BAC Information

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BAC

Clone NameB6Ng01-097L18
Chromosome13 (Build37)
Map Location 17,554,966 - 17,555,267
singlet/doubletsinglet
Overlap gene5033411D12Rik
Upstream geneLOC665191
Downstream gene2810021B07Rik, Cdc2l5, Rala, LOC434585, LOC382732, 1600012F09Rik, Vdac3-ps1, LOC625310, 4930448F12Rik, Pou6f2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097L18.bB6Ng01-097L18.g
ACCDH908023DH908024
length691982
definitionDH908023|Mus musculus domesticus DNA, BAC clone: B6Ng01-097L18, 5' end.DH908024|Mus musculus domesticus DNA, BAC clone: B6Ng01-097L18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctaatctttccaagacttttaccccgaaggagtgttagattttg
tcaaaggctttctcagaatctaaagaaatgatcatgtgaatatttttttt
gagtttgtttatgtagtggattacgttgatggatttccatatattaaatc
atcctgcatccctgggatgaagcctacttgatcatgatggatgattgttt
tgatgtgtttttggatttagtttgcaagaattttattatttttgcattga
tattcataagggaaattagtctgaatttctttttctttgttgtgtctttg
catggtttttaattggatttcttcagctattgtttatattccaatataag
tattttttctaacttatttaactcattttactatatgcataaatatatta
ctttaaaagggctagccacctgttttaccagacttctaaaaggatatatc
ataaagaagaaaattagtaaatagcaatatttaggaaataattcaattcc
tgtttaaaaactgatttaataatccattctagttccattttttagtagtt
ttataatttttaatcaatgtttaaaatagttcatatttttcatttctaat
tttctggattgatacaagtactgtgctacactatgtagagaactctactg
taaactgaacacaattgaagaggaagctgtctaataaattc
gaattctcccataaatattgtatgaggtttaatgtgtgctttgagcttta
gtaaagtttcttttatgaatgtgggtgcccttgcatttggagcataagtt
ttcagaattgagagttcatcttggtaaagatttcctttggtgagtatgaa
gtgtccttccttattctttttgataacttttggcttcaagtctattttat
tctgtattagaatgactattccagcttgtttcttgggaccatttgcttgg
aaaattgttttccagccttttattctgaggtagtgtctgtttttgacact
gaggtgtgttttctatatgtagggaaatgctgggtcctgtttatgtatcc
agtctgttttttgttgtctttttattggggaattgaatacattgatatta
agagatattaaagaatagtgaatattttatcctgttatttttattgttag
agttggaattatgttagtgtagctatctctttctgggtttgttgaaagaa
aattattttctttctttctctagggtgtagtttccctccctgtgttggag
ttttccatctgttatccttttgtatagctgaatttgtggaaagatattgt
gtaaatatgttttttgtcatggaatgtctcggtttttccatctatggtaa
ttgagagtttttgctgggtatagtagcctgggctggcattttgtgttgtc
tttgaggtctgtatgacatctgcccagtatattcctgcctttatagactc
tggtgagaagtctggtgtaaatctgataggttctgccgttatatgttact
tgactttttcccttactgctttttaatattctttcttttgtttgtgcatt
tggtgttttggactattatgtgagggagaatttcttttctggtccaatga
tttggttgttctgttgctctattgtcttaggtatattctccttctatagg
gacagttgtctcgataaaactattgataaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_17554966_17555267
seq2: B6Ng01-097L18.b_43_341 (reverse)

seq1  AAAGACCCAACTAAGATAAAGAATTTCAGACCAATTTCCCTTATGAATAT  50
      |||||| |||| |||| |||||| ||||||| ||||||||||||||||||
seq2  AAAGACACAACAAAGAAAAAGAAATTCAGACTAATTTCCCTTATGAATAT  50

seq1  CAATGCAAAAATCCTCAAAGTGCTCACTAACCGAATCCAAGAACACATCA  100
      ||||||||||||  | ||| | ||  | |||  ||||||| |||||||||
seq2  CAATGCAAAAATAAT-AAAATTCTTGCAAACTAAATCCAAAAACACATCA  99

seq1  AAACAATCATCCATCCTGACCAAGTTAGGCTTCATCCCAGGGATGTAGGG  150
      ||||||||||||||| ||| |||| |||||||||||||||||||| | ||
seq2  AAACAATCATCCATCATGATCAAG-TAGGCTTCATCCCAGGGATGCA-GG  147

seq1  ATGGTTCAATATACGGAAATAAATCAACATAATCCAGAATATAAACAAAC  200
      ||| || |||||| ||||||  |||||| |||||||  | ||||||||||
seq2  ATGATTTAATATATGGAAATCCATCAACGTAATCCACTACATAAACAAAC  197

seq1  TCAAAGACAAAAACCACATGATCATCTTGTTAGATGTGGAAAAAGCATTC  250
      ||||| | || |  ||||||||||| |  ||||||   || ||||| || 
seq2  TCAAAAAAAATATTCACATGATCATTTCTTTAGATTCTGAGAAAGCCTTT  247

seq1  GACGAAATCCAACACCCATTCATGATAAAAGTCTTGGAAAGATCAGGAAT  300
      ||| ||||| ||||| | |||  | |||||||||||||||||| ||||||
seq2  GACAAAATCTAACACTCCTTCGGGGTAAAAGTCTTGGAAAGATTAGGAAT  297

seq1  TC  302
      ||
seq2  TC  299