BAC Information

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BAC

Clone NameB6Ng01-100I17
Chromosome13 (Build37)
Map Location 65,735,447 - 65,736,317
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC238678, LOC631470, Cntnap3, EG432767, 4930458L03Rik, LOC218301, LOC628515, 4932441B19Rik, Gm274, Hiatl1, LOC100042311, Olfr465-ps1, Olfr466, Nlrp4f, ENSMUSG00000074847, Zfp369, LOC100042347, LOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777, EG628648, LOC665809, LOC100042404
Downstream geneLOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100I17.g
ACCDH910015
length872
definitionDH910015|Mus musculus domesticus DNA, BAC clone: B6Ng01-100I17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcataatcagtgttaggatattcattatggaatgatgttttttttt
tgtcatgacagggtttctctgtgtaaccccagctttcctagaactcgctt
tgcagaccaggctgacctctaactcacagacatgcttgcctctgcctcct
gagtgctgggataaaaggcatgcactactatcacccagctagataatctt
tttagtcagacgacagattaagtcagaaattgtggtaggatggatggtgt
gggtgctgtggcccctgggtagggcctggtagacagttagaggagacttc
catactgctctgacagtatgagtgcccatgtccctgacaaaagatagagg
atccttgcaaattagtgagcctcagattgggcctggaacacagcggtggc
tgctttccccatctgcacagaagtcctgtctggtgttagcctccctatgg
tgatagtggaatggttgactaccccagagctcttatggattccccattgg
tccaaaggctgtataaaaatgcctgatgctactacacaatacaacagata
tgcacctcagtgtttgtctcctgagtctgtatcccatgatagcaactctg
ccttctgcactccttcctggatccctgttcccacagggatgaaagatatt
ttcatacaaagcacaggatatccaaactaacaaaaacctctgcttgggga
aattgatgctgagtggtgaaatacactgctattttaaatataacccacta
atttaaatcaaaaactgaggggctgataggtgatttagtcagcaaagttt
ttatcctcagaactcttgctttaacaacaactacctcacaaaactactag
atggggaggggtatgtggtaat
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_65735447_65736317
seq2: B6Ng01-100I17.g_67_938 (reverse)

seq1  ATTACCACATACCCCTCCCCATCTAGTAGTTTTGTTGAGGTAGTTGTTGT  50
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  ATTACCACATACCCCTCCCCATCTAGTAGTTTTG-TGAGGTAGTTGTTG-  48

seq1  TTAAAGCAAGAGTTCTGAGGATAAAAACTTTGCTGACTAAATCACCTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCAAGAGTTCTGAGGATAAAAACTTTGCTGACTAAATCACCTATC  98

seq1  AGCCCCTCAGTTTTTGA-TTAAATTAGTGGGTTATATTTAAAATAGCAGT  149
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGCCCCTCAGTTTTTGATTTAAATTAGTGGGTTATATTTAAAATAGCAGT  148

seq1  GTATTTCACCACTCAGCATCAATTTCCCCAAGCAGAGG-TTTTGTTAGTT  198
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTATTTCACCACTCAGCATCAATTTCCCCAAGCAGAGGTTTTTGTTAGTT  198

seq1  TGGATATCCTGTGCTTTGTATGAAAATATCTTTCAT-CCTGTGGGAACAG  247
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGGATATCCTGTGCTTTGTATGAAAATATCTTTCATCCCTGTGGGAACAG  248

seq1  GGATCCAGGAAGGAGTGCAGAAGGCAGAGTTGCTATCATGGGATACAGAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCAGGAAGGAGTGCAGAAGGCAGAGTTGCTATCATGGGATACAGAC  298

seq1  TCAGGAGACAAACACTGAGGTGCATATCTGTTGTATTGTGTAGTAGCATC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGACAAACACTGAGGTGCATATCTGTTGTATTGTGTAGTAGCATC  348

seq1  AGGCATTTTTATACAGCCTTTGGACCAATGGGGAATCCATAAGAGCTCTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTTTTATACAGCCTTTGGACCAATGGGGAATCCATAAGAGCTCTG  398

seq1  GGGTAGTCAACCATTCCACTATCACCATAGGGAGGCTAACACCAGACAGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGTCAACCATTCCACTATCACCATAGGGAGGCTAACACCAGACAGG  448

seq1  ACTTCTGTGCAGATGGGGAAAGCAGCCACCGCTGTGTTCCAGGCCCAATC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGTGCAGATGGGGAAAGCAGCCACCGCTGTGTTCCAGGCCCAATC  498

seq1  TGAGGCTCACTAATTTGCAAGGATCCTCTATCTTTTGTCAGGGACATGGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTCACTAATTTGCAAGGATCCTCTATCTTTTGTCAGGGACATGGG  548

seq1  CACTCATACTGTCAGAGCAGTATGGAAGTCTCCTCTAACTGTCTACCAGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATACTGTCAGAGCAGTATGGAAGTCTCCTCTAACTGTCTACCAGG  598

seq1  CCCTACCCAGGGGCCACAGCACCCACACCATCCATCCTACCACAATTTCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACCCAGGGGCCACAGCACCCACACCATCCATCCTACCACAATTTCT  648

seq1  GACTTAATCTGTCGTCTGACTAAAAAGATTATCTAGCTGGGTGATAGTAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAATCTGTCGTCTGACTAAAAAGATTATCTAGCTGGGTGATAGTAG  698

seq1  TGCATGCCTTTTATCCCAGCACTCAGGAGGCAGAGGCAAGCATGTCTGTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCCTTTTATCCCAGCACTCAGGAGGCAGAGGCAAGCATGTCTGTG  748

seq1  AGTTAGAGGTCAGCCTGGTCTGCAAAGCGAGTTCTAGGAAAGCTGGGGTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGAGGTCAGCCTGGTCTGCAAAGCGAGTTCTAGGAAAGCTGGGGTT  798

seq1  ACACAGAGAAACCCTGTCATGACAAAAAAAAAACATCATTCCATAATGAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAGAAACCCTGTCATGACAAAAAAAAAACATCATTCCATAATGAA  848

seq1  TATCCTAACACTGATTATGAATTC  871
      ||||||||||||||||||||||||
seq2  TATCCTAACACTGATTATGAATTC  872