BAC Information

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BAC

Clone NameB6Ng01-100H20
Chromosome13 (Build37)
Map Location 36,207,383 - 36,208,412
singlet/doubletsinglet
Overlap geneLyrm4
Upstream geneCdyl, Rpp40, LOC100041568, Ppp1r3g, LOC100042773
Downstream geneFars2, LOC100041590, LOC666758, Nrn1, F13a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100H20.bB6Ng01-100H20.g
ACCDH909974DH909975
length1,028137
definitionDH909974|Mus musculus domesticus DNA, BAC clone: B6Ng01-100H20, 5' end.DH909975|Mus musculus domesticus DNA, BAC clone: B6Ng01-100H20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttagtttatccagcctcgccaaactgaaatcttactgctagatc
ctagagtctaggacctataacaagaggacaggagcatcaattcttcaaaa
acatttaaaacttaaatttattttaagttataaaatgtatgttaatgagt
tactatgcgtgcacctcacttaaatgcactaaaacttacatttttaactc
tgccccatttctttccttgcttggcctattcccctacttgtatgagtccc
ttatacttccttgccacatggtagtggtgcacacctttaaccccagcact
gggaaggcacaggcagccagagcgctgaaatcgaggccaccatgaactac
acagagaaacccagtctcaaaaaaaccaaaacaacacacacacacacaca
cacacaaaactctacctcagaacctccaccttcacagtttctgcttcttt
gaaacttctgacccaacatttctgtagagttttagggtttttctgatatt
tggtgtcttattgattaattacctgaatcctttgagattgaatctaagaa
taagaatctgatgaaaccagctcattttctccagacagtttgcttatttt
catttatttcccaagtctttcaagtacttaacaagctgtccttcacagct
gcccaggcatgggctgggtgtcttggcagttaactcctgaaacagacctg
gttctaggtgcacccttctctagggattgagctacccgtccggctatgca
ctactttagtctgtgaacagatgcaccaactttcccagcagtaattcata
tttcagaaacctgctgagaaaataatagttgtcgtgtcaactgagaatag
cacatgggttggacaagtgagctcatacccagccgaacataggttttgat
tttatgtgatgacattggctttggaggaaagggggcataaaacacaaacc
tcctggtagagtttccacaaatactgttattacttactattgatggaaga
acagaaaacatggaagtaaatgctggag
cacgtatgatgatttaacatgatcatctccagttccatggattttcctga
aaattatatgattaccttcttttctggtgctaaattaaatctcagtgtgt
gtaagtgtgtggtgtatggtatgtggtgtgtgtgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_36207383_36208412
seq2: B6Ng01-100H20.b_46_1073 (reverse)

seq1  CTCCAAGCATTTACTTCCATGTTTCCTG-TCTTCCATCAATAGTAAGTAA  49
      |||| ||||||||||||||||||| ||| |||||||||||||||||||||
seq2  CTCC-AGCATTTACTTCCATGTTTTCTGTTCTTCCATCAATAGTAAGTAA  49

seq1  TAACAGGTATTTGTGGAAACTCCTACCAGGAGGTTTAGTG-TTTATGCCC  98
      ||||| ||||||||||||||| |||||||||||||| ||| |||||||||
seq2  TAACA-GTATTTGTGGAAACT-CTACCAGGAGGTTT-GTGTTTTATGCCC  96

seq1  CCTCTCCTCCAAAGCCAATGTCATCACATAAAATCAAAACCTATGTTCGG  148
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCTCCAAAGCCAATGTCATCACATAAAATCAAAACCTATGTTCGG  146

seq1  CTGGGTATGAGCTCACTTGTCCAACCCATGTGCTATTCTCAGTTGACACG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTATGAGCTCACTTGTCCAACCCATGTGCTATTCTCAGTTGACACG  196

