BAC Information

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BAC

Clone NameB6Ng01-099N06
Chromosome13 (Build37)
Map Location 12,985,513 - 12,986,677
singlet/doubletsinglet
Overlap genenone
Upstream geneRyr2, LOC100039678, Mtr, LOC100039826, Actn2, EG432725, Heatr1, LOC546246, Lgals8, LOC100039900, Edaradd, Ero1lb, LOC664862, EG238507, LOC100039744, EG630757, Prl2c3, LOC100039999
Downstream geneLOC100039754, Prl2c2, LOC434483, LOC674723, Prl2c5, LOC630611, LOC100039786, LOC385049, LOC630663, LOC100040108, Gpr137b, LOC664960, Nid1, Lyst, LOC100039831, Gng4, EG665000, EG665008
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099N06.bB6Ng01-099N06.g
ACCDH909512DH909513
length1,133201
definitionDH909512|Mus musculus domesticus DNA, BAC clone: B6Ng01-099N06, 5' end.DH909513|Mus musculus domesticus DNA, BAC clone: B6Ng01-099N06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttactgttacagagggtgaggccatgtccattataccacagaa
tatggtcaaaagcaggcttagtgctggagtagtagctgagagattacatc
ttgattcacagtttacaataaaaaagataaagtgtgccagctgtttgttt
tgaaatatcaaagcccacgtctactgacacacattcttcaccaaaccaca
ctccctaattctttgcaaaatagtctaccaacttggggccacatattcaa
atatatgagcatatggggccaatcttagaacaaccacactcctcttcaga
ttgtaaaccaaaacctgctctacaaagtacatcacatcccctgaggacat
tacccacctcatttcttggttagagaggctaaacttctgcagtcaactgc
atctactccaccttgtaccactcattcccactctacagtcctgcttccat
ctctaggcagaaacagaatacacatgctgccaatcactgtaacacatttc
aaacattcactcaacaatacagagatgagagtttcataccaagaaacact
gcaatgacctgactctaaatacctaggacccatcacaaagaaaattgcac
cgccaaaacatttgaccactcaaaattagtactcctgctgggtgataaaa
tatttcattcccaagatatattaccttaaaaaaacatccaatttcaagaa
aaaattttatattttaaatgacagcttgatcaaaatattgtgatagtggg
tgatttcaatgcacccttctcaccaataaatagatcatctcagaaaactt
aaattccgaaacttcgaaattcaatgttgtcatagatacagtgtacctaa
gagaacgttccacccaaacacctcttctgagatgtctacagaatgttatg
caaaaccaacggcatattaggacaaaaacaactcatagaaagtataggtc
aattgaaatcacactcttgattctctttgacaccatggaaaaatggatct
agacaataggatgacaataacaactcatgtgagctaaacatataatagca
atcaaatttggtgagaaacagagaaaatagattttgatgatgaaatgcaa
tgtgaactataaatctatgggaataatgaaata
tatcaaacactagatcaccaaacaggcagcatacaccaggtaatatgagg
tccccaacacatatacagtagaggactaccaggtcttggttcagtcagat
tagatgcacctatccctcaagatactggaggccacagggagtttagaggt
catttgggtttgggggtgtggacacactggtggagaggagttatgggttg
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_12985513_12986677
seq2: B6Ng01-099N06.b_49_1181

seq1  GAATTCTTTACTGTTACAGAGGGTGAGGCCATGTCCATTATACCACAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTACTGTTACAGAGGGTGAGGCCATGTCCATTATACCACAGAA  50

seq1  TATGGTCAAAAGCAGGCTTAGTGCTGGAGTAGTAGCTGAGAGATTACATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTCAAAAGCAGGCTTAGTGCTGGAGTAGTAGCTGAGAGATTACATC  100

seq1  TTGATTCACAGTTTACAATAAAAAAGATAAAGTGTGCCAGCTGTTTGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTCACAGTTTACAATAAAAAAGATAAAGTGTGCCAGCTGTTTGTTT  150

seq1  TGAAATATCAAAGCCCACGTCTACTGACACACATTCTTCACCAAACCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATATCAAAGCCCACGTCTACTGACACACATTCTTCACCAAACCACA  200

seq1  CTCCCTAATTCTTTGCAAAATAGTCTACCAACTTGGGGCCACATATTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTAATTCTTTGCAAAATAGTCTACCAACTTGGGGCCACATATTCAA  250

