BAC Information

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BAC

Clone NameB6Ng01-094P02
Chromosome13 (Build37)
Map Location 66,164,007 - 66,165,135
singlet/doubletsinglet
Overlap genenone
Upstream geneHiatl1, LOC100042311, Olfr465-ps1, Olfr466, Nlrp4f, ENSMUSG00000074847, Zfp369, LOC100042347, LOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777, EG628648, LOC665809, LOC100042404, LOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434
Downstream geneLOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094P02.b
ACCDH906021
length1,123
definitionDH906021|Mus musculus domesticus DNA, BAC clone: B6Ng01-094P02, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagcaggtgctgtgatattttgtaccttcttttggtggctggac
agatgactccgtgtcatggaatctgtctccctcttgtggccttcaggtgt
aaatgcaggcagtactctgtatacttaataaataaataaatctttaaaag
aaagaagaaaagaaaattccttatggaagtttcttatagatttgggagtg
atgactggatgagcgatcctgcttccatttctccttccaggcgtcttcaa
gagctgagggtctgctctcagggcggctcagagggagacagagacgctgc
atttataggattggaagggaagcaaggacaggcgctgtaatgggaagagc
tcatcactagtgggcaaccttcccgggatgggaactggaagtagcagcgc
cacaccagggctgccagcactgccgcaactaggatcatgggggtccaggt
gcagggacagagcacttgtgcacattcgcgcatgtggtggggcgggggtc
tgtgggacaggcagggaggcggtgcagaacggcgagggcggcgaccctga
gcactcagcaggatcccagcaaaaggcatagccatttggagagcatagga
gtcatgcagggtcacacccatggctgtgtcctccctagggtctgtcctgc
cagtgccagggccctcccttctacaccctcccacctctctcttccccctg
gggccttaggtcacacagctgtcttgggggcggggcgagggggcagggtt
ggaggatggccagagttcacccaaggtctcctggatggcatggtgatccc
agtccctggcagcagtgaccaatagccacctatgtgatccctgacctata
cttggaccccaactttagacctgaccctgacatcatatgtaaaccccaac
ctttgaccccatcatgacctctatatgctctgtgaccaggatgacactct
cctatacccttgacagaccctggacactgttcacacactccaaacagctc
tgccctgtccactattgcacttcaaggttctgaccctagcccccaccacc
atgcatcagtggattccctggtgaatggattctgcccccccccatgttca
catgcttaggccagtcttccggg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_66164007_66165135
seq2: B6Ng01-094P02.b_48_1170

seq1  GAATTCCAGCAGGTGCTGGGATATTTTGTACCTTCTTTTGGTGGCTGGAC  50
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GAATTCCAGCAGGTGCTGTGATATTTTGTACCTTCTTTTGGTGGCTGGAC  50

seq1  AGATGACTCCGTGTCATGGAATCTGGCTCCCTCTTGTGGCCTTCAGGTGT  100
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGATGACTCCGTGTCATGGAATCTGTCTCCCTCTTGTGGCCTTCAGGTGT  100

seq1  AAATGCAGGCAGTACTCTGTATACTTAATAAATAAATAAATCTTTAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAGGCAGTACTCTGTATACTTAATAAATAAATAAATCTTTAAAAG  150

seq1  AAAGAAGAAAAGAAAATTCCTTATGGAAGTTTCTTATAGATTTGGGAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGAAAAGAAAATTCCTTATGGAAGTTTCTTATAGATTTGGGAGTG  200

seq1  ATGACTGGATGAGCGATCCTGCTTCCATTTCTCCTTCCAGGCGTCTTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTGGATGAGCGATCCTGCTTCCATTTCTCCTTCCAGGCGTCTTCAA  250

seq1  GAGCTGAGGGTCTGCTCTCAGGGCGGCTCAGAGGGAGACAGAGACGCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGAGGGTCTGCTCTCAGGGCGGCTCAGAGGGAGACAGAGACGCTGC  300

seq1  ATTTATAGGATTGGAAGGGAAGCAAGGACAGGCGCTGTAATGGGAAGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAGGATTGGAAGGGAAGCAAGGACAGGCGCTGTAATGGGAAGAGC  350

