BAC Information

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BAC

Clone NameB6Ng01-100B12
Chromosome13 (Build37)
Map Location 17,431,519 - 17,432,662
singlet/doubletsinglet
Overlap gene5033411D12Rik
Upstream geneLOC665191
Downstream gene2810021B07Rik, Cdc2l5, Rala, LOC434585, LOC382732, 1600012F09Rik, Vdac3-ps1, LOC625310, 4930448F12Rik, Pou6f2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100B12.bB6Ng01-100B12.g
ACCDH909694DH909695
length1,2481,130
definitionDH909694|Mus musculus domesticus DNA, BAC clone: B6Ng01-100B12, 5' end.DH909695|Mus musculus domesticus DNA, BAC clone: B6Ng01-100B12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaccttcttttcagtacttcaggttaccttctcggaaattgacca
tataattggtcccaaaacaatcctcaactgacacaagaagattgaaataa
taccatcctatcagatcaccatgacctaaggcttgtcttcaataacagca
aaatttacagaaagcccacatagacatggaaagtgaacaactcttcactc
aatgataacttggtcagggaagaaataaagaaagagattaaaaactttct
gggatttaatgaaaatgtggacacatcatacccaaacataaattcatagc
actaagagccctgataagatcttacacttacaacttaaccaacacacctg
agagttcttgaacaaaaagaagcaaacttacccaagaggattagaaggca
ggatatagtcaaactcagggcagaaatcaaccaaatagaaacaaagaaaa
caatacgcagaatcaagaaaaccaaaagctggttctttgaatcaacaaaa
tagataaaaccctagccaaactaattaaagggttgagagccagtatccaa
attaacaaaatgaaagtgagacaaaacaacagaaacagaagaaattcaga
aaaaaccatatcatactaacctcaacaaaatggaaaatctagataaaatg
gatagttttctagacagatacaacataccaaagttaaatcaagagcaggt
atactatctaaacaggcccatatagcacaaggaaatagaagaatttattt
aaaatctgacaatcaaaacaaggccagggccagatggatttagtgcagaa
ttctaccagaccttcaaagaagacctgataccaattttcctcaaactatt
tcataaaatagaaagtggacgaacactacctaactcattctatgaagcca
caattactctgatacctaaaccactcaaggacaacccccccctccccaag
aaaaagaacttcagatcatctcgcttatgaatatcaatgcaaaatactca
ataaaattcttgcaaactgatccagacatcaaccatcattcatcatgatc
agtagatcatccagggatgcaaagttggttaattaagaatcattattgta
tccctacatataaactcaagaaaaaatcaatgatcttcttttaagatgcc
gaaaaatcattggacaaaatcacacctctctagttaggattgggagagat
cggattcaggtctactctcatagcacatgaagccagtttactgtcagc
gaattctccatgtgcagctgcttcctaacctggtcaggtttcagagatgc
caaagcttccagcacagatttgtcagaaatgtaaaaatccaaggaatata
gctcttgctgacccttgaagaaggagttggattgagaaaatgggaaaaat
ttcccaggctgttcctctcaggttgcctgtacctccctctgtacagctct
ctcctctggggtatccttccctttctataatgtcacacaaatcaggcaca
gaatcgctttataacctactttgtcacaaaacttcagctcttacgtcagc
tgttgtttccggaagcccacctagggcatgcactaaatgccaagtacact
cctggaatgcaccaggtactggccctgcctctccataccagcaatatgaa
agtttctcttagatgggaacgttaagttggaatacaatcacagttatgtc
acaccagtaaaaatgttatactctgtgataattttagagataaggcctac
taaatgcagcgtgcacatttatctaaggagactattaggctagatagggt
tattagaataacttgacacctttggacactgcagctctgtaccttgtaga
acaatacagaagctattttttatttcatggcccagcatacactgtatctt
ttttcatccttttgatgcaatcagaaaaaaaaaaaatctcttccaggtca
tttactgagtgtattattaaaatgcttaaagctcctgaatatgattaata
atggctgaaataccacaaaattgtttttagaattgtagacagacctattt
cttgttgcctcagagtgtcatgctaaacctttgaagagcattttttttgt
tttcttaattattgcttaatacttgtttttactgtagtaagttcaaaaca
acaccaacaacaaaccttaatgttgtgttgtaaaaccatgtgtaagtcat
aggaataaaattgctgttttacatattgcaaacatttcagtatttaaatt
tgagttgctaatatcaaaattttttttactgattgttgaggtatttaaat
atgcatgccttgtttctgggaaacaaaatgattccattaagtgatagatc
ataacaatcctcttgcctttgatatttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_17431519_17432662
seq2: B6Ng01-100B12.g_70_1199

seq1  GAATTCTCCATGTGCAGCTGCTTCCTAACCTGGTCAGGTTTCAGAGATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATGTGCAGCTGCTTCCTAACCTGGTCAGGTTTCAGAGATGC  50

seq1  CAAAGCTTCCAGCACAGATTTGTCAGAAATGTAAAAATCCAAGGAATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTTCCAGCACAGATTTGTCAGAAATGTAAAAATCCAAGGAATATA  100

