BAC Information

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BAC

Clone NameB6Ng01-095I03
Chromosome13 (Build37)
Map Location 32,818,049 - 32,944,230
singlet/doubletdoublet
Overlap geneWrnip1, Serpinb1a
Upstream geneFoxc1, 4930548F15Rik, Gmds, LOC666212
Downstream geneSerpinb1-ps1, Serpinb1c, Serpinb6b, Serpinb9, Serpinb9b, Serpinb1b, LOC628301, Serpinb9c, Serpinb9d, Serpinb9e, Serpinb9f, OTTMUSG00000000724, Serpinb9g, LOC100041370, EG619715, LOC382743, OTTMUSG00000000712, LOC193403, Vmn2r-ps94, OTTMUSG00000000720
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095I03.bB6Ng01-095I03.g
ACCDH906433DH906434
length1,130763
definitionDH906433|Mus musculus domesticus DNA, BAC clone: B6Ng01-095I03, 5' end.DH906434|Mus musculus domesticus DNA, BAC clone: B6Ng01-095I03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,943,067 - 32,944,230)(32,818,049 - 32,818,828)
sequence
gaattctccatgttcaagactcagcatctgaactagccttcatctagaca
aggtcccagaaagtgtaaggcatcaaggtatcataggggggaaaaaagga
gcgcagatctatctcttctgatcttctcatctctccttctcttattaaag
cttggagtcatagtccttaagagctggggcgtgctcgccacctagtggtc
atgaagatgatattctggaattcagtcaggcgtccccaccctgagaaccc
tgtgtaatcttaatcacttctcaaagtcctcacctcccaaacaccacaca
cgaagtttctatcttctgatacctcacaataggcattatatccaacacgg
gagtgctcaagagacgtgctgacccacctccccatcttcctttctcctct
tttagttcccgagtctaacaaacactaatccatgtgttgtgaccctcacc
tacagtaggattcttcctttgtcctctgaagaaagacaagaagcactaaa
agttctgtgaatttacagttccaaacacttcaaggagaataaagctgagc
ccatcaagttaacaatggcctgggctagtcaattctaatttaagttgcat
agtgaggggatttgtccaaacttttagtctaatagtggggaattgtgggt
tgagggcttctccagcctggtgtggtccctgagctagccttggcacctga
aaggcagagaagacaaggatcacctattgcttgtaactggcaatctggga
ccttatccaaaggaccccaaagatatttctccatccctacctacataccg
cacagaaaggattccttttgattttacagcgtttcagtggaattcaagaa
ggtatcttttgacctggaagaaaggacatttatttattctcttggccatt
tgcagctgaggaagaaataacttaccagatctctgctaaagaaatatatt
atatatatatattatatattatatattaatgcctgctactgagtaagtaa
gtcccttgagagtggccacatctctgctttattttgacagcctcaagtcg
ggtttaaactcagccagaaaggcgctcaccagcttggcttgcaggaagaa
ccgccttctgcatgcctattaaggcaacag
gaattcttcaggaaacattcatttcttcagattttattcaggctgggaag
atatctcagcaggtaagagagtcttgtgcgcaagcctaaagacctgagtt
tggatccctaggatccaagtaaaagcctagcaatgtaacccaatgttatg
gacacaagcttcagtctcaaagggctatggtgggaaataaggacatatga
tgcccttctctggcctccacactatacaggtacacactctgagcacatat
atttataggctatatatatatatacatatacatatatattatcatatatg
aatatatatatgaatatcataatattcatgcatacttaaaatagataata
gatgatagattgtaaatagataataaatagatcatagacagataacagat
caattataaatagatgatagatagatagataggtaaatagatagatagat
agatagatagatagatagatagataggcaggaaggtaggcagacagacag
acagaactgtttctcttgcctatgcaaagatcaagttaaacataataatg
atattaatatggcatatatctccataaagctgttaagataagagaagtta
agttgggatccttcatggaatagttaggaagctttaaaagtccagaaaaa
ggcatttctacccagtgggactcaggtcttgctctctagaggtggtcatt
catctgagtctatcaccagcttggcttgctgtttctttgtctagcttggg
ctcttccctcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_32943067_32944230
seq2: B6Ng01-095I03.b_45_1174 (reverse)

seq1  CTGTTGCCTTTATA-GCATGCAGAAGGGGCGTGTCTTCCTGGCAAGCCCA  49
      |||||||||| ||| ||||||||||  ||||  ||||||| ||||| |||
seq2  CTGTTGCCTTAATAGGCATGCAGAA--GGCGGTTCTTCCT-GCAAG-CCA  46

