BAC Information

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BAC

Clone NameB6Ng01-097M07
Chromosome13 (Build37)
Map Location 76,997,838 - 76,998,807
singlet/doubletsinglet
Overlap geneMctp1
Upstream geneRhobtb3, LOC666553, LOC622313, Spata9, Rfesd, LOC100043008, Gpr150, Arsk, AK129128, Gm276, LOC666603
Downstream geneEG666607, Ankrd32, 2210408I21Rik, LOC631139, LOC675063, D13Mgi7, 1110033M05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097M07.bB6Ng01-097M07.g
ACCDH908048DH908049
length1,258967
definitionDH908048|Mus musculus domesticus DNA, BAC clone: B6Ng01-097M07, 5' end.DH908049|Mus musculus domesticus DNA, BAC clone: B6Ng01-097M07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaatatagtaaaaagcaatacgcagcaaacc
agtagccaacatcaaactatatggagagtaatttgaagcaatcccactaa
aatcagagaatgaacaaggcctcccactttctccctatctattcaatata
gttcttgaaattctagctagagcagttagacaacaaaagaaggacaaaat
gatactaattggaaaggaagaagtaaaaatatcaatattttcagatgata
tgatagcatacataaatgaccccaaaaattccacctgagaactcataaac
cttataaacaacttcagcaaagaggctggatataaaattaactcaaagaa
atcagtagccttcctctactcaaaggataaacagaatgaaaaaagaaatt
agggaaatgacacccttcacaattgtcacaaataatataaaatatcttag
tttgactctaaccaagcaagtgaaatatctgtatgagaagaacttcaagt
ctctaaagaaagaaatccaaaaaaatctcagaagatgaaaagatcttcca
cgctcatagatctacaggattaatatagtaaaaatgaccatcttgctaaa
agcaatttacagattcaacacaatctccatcaaaattccaactcaatttt
ttcctaatgttagaaattttttataatgttagaaagatcaatttgcaaat
tcatttggaataccaaaaaacccaggatagaaaaaaaaaactattctcag
caataaaagaacttctatgaaaattatcatcccctgtcttcaagctgtat
tacagagcaatagtgaaaaaaaaaactgtatggctatttggtacagagac
aggcagatatatcagtgggaatagaattgaatacccagaaatgaatccat
acacctatggtcacttgatttctggcaaggagctaaaccaaccagtggaa
aaaaacacagcattttaacaaatgatgctgcttcaactggtggtcaacct
gtagagaatgcaaatcaatccaatcttatctccttgacaataatgcctca
agttcaggtgggatcacagactcccacataaaacagatacactgaactat
atagaaggacaaggtgtgaagagaacggaacttattggtacaaggggaat
ttctgaacgaacacattgccttatgtccttatgatccagaattggacaat
tggaacttataatctcgaaacttctcgtgaagcaagaaacactgtgtcta
tagtgaca
gaattcacagagactgaggcagcaagcataaacctgcataggtctgcacc
aggcccttaggctaaccagttcagtgtttcagtgggtgtgaataagtgag
tctctatctcttatgccttctcttgaaatcttctccttctatttgtttct
tttgtccaattccagtgtttcagtttcgttttatctttttatcagttagg
atatccattgttatgatgtaactccatgactaaaagcaagcagggcagaa
agggtttatttgacttaacacttctacatagttcatccctgaaggatgtc
aggatgggatctcaaacaggaaaggagcctggaggcagaagctgatgcag
aggccatggagggatgcttcttgctggcttgctcctcatgacttcctcag
actattttcttattaagtctggaaccaccagtccagggatggcaccaccc
caaataggctgggccctcctctgtcgattactaattaagaaaatgcctta
caggcttgcctatattcccatcgtatgaggaacattttcttaattgagtt
tccctccttttaacttgtgttgacataaaactttccagcaaattgtatta
catttaaaaaatataaaaaattaaattcttgaaaagaaggaaggaaggaa
ggaaggaaggaaggaaggaaggaaggaaggaaggaaagacaagaaaaggc
aggtttgcatatcattctcactttctctgcatgaagacagagctaacccc
tctttgacttcatagcttcatttcctccttaggttgtttttgctggggaa
atatgtctgcaatttgtttgactgacaagttaagcatttagatcttactc
cagtaactgctttctaaagtgcattgacttatttgactctctgttcacaa
ttttccttgttcttcagtgatttgacagaggctttttcatcttgctttgg
actatctgaacgatccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_76997838_76998807
seq2: B6Ng01-097M07.g_68_1034 (reverse)

