BAC Information

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BAC

Clone NameB6Ng01-099P13
Chromosome13 (Build37)
Map Location 66,009,578 - 66,009,778
singlet/doubletsinglet
Overlap genenone
Upstream geneEG432767, 4930458L03Rik, LOC218301, LOC628515, 4932441B19Rik, Gm274, Hiatl1, LOC100042311, Olfr465-ps1, Olfr466, Nlrp4f, ENSMUSG00000074847, Zfp369, LOC100042347, LOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777, EG628648, LOC665809, LOC100042404, LOC628722, LOC665851, Vmn2r-ps99, LOC628794
Downstream geneEG665897, LOC100041855, EG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099P13.bB6Ng01-099P13.g
ACCDH909612DH909613
length1,0191,214
definitionDH909612|Mus musculus domesticus DNA, BAC clone: B6Ng01-099P13, 5' end.DH909613|Mus musculus domesticus DNA, BAC clone: B6Ng01-099P13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgatgaattctcagtttgcccttttcagtaaaggatttgtca
cattcagtgcatttgtaaggtttctctcctgtatgaattctctgatgaat
cctcagactgcctttgaaagtaaagcatttgtcacattcagtgcatttgt
aaggtttctctcctgtatgaattctctgatgaattctcaaacagccattt
tcagtaaaggatttgtcacattcactacatttgtagggtttctctcctgt
atgaattctctgatgaatcctcagactgcctttgaaagtaaagcatttgt
cacattcagtgcatttgtaaggtttctctcctgtatgaattctctgatga
atcctcaaactgaattttttagtaaagcatttgtcacattcactgcattt
gtaaggtttctctcctgtatgaattctctgatgaattctcagatggccat
tttcagtaaaggatttgtcacattgactacatttgtaaggtttctcacct
gtatgatttctctgatgaattctcagatggccattttcagtaaaggattt
gtcacattgactacatttgtaaggtttctctcctgtatgaattctctgat
gaatattaagatgggatttttgggtaaagcatttgtcacattcactgcat
ttgtaaggtttatctcctgtatgaatcctctgatgaattctcagattgcc
tttttcagtaaagcatttctcacatacaatgcatttgtaaggtttctctc
ctgtatgaattctctgatgaatattaagatgagatttttgggtaaagcat
ttgtcacattcactacatttgtaaggtttctctcctgtatgaattctctg
atgaatattaagatgaaatttgtgggtaaagcatttgtcacattcactac
atttataaattttctcttctgcatgaattccctgatggatactaagatcg
atctgatgggtaaagcatttgtcactttactacttctgtaacgtttcttt
tcatgataaattctctgct
gaattcatacaggagagaaaccgtaccaatgcagtgagtgtgacaaatgc
tttactgacaaaggcagtcttagagttcatcatagaattcatgcaggaga
gaaaccttacaaatgtagtgaatgcgacaaatgctttactgacaaaggct
atctgagagttcatcatagaattcatgcaggagagaaaccttacaaatgt
agtgaatgtgacaaatgctttactcacaaaggctctctgagagttcatca
tagaattcatgcaggagagaaaccttacaaatgtagtgaatgtgacaaat
gttttactgagaaaaacagtctgagaaggcatcagagaattcatacagga
gagaaaccttataaatgcagtgaatgtgacaaatgctttacccgaaaatc
acatcttagtattcatcagagaattcatacaggagagaaactgtacaaat
gcagtgaatgtgacaaatgctttacccaacaatgccatcttagtattcat
cagaaaattcattcaggagagaaccttacaaatgcaatgaatgcgacaaa
tgctttagtgacaaacacagtctgagaaggcatcagagaattcatacagg
agagacaccttacaaatgtaatgaatgtgacaaatgctttacctgaaaat
cacatcttagtattcatcagataattcatacaggagagaaaccttacaaa
tgtaatgaatgtgacaaatcctttactgaaaatggctgtctgagaattca
tcagagaattcatacaggagagaaaccttacaaatgtaatgaatgtgaca
aatgctttacctgaaaatcacatcttagtattcatcagataattcataca
gaagagaaacctttacaaatgtagtgaatgtgacaaatcctttactgaaa
atggctgtctgagaattcatcagagaattcatacaggagagaaaccttac
aaatgtagtgaatgttgacaaatgctttactaaaaaatccagtttgagga
ttcatcagagatttcatacaggagagaatcttacatgtagtgaatgtgac
aatgttttattcaaatgcagttgatattcatcgagatcattaggaagaac
ttacacgtagtgattgtgacaagctttacttgagagtcatcttgaaggct
cgagactatacgggaatcttacaatgtatggaatggtcgacacgttttgt
ctgcagaaatctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_66009578_66009778
seq2: B6Ng01-099P13.b_97_213 (reverse)

seq1  CAGGAGAGAAACCTTATGAATGTAATTGATATGAGAAAACATTTACATAT  50
      ||||||||||||||||  |||| | |  || ||| |||   |||||    
seq2  CAGGAGAGAAACCTTACAAATGCACTGAATGTGACAAATGCTTTAC----  46

seq1  CACAGTCATTTCCAAGTACATAAATGAGCACATAGT-TGAGAGAAGCCCT  99
              |||| |||           ||    ||| ||||         
seq2  --------TTTCAAAG-----------GC----AGTCTGAG---------  64

seq1  GTGATCGTAATAAAAGTGTTAAAGCCTTTGCGTGTCACTGTACTCTCCAA  149
        |||  | || | ||                                 |
seq2  --GAT--TCATCAGAG---------------------------------A  77

seq1  ATACTTAAAGGAACACACGTTTTAGAGAAACCTTACAAATGCAATGAATG  199
      || | || |||            |||||||||||||||||||| ||||||
seq2  ATTCATACAGG------------AGAGAAACCTTACAAATGCACTGAATG  115

seq1  TG  201
      ||
seq2  TG  117