BAC Information

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BAC

Clone NameB6Ng01-099L23
Chromosome13 (Build37)
Map Location 10,854,661 - 10,855,664
singlet/doubletsinglet
Overlap genenone
Upstream geneChrm3, LOC100039604
Downstream geneLOC100039648, Zp4, Ryr2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099L23.bB6Ng01-099L23.g
ACCDH909456DH909457
length1,2191,009
definitionDH909456|Mus musculus domesticus DNA, BAC clone: B6Ng01-099L23, 5' end.DH909457|Mus musculus domesticus DNA, BAC clone: B6Ng01-099L23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgatcgtgagcccactgtcgtacttctctggctgtgaaatga
gttccttggtcagaagcaatactgtgtggaataccatgacgatagataag
gcattctgtcagtccgtgaatggtggttttagcagaggcattacgtgcag
gaaaggcaaatccataaccagaataagtatctactccagtaagaacaaaa
cgctgtcctttccatgaaggaagtggtccaatgtagtcaacctgccacca
ggttgctggctggtcaccccgaggaatggtgccatatctgggactcagtg
ttggtttctgctgttggcagatctggcaatcagcagcagctgtagccagg
tcagctttggtgagtggaagcccgtgttgctgagcccaagcataacctcc
atctcgaccaccatggccactttgttcatgtgcccattgagcaatgacag
ggatggctggggagagaggctgactgtccacagaacgggtcatcttatcc
acttgattattgaactcctcctcggctgaagtcaccttttggtgagcatt
tacatgggacacaaatatcttcacatcctttgcccatttggagagatcta
tccacatacttcttccccagatgtctttctcaccaattttccaattgtga
tctttccaagtgcctgaccatccagccaatccattggctacagcccatga
gtcagtgaataatcgtacatctggccatttcttcttgcaaacaaactgta
ataccatgtgtactgcccgaagttctgcccactgtgaagatttcccttca
cctgtgtctttcagggttgtcccagaaaggggttgtaatgctgcagctgt
ccacttctgggtggtgcctgcataacgtgcagagccatcagtaaaccagg
ctctagtcttctcctcttcggtcagttgatcatagggaacacccatgagg
ctataggcacatgtttggcagcagatggcattgtaacagagtagaaacca
taggcatttgagcaacttcttcatgtaacttgcttggtgcctcaggacct
gctctgcccgatcacgtatataccacttccattgaataaatagactgctg
cctgggcacgtcccactttatgacctggcagatctgaatagataccctag
ctatgatggtagttcagatgcataatactggtgttcaatgtgcacacgtg
tccgtgtctcctcacaatg
gaattcttctcagtggcctctgtgcatgcgtgcgtgtgtgtgtgtgtgtg
tgtgtgttcatgtggggtttttgggagaggacaaaggtgagtgccaactg
actcccaaatcatttctctatcttctcttttgatataaaatcttttaata
aagctgtagttcattgatttagctgggatactgatcagtgatccatggtt
aggcctggtgttcctgcctgcacctccccaaagttgggaaacaatacact
gtcataccctgattaatatttgctgctgaaccctggtgctcttatttcct
aactgggccctctctctagaagtttcaatgatttttttctacatagctca
gatataccttattttttttttaatttttattaggtattttcctcatttac
atttccaatgctatcttaaaagtcccccataacccccccccccccgccgc
aaatctttaaaagaaagaaaaaagaaaaaaatagaacttagctcctaaga
gcagcagccaggtctcttaatcacccctaagctggggctggagagatggc
tcagcagtggagagcactgattgctcttccagaggtcccaggttcaattc
ccagcaactacgtggcagctcacaactgtctgcaattctaagatcttaca
gagacgtacacgcaggcaaaccaccatttttaaaaaaagccaccactaag
ctgtctccccagccccatggggttttgtttgcttttggttttggttttgt
tgttttggagacagggatctctctatgtagctctggctggcgtggaactc
actacatcctagatttgatcagagctcaatttgcctctgccttctttagg
actgggaattacaggcctgcctgccttttggggcatagtctgtgggcctt
gaagtagtctgggtagatgttcttagtgctaggaaaagaagttgcttctc
ttctgcctctcttaaagtatggccaaatgctggagatagaacaattctga
gaaagttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_10854661_10855664
seq2: B6Ng01-099L23.g_66_1074

seq1  GAATTCTTCTCAGTGGCCTCTGTGCATGCGTGCGTGTGTGTGTGTGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTCAGTGGCCTCTGTGCATGCGTGCGTGTGTGTGTGTGTGTG  50

seq1  TGTGTGTTCATGTGGGGTTTTTGGGAGAGGACAAAGGTGAGTGCCAACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTCATGTGGGGTTTTTGGGAGAGGACAAAGGTGAGTGCCAACTG  100

