BAC Information

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BAC

Clone NameB6Ng01-100B15
Chromosome13 (Build37)
Map Location 84,415,932 - 84,416,961
singlet/doubletsinglet
Overlap geneTmem161b
Upstream geneMef2c, LOC100043111, LOC623241, LOC432789, 2810049E08Rik, LOC100043119, LOC667081, LOC667101
Downstream geneLOC666795, LOC667111, LOC382786, LOC100042841, LOC100042851, LOC100042857, LOC100042862, Ccnh, Rasa1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100B15.bB6Ng01-100B15.g
ACCDH909700DH909701
length1,2361,072
definitionDH909700|Mus musculus domesticus DNA, BAC clone: B6Ng01-100B15, 5' end.DH909701|Mus musculus domesticus DNA, BAC clone: B6Ng01-100B15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatagaatagaattgaagacccagaaatgaacccatacacctgt
ggtcacttgatctttgacaaaggaactaaaaccatccggtggaaaaaaga
cagcatttcagcaaatgtttctgggtcaattggcagtaaatatgtagaag
aatgtaaattgatccattctcatctccctgtacacagctcaagtccaagt
ggatcaagaatctccacataaaaccagttacactgaatctaatagaagag
aaagtgggggaacagcctcgaacacatgggcacagggaaaaattcctgaa
tgaaacaccaatggcttatgccctagatcaagaatcaacaaatgggacct
cataaaattataaagcttctgtaaggcaaagaacactgtcaatagaaata
aatagcaaccaacaggttgggaaaagacctttaccaattcttcatcagat
agagggctaatatccaatatatacaaagaactcaagaagttagactccag
agaaccaaataaccctattaaaaatggggaacagagctaaacagaattct
caaatgaggagactcgaatggccaagaagcacctaaagaaatgttccaac
atcctttgtcatcatggaaatgcaaatcaaaacaaccctgaaattcaacc
tcacaccagtcagaatggctaacatcataaactcaggtgactgcagatgt
ggagagagaggaacactcttccattgctggtgggattgcaagctggtaca
accactctggaaatcattctggtggttcctcagaaaattggacatagtac
tacctgaggacgcagcaattccactcctgggcatatacctagaagatgct
ctaaaatgtaatcaggacacatgctcctctatattcatagcagccatatt
tataacagctagaagctggaaacaactcagatgtcccttacagaggaatg
gacttcagaaaatgtggtacatttacacaatggaatactactcagctgtt
aaaaacatgacctcataaattcaaagcaatagatagaactagacaatatc
atcctgagtgagtacccattacaaagaagactcacagtttgcactcattg
atagtcgatacagttaagttgcatatctaattatacaattcagatcaatg
agctcagagagtggaagacaaatgggtgttaagctctttgagttctcaaa
tctccatagagagaaatttgaaagacatcagatcga
gaattccttacatactgttggtggagtgtaaactagtggaaatgagttct
gaataaaactgcttaagacccagctatactactcctgagccacattcaaa
ggacttcatactctacctcagagacactcagacagccatgttttgggctc
ctctcttcacaagaggaagaacatgaagcagctaggatatcccaacagat
gaatacataagaaaaacatacacacaatacggtgcggttctttgttcagg
caaagaacaaaaaaacaaagaaatggatagaactgaaaaactggtacttc
aggccccaagttccctcctatatttatatcctagttgcaaacttttgttt
tgtgtatttaatttggaagacaagttgaagccaggaaattaaaagggaga
tatggggaggtgcgttaaaggggaggagaaaataaattataggtaaaaag
aaagtagaaagtggaaaactgggggtggagaggcttatgcaggaagaggc
atataaggaagagtgtgggaaaaccaatggaagcctaataggacccatgg
gatacaaaagaaaggagattgggatgggcttaatgaattaagtggaggtg
tggataggagaaatagcaagaggaaagaaaatagcaagcaggttaatcaa
aactaaggatgtatgaaaaagttattatggaaactgactagtttagcaag
ctaatttcaaaatggtagtttgagcagaaggaccccacatagatggataa
tgccactcccagaagtcacaggttattaaataaaagtcaaagtgcgaggc
acgggatgcctccccatgagttattagttagagaagcccaagagatatca
aaactatcacaagctattgtcattgcacttggcgacgcatcttagctacg
tattgctgaaacaccacagacttgggctacaggacataaattaatctcac
acaaacaggaacttcctgataactaagcctcaaggtgctagaagagatca
tgcctcctacttaactggatttctataactgaaatttgttccacatggag
agatgaaattacttatttaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_84415932_84416961
seq2: B6Ng01-100B15.g_118_1140 (reverse)

seq1  TTTTAAATAAGT-ATATCATCTCTCCATGGTGGAACAAATTTCAGTTTAT  49
      |||||||||||| || |||||||||||| |||||||||||||||| ||||
seq2  TTTTAAATAAGTAATTTCATCTCTCCAT-GTGGAACAAATTTCAG-TTAT  48