seq1  GCTCTTGCTGACCCTTGAAGAAGGAGTTGGATTGAGAAAATGGGAAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGCTGACCCTTGAAGAAGGAGTTGGATTGAGAAAATGGGAAAAAT  150

seq1  TTCCCAGGCTGTTCCTCTCAGGTTGCCTGTACCTCCCTCTGTACAGCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGGCTGTTCCTCTCAGGTTGCCTGTACCTCCCTCTGTACAGCTCT  200

seq1  CTCCTCTGGGGTATCCTTCCCTTTCTATAATGTCACACAAATCAGGCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTGGGGTATCCTTCCCTTTCTATAATGTCACACAAATCAGGCACA  250

seq1  GAATCGCTTTATAACCTACTTTGTCACAAAACTTCAGCTCTTACGTCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCGCTTTATAACCTACTTTGTCACAAAACTTCAGCTCTTACGTCAGC  300

seq1  TGTTGTTTCCGGAAGCCCACCTAGGGCATGCACTAAATGCCAAGTACACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTTCCGGAAGCCCACCTAGGGCATGCACTAAATGCCAAGTACACT  350

seq1  CCTGGAATGCACCAGGTACTGGCCCTGCCTCTCCATACCAGCAATATGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAATGCACCAGGTACTGGCCCTGCCTCTCCATACCAGCAATATGAA  400

seq1  AGTTTCTCTTAGATGGGAACGTTAAGTTGGAATACAATCACAGTTATGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTCTTAGATGGGAACGTTAAGTTGGAATACAATCACAGTTATGTC  450

seq1  ACACCAGTAAAAATGTTATACTCTGTGATAATTTTAGAGATAAGGCCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAGTAAAAATGTTATACTCTGTGATAATTTTAGAGATAAGGCCTAC  500

seq1  TAAATGCAGCGTGCACATTTATCTAAGGAGACTATTAGGCTAGATAGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCAGCGTGCACATTTATCTAAGGAGACTATTAGGCTAGATAGGGT  550

seq1  TATTAGAATAACTTGACACCTTTGGACACTGCAGCTCTGTACCTTGTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGAATAACTTGACACCTTTGGACACTGCAGCTCTGTACCTTGTAGA  600

seq1  ACAATACAGAAGCTATTTTTTATTTCATGGCCCAGCATACACTGTATCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATACAGAAGCTATTTTTTATTTCATGGCCCAGCATACACTGTATCTT  650

seq1  TTTTCATCCTTTTGATGCAATCAG-AAAAAAAAAAATCTCTTCCAGGTCA  699
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTTTCATCCTTTTGATGCAATCAGAAAAAAAAAAAATCTCTTCCAGGTCA  700

seq1  TTTACTGAGTGTATTATTAAAATGCTTAAAGCTCCTGAATATGATTAATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGAGTGTATTATTAAAATGCTTAAAGCTCCTGAATATGATTAATA  750

seq1  ATGGCTGAAATACCACAAAATTGTTTTTAGAATTGTAGACAGACCTATTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGAAATACCACAAAATTGTTTTTAGAATTGTAGACAGACCTATTT  800

seq1  CTTGTTGCCTCAGAGTGTCATGCTAAACCTTTGAAGAGCATTTTTTTTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTGCCTCAGAGTGTCATGCTAAACCTTTGAAGAGCATTTTTTTTGT  850

seq1  TTTCTTAATTATTGCTTAATACTTGTTTTTACTGTAGTAAGTTCAAAACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTAATTATTGCTTAATACTTGTTTTTACTGTAGTAAGTTCAAAACA  900

seq1  ACACCAACAACAAACCTTAATGTTGTGTTGTAAAACCATGTGTTAAGTCA  949
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACACCAACAACAAACCTTAATGTTGTGTTGTAAAACCATGTG-TAAGTCA  949

seq1  TAGGAATAAAATTGCTGTTTTACATATTGCAAACATTTCAGTAATTTTAA  999
      |||||||||||||||||||||||||||||||||||||||||||  |||||
seq2  TAGGAATAAAATTGCTGTTTTACATATTGCAAACATTTCAGTA--TTTAA  997

seq1  ATTTTGAAGTTGCTAATATCAAAATTTTTTTTACTTGTTTGTTGAAAGTA  1049
      ||||   ||||||||||||||||||||||||||| || |||||| | |||
seq2  ATTT--GAGTTGCTAATATCAAAATTTTTTTTAC-TGATTGTTG-AGGTA  1043

seq1  TTTAAATATGCATGCC-TGTTTCTGGAAACCAAAAATGGTATTTCATTAA  1098
      |||||||||||||||| ||||||||| || | ||||||  ||| ||||||
seq2  TTTAAATATGCATGCCTTGTTTCTGGGAAAC-AAAATG--ATTCCATTAA  1090

seq1  GTGATAAGATCCAATAACTAATCCTTCTTGCTTTTGTATATTTTTT  1144
      ||||| |||||  ||||| ||||| |||||| |||| |||||||||
seq2  GTGAT-AGATC--ATAAC-AATCC-TCTTGCCTTTG-ATATTTTTT  1130