seq1  ACTCCCAAATCATTTCTCTATCTTCTCTTTTGATATAAAATCTTTTAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCAAATCATTTCTCTATCTTCTCTTTTGATATAAAATCTTTTAATA  150

seq1  AAGCTGTAGTTCATTGATTTAGCTGGGATACTGATCAGTGATCCATGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTAGTTCATTGATTTAGCTGGGATACTGATCAGTGATCCATGGTT  200

seq1  AGGCCTGGTGTTCCTGCCTGCACCTCCCCAAAGTTGGGAAACAATACACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGGTGTTCCTGCCTGCACCTCCCCAAAGTTGGGAAACAATACACT  250

seq1  GTCATACCCTGATTAATATTTGCTGCTGAACCCTGGTGCTCTTATTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATACCCTGATTAATATTTGCTGCTGAACCCTGGTGCTCTTATTTCCT  300

seq1  AACTGGGCCCTCTCTCTAGAAGTTTCAATGATTTTTTTCTACATAGCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGGCCCTCTCTCTAGAAGTTTCAATGATTTTTTTCTACATAGCTCA  350

seq1  GATATACCTTATTTTTTTTTTAATTTTTATTAGGTATTTTCCTCATTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACCTTATTTTTTTTTTAATTTTTATTAGGTATTTTCCTCATTTAC  400

seq1  ATTTCCAATGCTATCTTAAAAGTCCCCCATAACCCCCCCCCCCCCGCCGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAATGCTATCTTAAAAGTCCCCCATAACCCCCCCCCCCCCGCCGC  450

seq1  AAATCTTTAAAAGAAAGAAAAAAGAAAAAAATAGAACTTAGCTCCTAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTAAAAGAAAGAAAAAAGAAAAAAATAGAACTTAGCTCCTAAGA  500

seq1  GCAGCAGCCAGGTCTCTTAATCACCCCTAAGCTGGGGCTGGAGAGATGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGCCAGGTCTCTTAATCACCCCTAAGCTGGGGCTGGAGAGATGGC  550

seq1  TCAGCAGTGGAGAGCACTGATTGCTCTTCCAGAGGTCCCAGGTTCAATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGTGGAGAGCACTGATTGCTCTTCCAGAGGTCCCAGGTTCAATTC  600

seq1  CCAGCAACTACGTGGCAGCTCACAACTGTCTGCAATTCTAAGATCTTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAACTACGTGGCAGCTCACAACTGTCTGCAATTCTAAGATCTTACA  650

seq1  GAGACGTACACGCAGGCAAACCACCA-TTTTAAAAAAAGCCACCACTAAG  699
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GAGACGTACACGCAGGCAAACCACCATTTTTAAAAAAAGCCACCACTAAG  700

seq1  CTGTCTCCCCAGCCCCATGGTGTTTTGTTTGCTTTTGGTTTTGGTTTTGT  749
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTGTCTCCCCAGCCCCATGGGGTTTTGTTTGCTTTTGGTTTTGGTTTTGT  750

seq1  TGTTTTGGAGACA-GGATCTCTCTATGTAGCTCTGGCTGGCGTGGAACTC  798
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGGAGACAGGGATCTCTCTATGTAGCTCTGGCTGGCGTGGAACTC  800

seq1  ACTACATCCTAGATTTGATCAGAGCTCAATTTGCCTCTG-CTTCCTTAGT  847
      ||||||||||||||||||||||||||||||||||||||| |||| |||| 
seq2  ACTACATCCTAGATTTGATCAGAGCTCAATTTGCCTCTGCCTTCTTTAGG  850

seq1  ACTGGG-ATTACAGGCCTGCCTGCCTTT--GGGCATAGTCTGT-GGCCTT  893
      |||||| |||||||||||||||||||||  ||||||||||||| ||||||
seq2  ACTGGGAATTACAGGCCTGCCTGCCTTTTGGGGCATAGTCTGTGGGCCTT  900

seq1  GAAGTAGTCTGGGTAGATGTTCTTAGTGGCTAGGACAAGAAGTTTGCTTC  943
      ||||||||||||||||||||||||||| ||||||| |||||| |||||||
seq2  GAAGTAGTCTGGGTAGATGTTCTTAGT-GCTAGGAAAAGAAG-TTGCTTC  948

seq1  CTCCTTCTGCTCTC-CTTAGAGTATTGCCAAATGCTGGAGATAGGAC-AT  991
         ||||||| ||| |||| ||||| |||||||||||||||||| || ||
seq2  --TCTTCTGC-CTCTCTTAAAGTATGGCCAAATGCTGGAGATAGAACAAT  995

seq1  TCTGAG-AAGTTCT  1004
      |||||| |||||||
seq2  TCTGAGAAAGTTCT  1009