seq1  ATATATGAGCATATGGGGCCAATCTTAGAACAACCACACTCCTCTTCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGAGCATATGGGGCCAATCTTAGAACAACCACACTCCTCTTCAGA  300

seq1  TTGTAAACCAAAACCTGCTCTACAAAGTACATCACATCCCCTGAGGACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAACCAAAACCTGCTCTACAAAGTACATCACATCCCCTGAGGACAT  350

seq1  TACCCACCTCATTTCTTGGTTAGAGAGGCTAAACTTCTGCAGTCAACTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACCTCATTTCTTGGTTAGAGAGGCTAAACTTCTGCAGTCAACTGC  400

seq1  ATCTACTCCACCTTGTACCACTCATTCCCACTCTACAGTCCTGCTTCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTCCACCTTGTACCACTCATTCCCACTCTACAGTCCTGCTTCCAT  450

seq1  CTCTAGGCAGAAACAGAATACACATGCTGCCAATCACTGTAACACATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGCAGAAACAGAATACACATGCTGCCAATCACTGTAACACATTTC  500

seq1  AAACATTCACTCAACAATACAGAGATGAGAGTTTCATACCAAGAAACACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTCACTCAACAATACAGAGATGAGAGTTTCATACCAAGAAACACT  550

seq1  GCAATGACCTGACTCTAAATACCTAGGACCCATCACAAAGAAAATTGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGACCTGACTCTAAATACCTAGGACCCATCACAAAGAAAATTGCAC  600

seq1  CGCCAAAACATTTGACCACTCAAAATTAGTACTCCTGCTGGGTGATAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCAAAACATTTGACCACTCAAAATTAGTACTCCTGCTGGGTGATAAAA  650

seq1  TATTTCATTCCCAAGATATATTACCTTAAAAAAACATCCAATTTCAAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCATTCCCAAGATATATTACCTTAAAAAAACATCCAATTTCAAGAA  700

seq1  AAAATTTTATATTTTAAATGACAGCTTGATCAAAATATTGTGATAGTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTATATTTTAAATGACAGCTTGATCAAAATATTGTGATAGTGGG  750

seq1  TGATTTCAATGCACCCTTCTCACCAATAAATAGATCATCTCAGAAAACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCAATGCACCCTTCTCACCAATAAATAGATCATCTCAGAAAACTT  800

seq1  AAATTCCGAAACTTCGAAATTCAATGTTGTCATAGATACAGTGTACCTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCGAAACTTCGAAATTCAATGTTGTCATAGATACAGTGTACCTAA  850

seq1  GAGAACGTTCCACCCAAACACCTCTTCTGAGATGTCTACAGAATGTTATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACGTTCCACCCAAACACCTCTTCTGAGATGTCTACAGAATGTTATG  900

seq1  CAAAACCAACGGCATATTAGGACAAAAAACAACTCATAGAAAGTATAGGT  950
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CAAAACCAACGGCATATTAGGAC-AAAAACAACTCATAGAAAGTATAGGT  949

seq1  CAATTGAAATCACACTCTTGATTCTCTTTGACAACCATGGAAAAAAATGG  1000
      |||||||||||||||||||||||||||||||| |||||||  ||||||||
seq2  CAATTGAAATCACACTCTTGATTCTCTTTGAC-ACCATGG--AAAAATGG  996

seq1  ATCTAGACAAATAGGAATGACAAAAATTAAACAAACTCATGTGAGCTAAA  1050
      |||||||| |||||| ||||||| ||       |||||||||||||||||
seq2  ATCTAGAC-AATAGG-ATGACAATAA------CAACTCATGTGAGCTAAA  1038

seq1  CAATATAATAGCAAATCAAAATTTGGTGAGGAAAACAAGGAGAAAATTTA  1100
      | |||||||||| |||| ||||||||||||  |||||  |||||||  ||
seq2  C-ATATAATAGC-AATC-AAATTTGGTGAG--AAACA--GAGAAAA--TA  1079

seq1  GAATTTTTAGATTGAATGAAAATGCAAATGTGACATATAAAATCTATGGG  1150
      ||   ||| |||   ||| |||||| |||||||  ||| |||||||||||
seq2  GA---TTTTGAT--GATG-AAATGC-AATGTGAACTAT-AAATCTATGGG  1121

seq1  ACATAATATGAAATA  1165
      | |||  ||||||||
seq2  A-ATA--ATGAAATA  1133