seq1  GGGATCGTTCAGATAGTCCAAAGCAAGATGAAAAAGCCTCTGTCAAATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCGTTCAGATAGTCCAAAGCAAGATGAAAAAGCCTCTGTCAAATCA  50

seq1  CTGAAGAACAAGGAAAAATTGTGAACAGAGAGTCAAATAAGTCAAATGCA  100
      ||||||||||||| ||||||||||||||||||||||||||||| ||||||
seq2  CTGAAGAACAAGG-AAAATTGTGAACAGAGAGTCAAATAAGTC-AATGCA  98

seq1  CTTTTAGAAAGCAGTTACTGGAGTAAGATCTAAATGCTTAACTTGTCAGT  150
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-TTTAGAAAGCAGTTACTGGAGTAAGATCTAAATGCTTAACTTGTCAGT  147

seq1  CAAACAAATTGCAGACATATTTCCCCAGCAAAAACAACCTAAGGAGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAATTGCAGACATATTTCCCCAGCAAAAACAACCTAAGGAGGAAA  197

seq1  TGAAGCTATGAAGTCAAAGAGGGGTTAGCTCTGTCTTCATGCAGAGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTATGAAGTCAAAGAGGGGTTAGCTCTGTCTTCATGCAGAGAAAG  247

seq1  TGAGAATGATATGCAAACCTGCCTTTTCTTGTCTTTCCTTCCTTCCTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATGATATGCAAACCTGCCTTTTCTTGTCTTTCCTTCCTTCCTTCC  297

seq1  TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTTCAAGAATTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTTCAAGAATTTAA  347

seq1  TTTTTTATATTTTTTAAATGTAATACAATTTGCTGGAAAGTTTTATGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTATATTTTTTAAATGTAATACAATTTGCTGGAAAGTTTTATGTCA  397

seq1  ACACAAGTTAAAAGGAGGGAAACTCAATTAAGAAAATGTTCCTCATACGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGTTAAAAGGAGGGAAACTCAATTAAGAAAATGTTCCTCATACGA  447

seq1  TGGGAATATAGGCAAGCCTGTAAGGCATTTTCTTAATTAGTAATCGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATATAGGCAAGCCTGTAAGGCATTTTCTTAATTAGTAATCGACAG  497

seq1  AGGAGGGCCCAGCCTATTTGGGGTGGTGCCATCCCTGGACTGGTGGTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGCCCAGCCTATTTGGGGTGGTGCCATCCCTGGACTGGTGGTTCC  547

seq1  AGACTTAATAAGAAAATAGTCTGAGGAAGTCATGAGGAGCAAGCCAGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTAATAAGAAAATAGTCTGAGGAAGTCATGAGGAGCAAGCCAGCAA  597

seq1  GAAGCATCCCTCCATGGCCTCTGCATCAGCTTCTGCCTCCAGGCTCCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATCCCTCCATGGCCTCTGCATCAGCTTCTGCCTCCAGGCTCCTTT  647

seq1  CCTGTTTGAGATCCCATCCTGACATCCTTCAGGGATGAACTATGTAGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTGAGATCCCATCCTGACATCCTTCAGGGATGAACTATGTAGAAG  697

seq1  TGTTAAGTCAAATAAACCCTTTCTGCCCTGCTTGCTTTTAGTCATGGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGTCAAATAAACCCTTTCTGCCCTGCTTGCTTTTAGTCATGGAGT  747

seq1  TACATCATAACAATGGATATCCTAACTGATAAAAAGATAAAACGAAACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCATAACAATGGATATCCTAACTGATAAAAAGATAAAACGAAACTG  797

seq1  AAACACTGGAATTGGACAAAAGAAACAAATAGAAGGAGAAGATTTCAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTGGAATTGGACAAAAGAAACAAATAGAAGGAGAAGATTTCAAGA  847

seq1  GAAGGCATAAGAGATAGAGACTCACTTATTCACACCCACTGAAACACTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCATAAGAGATAGAGACTCACTTATTCACACCCACTGAAACACTGA  897

seq1  ACTGGTTAGCCTAAGGGCCTGGTGCAGACCTATGCAGGTTTATGCTTGCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTAGCCTAAGGGCCTGGTGCAGACCTATGCAGGTTTATGCTTGCT  947

seq1  GCCTCAGTCTCTGTGAATTC  970
      ||||||||||||||||||||
seq2  GCCTCAGTCTCTGTGAATTC  967