BAC Information

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BAC

Clone NameB6Ng01-099K15
Chromosome13 (Build37)
Map Location 67,543,773 - 67,592,594
singlet/doubletdoublet
Overlap geneC330011K17Rik, LOC666098, 9630025I21Rik, Zfp817
Upstream geneC330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459
Downstream geneZfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099K15.bB6Ng01-099K15.g
ACCDH909396DH909397
length1,053888
definitionDH909396|Mus musculus domesticus DNA, BAC clone: B6Ng01-099K15, 5' end.DH909397|Mus musculus domesticus DNA, BAC clone: B6Ng01-099K15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,591,541 - 67,592,594)(67,543,773 - 67,544,660)
sequence
gaattcattctgcagagaaatcttacaagtgtgaagaatgtgggaaacca
ttttactgtcctttattgcttaagaagcatcaaataattcattctgcaga
gaaaccctacaagtgtgcagaatgtggcaaagcctttcactacccttcat
tgcttaagcgacatcaaagaattcatgctggaaagaaaccctgtaagtgt
aaagactgcgacagggcattttactcttccgcattccttaagcgtcatca
aagaattcattctgaagagaattcctacaagtgtggagaatgtggcaaaa
ggttttgttcttttccacaccttcaatatcaccaaagatttcattctgga
gagaaaccatacaaatgtgaacaatgtgggaaaacattttctactctctc
ttaccttccttggcataaattgcgtcattctggggagaagtcatacaaat
gtgaaaaatgtgggaaaatgttttactctactttggaccttaaaaaacac
caaaaaattcatgaatataagtgtggggaatgtcactatggctttcctaa
ttatgcagcccttactgcacaccagagagttcatactggagagaaacctc
atgtatgcgaacaatgtgggaaagacttttctaggatcgatagcctcaat
cagcatcagcttgttcatactggagagaaaccctataaatgtgaaaaatg
tggcaagtgcttttaccgatcttcatcccttaaaagacatcaaggaattc
actcttaatagaaaatttgacaagtgatatgtgataaaaaatcttgcaaa
atattcagaccttgcccaagacaaaggaaatcattgagtagagaagccat
atgcctgtgaggaatgctgagtggtttaacatgaagtcaacactttctac
catcaataacgttcattctgcagagaaacttgcccaactgtggaggaagt
gacaggcttttagtgtttcttcaaaccttaaataacaatgatcttcttcc
tgaacattgacgttatcatttgaaggatgtagttgaggcattagtatcat
tca
gaattctttgatgttgcttcagcattgcaggatagtaaaatgaatttcca
cactcttcacacttgtagggtttctctccagtatgaattgcctggtgttt
cctaagatatgagtgatgaagaaaggctttgtcacactcttcacatttgt
atggtttctctccagtatgaattttttgatgatgctgaagatctgaggaa
cggaaaaaccctttgccacatttttcacacttgtaggttttctcatcagt
gtgatatttctggtgtattaaaagtgatgagcgactactaagagttttat
gacattctctacacttgtagggtttgtcgccaataaaatgtccctggagt
acagaaagtgttgcctgagaactaagggccttaccacagtcttcaaagta
gtagggttcctctcctgtatgaattctctggcattgcatacttagagagc
tgtgatcaatggcctcattgtgattgttaaattcattgcctgttgttcct
gttgagcaagagttcatatatgaacaaaatatgagaagtattcatcatac
ttagaatgattatctttagaatagtgatcctcacttatacatatttaacc
ataactgaaaatctagagtatatttcaatagttgtaggcactgaacataa
gtcaaaaaatgtagtaggtgaactaatctattcttctactggaataactg
cagaagtaaatagaacatagacataatgtcatattttttaaagttaaata
gctaagtaagttgtcagatcattttagtaacagcaataagcccagaagat
gtcatcctcaatgctgctggtctcttctaaatcaccgataattcctatct
ccagttaaccgcatctatattcccagtaatgcaaaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67591541_67592594
seq2: B6Ng01-099K15.b_47_1099 (reverse)

seq1  TGAATGATAACTAATGCCTCTACTACATCCTTCAAATGATAACGTCAATG  50
      |||||||| ||||||||||| |||||||||||||||||||||||||||||
seq2  TGAATGAT-ACTAATGCCTCAACTACATCCTTCAAATGATAACGTCAATG  49