seq1  AGCTGGGTGGAGGCGCCTTTTCTTGGCTGAGTGTTTAAAACCCGACCTTG  99
      |||| ||||   ||||||||   ||||||||   || |||||||| ||||
seq2  AGCT-GGTG--AGCGCCTTT--CTGGCTGAG---TTTAAACCCGA-CTTG  87

seq1  GAGGGCTGTCAAAATAAAAGCAGAAGATTGTGGCCACTCTCAAGGGGACT  149
         |||||||||||| ||||||| ||| ||||||||||||||| ||||| 
seq2  --AGGCTGTCAAAAT-AAAGCAG-AGA-TGTGGCCACTCTCAA-GGGAC-  130

seq1  TTACTTTCCTCAGTTGCAGGCCTTTTTATTATTATTATTATTATTATTAT  199
      |||| || |||||| ||||||         |||| || ||| ||   || 
seq2  TTAC-TTACTCAGTAGCAGGC---------ATTAATA-TATAATATATAA  169

seq1  TATTATTATTATTATTATTATTTCTTTAAGCAGAGATCTGGTAAGTTATT  249
      || |||   ||| ||   ||||||||| ||||||||||||||||||||||
seq2  TA-TATATATATAAT--ATATTTCTTT-AGCAGAGATCTGGTAAGTTATT  215

seq1  TCTTCCTCAGCTGCAAATGGCCAAGAGAATAAATAAATGTCCTTTCTTCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTCAGCTGCAAATGGCCAAGAGAATAAATAAATGTCCTTTCTTCC  265

seq1  AGGTCAAAAGATACCTTCTTGAATTCCACTGAAACGCTGTAAAATCAAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAAAGATACCTTCTTGAATTCCACTGAAACGCTGTAAAATCAAAA  315

seq1  GGAATCCTTTCTGTGCGGTATGTAGGTAGGGATGGAGAAATATCTTTGGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCCTTTCTGTGCGGTATGTAGGTAGGGATGGAGAAATATCTTTGGG  365

seq1  GTCCTTTGGATAAGGTCCCAGATTGCCAGTTACAAGCAATAGGTGATCCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTGGATAAGGTCCCAGATTGCCAGTTACAAGCAATAGGTGATCCT  415

seq1  TGTCTTCTCTGCCTTTCAGGTGCCAAGGCTAGCTCAGGGACCACACCAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCTCTGCCTTTCAGGTGCCAAGGCTAGCTCAGGGACCACACCAGG  465

seq1  CTGGAGAAGCCCTCAACCCACAATTCCCCACTATTAGACTAAAAGTTTGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGAAGCCCTCAACCCACAATTCCCCACTATTAGACTAAAAGTTTGG  515

seq1  ACAAATCCCCTCACTATGCAACTTAAATTAGAATTGACTAGCCCAGGCCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCCCCTCACTATGCAACTTAAATTAGAATTGACTAGCCCAGGCCA  565

seq1  TTGTTAACTTGATGGGCTCAGCTTTATTCTCCTTGAAGTGTTTGGAACTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAACTTGATGGGCTCAGCTTTATTCTCCTTGAAGTGTTTGGAACTG  615

seq1  TAAATTCACAGAACTTTTAGTGCTTCTTGTCTTTCTTCAGAGGACAAAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCACAGAACTTTTAGTGCTTCTTGTCTTTCTTCAGAGGACAAAGG  665

seq1  AAGAATCCTACTGTAGGTGAGGGTCACAACACATGGATTAGTGTTTGTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCCTACTGTAGGTGAGGGTCACAACACATGGATTAGTGTTTGTTA  715

seq1  GACTCGGGAACTAAAAGAGGAGAAAGGAAGATGGGGAGGTGGGTCAGCAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCGGGAACTAAAAGAGGAGAAAGGAAGATGGGGAGGTGGGTCAGCAC  765

seq1  GTCTCTTGAGCACTCCCGTGTTGGATATAATGCCTATTGTGAGGTATCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTGAGCACTCCCGTGTTGGATATAATGCCTATTGTGAGGTATCAG  815

seq1  AAGATAGAAACTTCGTGTGTGGTGTTTGGGAGGTGAGGACTTTGAGAAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAGAAACTTCGTGTGTGGTGTTTGGGAGGTGAGGACTTTGAGAAGT  865

seq1  GATTAAGATTACACAGGGTTCTCAGGGTGGGGACGCCTGACTGAATTCCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAGATTACACAGGGTTCTCAGGGTGGGGACGCCTGACTGAATTCCA  915

seq1  GAATATCATCTTCATGACCACTAGGTGGCGAGCACGCCCCAGCTCTTAAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCATCTTCATGACCACTAGGTGGCGAGCACGCCCCAGCTCTTAAG  965