seq1  TCATCACTAGTGGGCAACCTTCCCGGGATGGGAACTGGAAGTAGCAGCGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACTAGTGGGCAACCTTCCCGGGATGGGAACTGGAAGTAGCAGCGC  400

seq1  CACACCAGGGCTGCCAGCACTGCCGCAACTAGGATCATGGGGGTCCAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCAGGGCTGCCAGCACTGCCGCAACTAGGATCATGGGGGTCCAGGT  450

seq1  GCAGGGACAGAGCACTTGTGCACATTCGCGCGTGTGGCGGGGCGGGGGTC  500
      ||||||||||||||||||||||||||||||| ||||| ||||||||||||
seq2  GCAGGGACAGAGCACTTGTGCACATTCGCGCATGTGGTGGGGCGGGGGTC  500

seq1  TGTGGGACAGGCAGGGAGGCGGTGCAGAACGGCGAGGGCGGCGACCCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGACAGGCAGGGAGGCGGTGCAGAACGGCGAGGGCGGCGACCCTGA  550

seq1  GCACTCAGCAGGATCCCAGCAAAAGGCATAGCCATTTGGAGAGCATAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCAGCAGGATCCCAGCAAAAGGCATAGCCATTTGGAGAGCATAGGA  600

seq1  GTCATGCGGGGTCACACCCATGGCTGTGTCCTCCCTCAGGTCTGTCCTGC  650
      ||||||| ||||||||||||||||||||||||||||  ||||||||||||
seq2  GTCATGCAGGGTCACACCCATGGCTGTGTCCTCCCTAGGGTCTGTCCTGC  650

seq1  CAGTGCCAGGGCCCTCCCTTCTACACCCTCCCACCTCTCTCTTCCCCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCCAGGGCCCTCCCTTCTACACCCTCCCACCTCTCTCTTCCCCCTG  700

seq1  GGG-CTTGGGTCACACAGCTGTCTTGGGGGCGGGGCGAGGGGGCAGGGTT  749
      ||| ||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTTAGGTCACACAGCTGTCTTGGGGGCGGGGCGAGGGGGCAGGGTT  750

seq1  GGAGGATGGCCAGAGTTCACCCAAGGTCTCCTGGATGGCATGGTGATCCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGATGGCCAGAGTTCACCCAAGGTCTCCTGGATGGCATGGTGATCCC  800

seq1  AGTCCCTGGCAGCAGTGACCAATAGCCACCTATGTGATCCCTGACCTATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCTGGCAGCAGTGACCAATAGCCACCTATGTGATCCCTGACCTATA  850

seq1  CTTGGACCCCAACTTTAGACCTGACCCTGACATCATATGTAAACCCCAAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGACCCCAACTTTAGACCTGACCCTGACATCATATGTAAACCCCAAC  900

seq1  CTTTGACCCCATCATGACCTCTATATTGCCCTGTGACCAGGATGACACTG  949
      ||||||||||||||||||||||||| ||| ||||||||||||||||||| 
seq2  CTTTGACCCCATCATGACCTCTATA-TGCTCTGTGACCAGGATGACACTC  949

seq1  TCCTATAACCCTGAGAAGACCCT-GACACTGTCCACCACACTCCAAACCA  998
      ||||||| || |||  ||||||| |||||||| || ||||||||||| ||
seq2  TCCTATACCCTTGA-CAGACCCTGGACACTGTTCA-CACACTCCAAA-CA  996

seq1  GCCTCTGTCCTGTCCACTA-TGCAC-TCCAGGTTCTGACCCCTAGCCCCC  1046
      | ||||| ||||||||||| ||||| || ||||||||| |||||||||||
seq2  G-CTCTGCCCTGTCCACTATTGCACTTCAAGGTTCTGA-CCCTAGCCCCC  1044

seq1  ACCA-CATGCATCAGT-GATTCCCTGGTGATATTGGAATTCCGCGCCCCC  1094
      |||| ||||||||||| ||||||||||||| ||  | ||||   ||||||
seq2  ACCACCATGCATCAGTGGATTCCCTGGTGA-AT--GGATTC--TGCCCCC  1089

seq1  CCCCATG-TCACATGGCTAGGCCCAGTCTTTCCGGG  1129
      ||||||| |||||||  |||| |||||| |||||||
seq2  CCCCATGTTCACATGCTTAGG-CCAGTC-TTCCGGG  1123