seq1  TTCAGGAAGAAGATCATTGTTATTTAAGGTTTGAAGAAACACTAAAAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGAAGAAGATCATTGTTATTTAAGGTTTGAAGAAACACTAAAAGCC  99

seq1  TGTCACTTCCTCCACAGTTGGGCAAGTTTCTCTGCAGAATGAACGTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTTCCTCCACAGTTGGGCAAGTTTCTCTGCAGAATGAACGTTATT  149

seq1  GATGGTAGAAAGTGTTGACTTCATGTTAAACCACTCAGCATTCCTCACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTAGAAAGTGTTGACTTCATGTTAAACCACTCAGCATTCCTCACAG  199

seq1  GCATATGGCTTCTCTACTCAATGATTTCCTTTGTCTTGGGCAAGGTCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGGCTTCTCTACTCAATGATTTCCTTTGTCTTGGGCAAGGTCTGA  249

seq1  ATATTTTGCAAGATTTTTTATCACATATCACTTGTCAAATTTTCTATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTGCAAGATTTTTTATCACATATCACTTGTCAAATTTTCTATTAA  299

seq1  GAGTGAATTCCTTGATGTCTTTTAAGGGATGAAGATCGGTAAAAGCACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAATTCCTTGATGTCTTTTAAGGGATGAAGATCGGTAAAAGCACTT  349

seq1  GCCACATTTTTCACATTTATAGGGTTTCTCTCCAGTATGAACAAGCTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACATTTTTCACATTTATAGGGTTTCTCTCCAGTATGAACAAGCTGAT  399

seq1  GCTGATTGAGGCTATCGATCCTAGAAAAGTCTTTCCCACATTGTTCGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATTGAGGCTATCGATCCTAGAAAAGTCTTTCCCACATTGTTCGCAT  449

seq1  ACATGAGGTTTCTCTCCAGTATGAACTCTCTGGTGTGCAGTAAGGGCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGGTTTCTCTCCAGTATGAACTCTCTGGTGTGCAGTAAGGGCTGC  499

seq1  ATAATTAGGAAAGCCATAGTGACATTCCCCACACTTATATTCATGAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAGGAAAGCCATAGTGACATTCCCCACACTTATATTCATGAATTT  549

seq1  TTTGGTGTTTTTTAAGGTCCAAAGTAGAGTAAAACATTTTCCCACATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGTTTTTTAAGGTCCAAAGTAGAGTAAAACATTTTCCCACATTTT  599

seq1  TCACATTTGTATGACTTCTCCCCAGAATGACGCAATTTATGCCAAGGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTTGTATGACTTCTCCCCAGAATGACGCAATTTATGCCAAGGAAG  649

seq1  GTAAGAGAGAGTAGAAAATGTTTTCCCACATTGTTCACATTTGTATGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGAGAGTAGAAAATGTTTTCCCACATTGTTCACATTTGTATGGTT  699

seq1  TCTCTCCAGAATGAAATCTTTGGTGATATTGAAGGTGTGGAAAAGAACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCAGAATGAAATCTTTGGTGATATTGAAGGTGTGGAAAAGAACAA  749

seq1  AACCTTTTGCCACATTCTCCACACTTGTAGGAATTCTCTTCAGAATGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTTGCCACATTCTCCACACTTGTAGGAATTCTCTTCAGAATGAAT  799

seq1  TCTTTGATGACGCTTAAGGAATGCGGAAGAGTAAAATGCCCTGTCGCAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGATGACGCTTAAGGAATGCGGAAGAGTAAAATGCCCTGTCGCAGT  849

seq1  CTTTACACTTACAGGGTTTCTTTCCAGCATGAATTCTTTGATGTCGCTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACACTTACAGGGTTTCTTTCCAGCATGAATTCTTTGATGTCGCTTA  899

seq1  AGCAATGAAGGGTAGTGAAAGGCTTTGCCACATTCTGCACACTTGTAGGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGAAGGGTAGTGAAAGGCTTTGCCACATTCTGCACACTTGTAGGG  949

seq1  TTTCTCTGCAGAATGAATTATTTGATGCTTCTTAAGCAATAAAGGACAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGCAGAATGAATTATTTGATGCTTCTTAAGCAATAAAGGACAGT  999

seq1  AAAATGGTTTCCCACATTCTTCACACTTGTAAGATTTCTCTGCAGAATGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGTTTCCCACATTCTTCACACTTGTAAGATTTCTCTGCAGAATGA  1049