seq1  ACAACTATTATTTTCTCAGCAGGTTTCTGAAATATGAATTACTGCTGGGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTATTATTTTCTCAGCAGGTTTCTGAAATATGAATTACTGCTGGGA  246

seq1  AAGTTGGTGCATCTGTTCACAGACTAAAGTAGTGCATAGCCGGACGGGTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGGTGCATCTGTTCACAGACTAAAGTAGTGCATAGCCGGACGGGTA  296

seq1  GCTCAATCCCTAGAGAAGGGTGCACCTAGAACCAGGTCTGTTTCAGGAGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAATCCCTAGAGAAGGGTGCACCTAGAACCAGGTCTGTTTCAGGAGT  346

seq1  TAACTGCCAAGACACCCAGCCCATGCCTGGGCAGCTGTGAAGGACAGCTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGCCAAGACACCCAGCCCATGCCTGGGCAGCTGTGAAGGACAGCTT  396

seq1  GTTAAGTACTTGAAAGACTTGGGAAATAAATGAAAATAAGCAAACTGTCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGTACTTGAAAGACTTGGGAAATAAATGAAAATAAGCAAACTGTCT  446

seq1  GGAGAAAATGAGCTGGTTTCATCAGATTCTTATTCTTAGATTCAATCTCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAATGAGCTGGTTTCATCAGATTCTTATTCTTAGATTCAATCTCA  496

seq1  AAGGATTCAGGTAATTAATCAATAAGACACCAAATATCAGAAAAACCCTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTCAGGTAATTAATCAATAAGACACCAAATATCAGAAAAACCCTA  546

seq1  AAACTCTACAGAAATGTTGGGTCAGAAGTTTCAAAGAAGCAGAAACTGTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTACAGAAATGTTGGGTCAGAAGTTTCAAAGAAGCAGAAACTGTG  596

seq1  AAGGTGGAGGTTCTGAGGTAGAGTTTTGTGTGTGTGTGTGTGTGTGTGTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGGAGGTTCTGAGGTAGAGTTTTGTGTGTGTGTGTGTGTGTGTGTT  646

seq1  GTTTTGGTTTTTTTGAGACTGGGTTTCTCTGTGTAGTTCATGGTGGCCTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGGTTTTTTTGAGACTGGGTTTCTCTGTGTAGTTCATGGTGGCCTC  696

seq1  GATTTCAGCGCTCTGGCTGCCTGTGCCTTCCCAGTGCTGGGGTTAAAGGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCAGCGCTCTGGCTGCCTGTGCCTTCCCAGTGCTGGGGTTAAAGGT  746

seq1  GTGCACCACTACCATGTGGCAAGGAAGTATAAGGGACTCATACAAGTAGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACCACTACCATGTGGCAAGGAAGTATAAGGGACTCATACAAGTAGG  796

seq1  GGAATAGGCCAAGCAAGGAAAGAAATGGGGCAGAGTTAAAAATGTAAGTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAGGCCAAGCAAGGAAAGAAATGGGGCAGAGTTAAAAATGTAAGTT  846

seq1  TTAGTGCATTTAAGTGAGGTGCACGCATAGTAACTCATTAACATACATTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGCATTTAAGTGAGGTGCACGCATAGTAACTCATTAACATACATTT  896

seq1  TATAACTTAAAATAAATTTAAGTTTTAAATGTTTTTGAAGAATTGATGCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTTAAAATAAATTTAAGTTTTAAATGTTTTTGAAGAATTGATGCT  946

seq1  CCTGTCCTCTTGTTATAGGTCCTAGACTCTAGGATCTAGCAGTAAGATTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCCTCTTGTTATAGGTCCTAGACTCTAGGATCTAGCAGTAAGATTT  996

seq1  CAGTTTGGCGAGGCTGGATAAACTAAGAATTC  1030
      ||||||||||||||||||||||||||||||||
seq2  CAGTTTGGCGAGGCTGGATAAACTAAGAATTC  1028