seq1  AGGAAATTCAGTTTAAGTAGGA-GCATGATCTCTTTCTAGCACCTTGAAG  98
      | ||||| ||| |||||||||| |||||||||| ||||||||||||| ||
seq2  A-GAAATCCAG-TTAAGTAGGAGGCATGATCTC-TTCTAGCACCTTG-AG  94

seq1  GCTTAGTTATCAGGAAGTTTCCTGTTTGGTGTGAGATTAATTTATGTCCT  148
      ||||||||||||||||| ||||||||| ||||||||||||||||||||||
seq2  GCTTAGTTATCAGGAAG-TTCCTGTTT-GTGTGAGATTAATTTATGTCCT  142

seq1  GTAGCCCAAGTCTGTGGTGTTTTCAGCAATACGTAGCTATGATGCGTCGC  198
      ||||||||||||||||||| ||||||||||||||||||| ||||||||||
seq2  GTAGCCCAAGTCTGTGGTG-TTTCAGCAATACGTAGCTAAGATGCGTCGC  191

seq1  CAAGTGCAATGACAATAGCTTGTGATAGTTTTGATATCTCTTGGGCTTCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCAATGACAATAGCTTGTGATAGTTTTGATATCTCTTGGGCTTCT  241

seq1  CTAACTAATAACTCATGGGGAGGCATCCCGTGCCTCGCACTTTGACTTTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTAATAACTCATGGGGAGGCATCCCGTGCCTCGCACTTTGACTTTT  291

seq1  ATTTAATAACCTGTGACTTCTGGGAGTGGCATTATCCATCTATGTGGGGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATAACCTGTGACTTCTGGGAGTGGCATTATCCATCTATGTGGGGT  341

seq1  CCTTCTGCTCAAACTACCATTTTGAAATTAGCTTGCTAAACTAGTCAGTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGCTCAAACTACCATTTTGAAATTAGCTTGCTAAACTAGTCAGTT  391

seq1  TCCATAATAACTTTTTCATACATCCTTAGTTTTGATTAACCTGCTTGCTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAATAACTTTTTCATACATCCTTAGTTTTGATTAACCTGCTTGCTA  441

seq1  TTTTCTTTCCTCTTGCTATTTCTCCTATCCACACCTCCACTTAATTCATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCCTCTTGCTATTTCTCCTATCCACACCTCCACTTAATTCATT  491

seq1  AAGCCCATCCCAATCTCCTTTCTTTTGTATCCCATGGGTCCTATTAGGCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCATCCCAATCTCCTTTCTTTTGTATCCCATGGGTCCTATTAGGCT  541

seq1  TCCATTGGTTTTCCCACACTCTTCCTTATATGCCTCTTCCTGCATAAGCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGGTTTTCCCACACTCTTCCTTATATGCCTCTTCCTGCATAAGCC  591

seq1  TCTCCACCCCCAGTTTTCCACTTTCTACTTTCTTTTTACCTATAATTTAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACCCCCAGTTTTCCACTTTCTACTTTCTTTTTACCTATAATTTAT  641

seq1  TTTCTCCTCCCCTTTAACGCACCTCCCCATATCTCCCTTTTAATTTCCTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTCCCCTTTAACGCACCTCCCCATATCTCCCTTTTAATTTCCTG  691

seq1  GCTTCAACTTGTCTTCCAAATTAAATACACAAAACAAAAGTTTGCAACTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAACTTGTCTTCCAAATTAAATACACAAAACAAAAGTTTGCAACTA  741

seq1  GGATATAAATATAGGAGGGAACTTGGGGCCTGAAGTACCAGTTTTTCAGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATAAATATAGGAGGGAACTTGGGGCCTGAAGTACCAGTTTTTCAGT  791

seq1  TCTATCCATTTCTTTGTTTTTTTGTTCTTTGCCTGAACAAAGAACCGCAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCCATTTCTTTGTTTTTTTGTTCTTTGCCTGAACAAAGAACCGCAC  841

seq1  CGTATTGTGTGTATGTTTTTCTTATGTATTCATCTGTTGGGATATCCTAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATTGTGTGTATGTTTTTCTTATGTATTCATCTGTTGGGATATCCTAG  891

seq1  CTGCTTCATGTTCTTCCTCTTGTGAAGAGAGGAGCCCAAAACATGGCTGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCATGTTCTTCCTCTTGTGAAGAGAGGAGCCCAAAACATGGCTGT  941

seq1  CTGAGTGTCTCTGAGGTAGAGTATGAAGTCCTTTGAATGTGGCTCAGGAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGTCTCTGAGGTAGAGTATGAAGTCCTTTGAATGTGGCTCAGGAG  991

seq1  TAGTATAGCTGGGTCTTAAGCAGTTTTATTCA  1030
      ||||||||||||||||||||||||||||||||
seq2  TAGTATAGCTGGGTCTTAAGCAGTTTTATTCA  1023