seq1  ATTC  1054
      ||||
seq2  ATTC  1053

seq1: chr13_67543773_67544660
seq2: B6Ng01-099K15.g_64_951

seq1  GAATTCTTTGATGTTGCTTCAGCATTGCAGGATAGTAAAATGAATTTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGATGTTGCTTCAGCATTGCAGGATAGTAAAATGAATTTCCA  50

seq1  CACTCTTCACACTTGTAGGGTTTCTCTCCAGTATGAATTGCCTGGTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTCACACTTGTAGGGTTTCTCTCCAGTATGAATTGCCTGGTGTTT  100

seq1  CCTAAGATATGAGTGATGAAGAAAGGCTTTGTCACACTCTTCACATTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGATATGAGTGATGAAGAAAGGCTTTGTCACACTCTTCACATTTGT  150

seq1  ATGGTTTCTCTCCAGTATGAATTTTTTGATGATGCTGAAGATCTGAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTCTCTCCAGTATGAATTTTTTGATGATGCTGAAGATCTGAGGAA  200

seq1  CGGAAAAACCCTTTGCCACATTTTTCACACTTGTAGGTTTTCTCATCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAAAACCCTTTGCCACATTTTTCACACTTGTAGGTTTTCTCATCAGT  250

seq1  GTGATATTTCTGGTGTATTAAAAGTGATGAGCGACTACTAAGAGTTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATATTTCTGGTGTATTAAAAGTGATGAGCGACTACTAAGAGTTTTAT  300

seq1  GACATTCTCTACACTTGTAGGGTTTGTCGCCAATAAAATGTCCCTGGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTCTCTACACTTGTAGGGTTTGTCGCCAATAAAATGTCCCTGGAGT  350

seq1  ACAGAAAGTGTTGCCTGAGAACTAAGGGCCTTACCACAGTCTTCAAAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGTGTTGCCTGAGAACTAAGGGCCTTACCACAGTCTTCAAAGTA  400

seq1  GTAGGGTTCCTCTCCTGTATGAATTCTCTGGCATTGCATACTTAGAGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGTTCCTCTCCTGTATGAATTCTCTGGCATTGCATACTTAGAGAGC  450

seq1  TGTGATCAATGGCCTCATTGTGATTGTTAAATTCATTGCCTGTTGTTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCAATGGCCTCATTGTGATTGTTAAATTCATTGCCTGTTGTTCCT  500

seq1  GTTGAGCAAGAGTTCATATATGAACAAAATATGAGAAGTATTCATCATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGCAAGAGTTCATATATGAACAAAATATGAGAAGTATTCATCATAC  550

seq1  TTAGAATGATTATCTTTAGAATAGTGATCCTCACTTATACATATTTAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATGATTATCTTTAGAATAGTGATCCTCACTTATACATATTTAACC  600

seq1  ATAACTGAAAATCTAGAGTATATTTCAATAGTTGTAGGCACTGAACATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGAAAATCTAGAGTATATTTCAATAGTTGTAGGCACTGAACATAA  650

seq1  GTCAAAAAATGTAGTAGGTGAACTAATCTATTCTTCTACTGGAATAACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAAAATGTAGTAGGTGAACTAATCTATTCTTCTACTGGAATAACTG  700

seq1  CAGAAGTAAATAGAACATAGACATAATGTCATATTTTTTAAAGTTAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTAAATAGAACATAGACATAATGTCATATTTTTTAAAGTTAAATA  750

seq1  GCTAAGTAAGTTGTCAGATCATTTTAGTAACAGCAATAAG-CCAGAAGAT  799
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GCTAAGTAAGTTGTCAGATCATTTTAGTAACAGCAATAAGCCCAGAAGAT  800

seq1  GTCA-CCTCAATGCTGCTGGTCTCTTCTTAATCACCGATAATTTCTTATC  848
      |||| ||||||||||||||||||||||| |||||||||||| ||| ||||
seq2  GTCATCCTCAATGCTGCTGGTCTCTTCTAAATCACCGATAA-TTCCTATC  849

seq1  TCCAGCTAACCAGCATCAATAGTCCCAGTAATGCAAAGGT  888
      ||||| ||||| ||||| ||| ||||||||||||||||||
seq2  TCCAGTTAACC-GCATCTATATTCCCAGTAATGCAAAGGT  888