seq1  GACTATGACTCCAAGCTTTAATAAGAGAAGGAGAGATGAGAAGATCAGAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATGACTCCAAGCTTTAATAAGAGAAGGAGAGATGAGAAGATCAGAA  1015

seq1  GAGATAGATCTGCGCTCCTTTTTTCCCCCCTATGATACCTTGATGCCTTA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAGATCTGCGCTCCTTTTTTCCCCCCTATGATACCTTGATGCCTTA  1065

seq1  CACTTTCTGGGACCTTGTCTAGATGAAGGCTAGTTCAGATGCTGAGTCTT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCTGGGACCTTGTCTAGATGAAGGCTAGTTCAGATGCTGAGTCTT  1115

seq1  GAACATGGAGAATTC  1164
      |||||||||||||||
seq2  GAACATGGAGAATTC  1130

seq1: chr13_32818049_32818828
seq2: B6Ng01-095I03.g_67_829

seq1  GAATTCTTCAGGAAACATTCATTTCTTCAGATTTTATTCAGGCTGGGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGGAAACATTCATTTCTTCAGATTTTATTCAGGCTGGGAAG  50

seq1  ATATCTCAGCAGGTAAGAGAGTCTTGTGCGCAAGCCTAAAGACCTGAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTCAGCAGGTAAGAGAGTCTTGTGCGCAAGCCTAAAGACCTGAGTT  100

seq1  TGGATCCCTAGGATCCAAGTAAAAGCCTAGCAATGTAACCCAATGTTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCCCTAGGATCCAAGTAAAAGCCTAGCAATGTAACCCAATGTTATG  150

seq1  GACACAAGCTTCAGTCTCAAAGGGCTATGGTGGGAAATAAGGACATATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAAGCTTCAGTCTCAAAGGGCTATGGTGGGAAATAAGGACATATGA  200

seq1  TGCCCTTCTCTGGCCTCCACACTATACAGGTACACACTCTGAGCACATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTTCTCTGGCCTCCACACTATACAGGTACACACTCTGAGCACATAT  250

seq1  ATTTATAGGCTATATATATATATACATATACATATATATTATCATATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAGGCTATATATATATATACATATACATATATATTATCATATATG  300

seq1  AATATATATATGAATATCATAATATTCATGCATACTTAAAATAGATAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATATATGAATATCATAATATTCATGCATACTTAAAATAGATAATA  350

seq1  GATGATAGATTGTAAATAGATAATAAATAGATCATAGACAGATAACAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATAGATTGTAAATAGATAATAAATAGATCATAGACAGATAACAGAT  400

seq1  CAATTATAAATAGATGATAGATAGATAGATAGGTAAATAGATAGATAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATAAATAGATGATAGATAGATAGATAGGTAAATAGATAGATAGAT  450

seq1  AGATAGATAGATAGATAGATAGATAGGCAGGAAGGTAGGCAGACAGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATAGATAGATAGATAGATAGGCAGGAAGGTAGGCAGACAGACAG  500

seq1  ACAGAACTGTTTCTCTTGCCTATGCAAAGATCAAGTTAAACATAATAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACTGTTTCTCTTGCCTATGCAAAGATCAAGTTAAACATAATAATG  550

seq1  ATATTAATATGGCATATATCTCCATAAAGCTGTTAAGATAAGAGAAGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAATATGGCATATATCTCCATAAAGCTGTTAAGATAAGAGAAGTTA  600

seq1  AGTTGGGATCCTTCATGGAATAGTTAGGAAGCTTTAAAAGTCCAGAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGTTGGGATCCTTCATGGAATAGTTAGGAAGCTTTAAAAGTCCAG-AAAA  649

seq1  AGGCATTTCCTACCCAGTGGGACCTCCAGGTCTTGCTCTCTAGAGGTGGT  700
      |||||||| ||||||||||||||   ||||||||||||||||||||||||
seq2  AGGCATTT-CTACCCAGTGGGAC--TCAGGTCTTGCTCTCTAGAGGTGGT  696

seq1  CATTCCATCCTGGAGTCTATCACCCAGGCTTCTGGCTTGCCTGGTTTCCT  750
      |||| ||||   ||||||||||||   |||  ||||||| |||  || ||
seq2  CATT-CATC--TGAGTCTATCACC--AGCT--TGGCTTG-CTG--TTTCT  736

seq1  CTGTCCTAGCTGTGGGCTCTTCCCCTCTTC  780
       ||| |||||| ||||||||| ||||||||
seq2  TTGT-CTAGCT-TGGGCTCTT-CCCTCTTC  763