AGGGTTGTGGCCAAATAAAACTGGGCCAGAGCCTGGGGCATCTCAAGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTGTGGCCAAATAAAACTGGGCCAGAGCCTGGGGCATCTCAAGGCA  600

seq1  GGGGCCAGGTGACAAGGTTGGAGGTTAAAGGCTCAGGACATCTGAGACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCAGGTGACAAGGTTGGAGGTTAAAGGCTCAGGACATCTGAGACCA  650

seq1  AAGAGGAGAAACCTGTAAGACAGGAGCAGGGACTGGGAATCAGTCTAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAGAAACCTGTAAGACAGGAGCAGGGACTGGGAATCAGTCTAAGG  700

seq1  GGCAGAGACTGCATCTGTGCAAGTAGGGGTTGGAGGGTAAAGGCTCAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGCAGAGACTGCATCTGTGCAAGTAGGGGTTGGAGGGTAAAGGCTCA-GA  749

seq1  CATCTGAGACCAAAGAGGAGAAGCCTGTAAAACATGGGCAGGGACTGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGAGACCAAAGAGGAGAAGCCTGTAAAACATGGGCAGGGACTGGGA  799

seq1  ATCAGGCTAAGGGGCAGAGATTGCACCTGTGAGAGTAGTGCATCCTTGGT  850
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCA-GCTAAGGGGCAGAGATTGCACCTGTGAGAGTAGTGCATCCTTGGT  848

seq1  TAGACTACTCAGGCCCTGGTGCAGTGTAAGAGAGGTGAGGAGAAGGATAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTACTCAGGCCCTGGTGCAGTGTAAGAGAGGTGAGGAGAAGGATAG  898

seq1  GTCTAGGGAAAAAGTCAAGAGACTTGTGTCATACCCCCAAGGAAACCAAT  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GTCTAGGGAAAAAGTCAAGAGACTTGTGTCATA-CCCCAAGGAAACCAAT  947

seq1  CTGCTACTTTTACCCCAACAACTTCTTTATTTCTTATCTAACCCTATCAT  1000
      |||||||||||||||  ||    || ||||||||||||| ||||||||||
seq2  CTGCTACTTTTACCCACAC----TC-TTATTTCTTATCT-ACCCTATCAT  991

seq1  AATGTACCATACCCATTCATTCTGTTTCCATGAGAGAGTACCTAACAACA  1050
       |||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  -ATGTACCATACCCATTCATTCTGTTTCCATGAAAGAGTACCTAACAACA  1040

seq1  CACTAAGCCAAGACTCCTGGCATTAGTCCCCTGGCAATGGAACAGCATCT  1100
       ||||||||| |||||||||||||||||||||||| || |||||||||||
seq2  AACTAAGCCAGGACTCCTGGCATTAGTCCCCTGGC-ATTGAACAGCATCT  1089

seq1  CATCTGAGGCAGGTGGGAGGAAGGACAGGTCCAAAAG  1137
      ||||||  ||| |||||||| | |||| |||||||||
seq2  CATCTGGAGCA-GTGGGAGGGAAGACA-GTCCAAAAG  1124

seq1: chr13_34065521_34066151
seq2: B6Ng01-094J09.g_69_699 (reverse)

seq1  TTTAAAAGAAAGCACTTAATTGGGGCCTTGCTTACAGTTTCAGAGGGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGAAAGCACTTAATTGGGGCCTTGCTTACAGTTTCAGAGGGTTA  50

seq1  GACTATTATCATCATTGTAGGGAGTGTGGTGCATGCAGACAGGTATGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATTATCATCATTGTAGGGAGTGTGGTGCATGCAGACAGGTATGGTA  100

seq1  CTGAAAAGATAGCTCAGAGCCACAACCTGATCTGCAGGCAGAAAATGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAAGATAGCTCAGAGCCACAACCTGATCTGCAGGCAGAAAATGAAG  150

seq1  ACACTAGATCTGGTGTGGGCTTTTGAAACCTCAAAGCCTACTCCCAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAGATCTGGTGTGGGCTTTTGAAACCTCAAAGCCTACTCCCAGTGA  200

seq1  CACACGTCCTCCACAAGGCTCTTAATCTTTCCCAGTCTACCAACTGATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGTCCTCCACAAGGCTCTTAATCTTTCCCAGTCTACCAACTGATTT  250

seq1  AAGTATTCAAATATGTGAGCCTATGGGGGTCAATCTATTTCAAACCACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTCAAATATGTGAGCCTATGGGGGTCAATCTATTTCAAACCACCA  300

seq1  CAGTGGTACAGATTCTGGTTAGCTAGAGCTGAGAAATTAGCAGTAATTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTACAGATTCTGGTTAGCTAGAGCTGAGAAATTAGCAGTAATTAA  350

seq1  GAAGAAACCAGCATCACTGAGGTAAAATCTTCCAGGAAGTATTTCCTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAACCAGCATCACTGAGGTAAAATCTTCCAGGAAGTATTTCCTGAG  400

seq1  AATCAACACACATAATAATATTTATTTATATCTATACCTATATCTAGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACACACATAATAATATTTATTTATATCTATACCTATATCTAGATA  450

seq1  CATACATACATAGAATTTCATGTCTGATCAAGGTAGGTCACTGTCGCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATACATAGAATTTCATGTCTGATCAAGGTAGGTCACTGTCGCTTC  500

seq1  CTAGTTTTGGTGATGATTTTTACTTTAGTTTTCCATAAAGTCTTTAAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTTGGTGATGATTTTTACTTTAGTTTTCCATAAAGTCTTTAAGTA  550

seq1  AGCATTCCAGATTAAAAAAGAAATCCAGTGATATTTTTGCCAAGGTTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCCAGATTAAAAAAGAAATCCAGTGATATTTTTGCCAAGGTTCCA  600

seq1  TTAACCATATAGGTAAACTTAGGGAGAATTC  631
      |||||||||||||||||||||||||||||||
seq2  TTAACCATATAGGTAAACTTAGGGAGAATTC  631