BAC Information

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BAC

Clone NameB6Ng01-100J12
Chromosome13 (Build37)
Map Location 117,848,246 - 117,849,341
singlet/doubletsinglet
Overlap genenone
Upstream geneEG623174, Isl1, EG668276, Gm280, LOC100041169, Parp8, LOC668288
Downstream geneLOC623312, Emb, EG623365, LOC382807, Hcn1, LOC100041695, LOC674926
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100J12.bB6Ng01-100J12.g
ACCDH910044DH910045
length1,0941,241
definitionDH910044|Mus musculus domesticus DNA, BAC clone: B6Ng01-100J12, 5' end.DH910045|Mus musculus domesticus DNA, BAC clone: B6Ng01-100J12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaataaaacttaagcatgataaatgttcttagcaaactagagata
aaagtgcttttagtgtccatttataaatcagaaattattcttggtcttca
aagcaggaatgatttaatataaatgattggctgccatggtgatggaggcc
aaaccagacatgatgattcagctactccggagcaggagacagtaagcccc
gaggtctagaaggctaacagcagtttgcttttggagccaggaggctagac
atgggtgagaggtcagatcagaatcacctggtgggaactggttcatgaca
ggaggtaccctctggcaagagttgaacctgcagagaagagacaggaatca
ctggaaataccagaagacaacaggataatctgtcatcctggcatctcctg
ctgtttcctagtagctatcccattgtgaagttggagggcaaagaaaacgg
aaagtactattttattgaactacagaatggagtaggagaaagagatgtga
aggcacactcatcagaattcaataaatgattgaacagagatggaggaagt
tgcttgttaaggcgcatgagcttcacaagtatttcaatgacctggtttta
aaacttggaggtataaatagtattattatttcaggactgatctgatatac
atattttataaacaatcttccatatgtagtaaatattttattatacttcc
aaacaataggatacaaatttataagtacactctaatctcttttattgttt
cctatattattatacatggtatgcaagcacagaaatatatgtgaactttg
ataagggagagtatttttcataaaaggcaaaaacacaccctcaaattata
agtaaaggtataagacctacagttgatgaactgtatgaggatgtagctga
atgatagactgttttacatggagtgaatgaagaaggatctggcttcagtg
ctcagcatcacggatagatagatagatagatagatagatagatagtagat
agatagatgataaaaggagtcggcaatcgtaagacaatgaaatcaactct
cttagtgatgaccatttaaaattcagtgctacccatctgggagg
gaattcacctggaccagagaacatcagctagcctttgaaactctcaaaaa
ggcactgctgcaggctccggcattggccctgccagatttaaacaaacctt
tcaccctatacattgatgaaagaaatggagtgacaagaggagtccttacc
caggttttgggaccatagaagcgcccggtagcctacttatcaaagaaact
ggacgctgtggccagtggatggccctcctgcctgcgagtgatagcagcca
cggctgtgctagtaaaagatgctgacaaactgactatgggccagaatgtt
actatagtggccccacactctcttgagagcatcatcaggcaaccaccgga
ccgctagatgaccaacgcccgaatgacgcactaccagagcctattgctga
cagagcgagtaagttttgcacccccagccattctcaaccccgccccctta
ctacctgaggctgacgaggcccctgcacataagtgtgaagaaatactggc
agaagagactggaatccggccagacctcacagaccaaccttggccagggg
cgatgacttggttcacggacggaagcagctttgtggtagaaggtaagcgg
aaggctggggcgacagtagtggataaaaaggctgtcatatgggccagcag
tctgccggagggtacatcagctcaaaaagcggaactaatcgcattaattc
aagccttaaggctggcagaagaaagggctcttaatgtctataccgacagc
cagtatgcttttgccacggctcatgttcacggagcaatataccgacaccg
tggactgctgacgtctgccggcaaagatatcaaaaataaaaaagaaattc
tccagctttattagaagctgttcatttgccccgtagggtggcaattatcc
attgcccaggacaccagaaggtactgggcctgttaaaagagaaatcaaat
tgcagaccagaagctaaaaagcagcccagggtccatgactctggtggtga
gacccaacaaccgctgctgaggaataataaagaccttccgaagaaagagg
gcgagaatacttagctactcccatctaactcttaggactaaaaatatcct
aatggttagtagttccctattcactctctcgagaataaagaaattggaaa
gaatgataaaactgtccgtctttgcactaccacctgtctcgtctgtagtt
accctgtgcgtaggagcagccacgtctgatcactatccgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_117848246_117849341
seq2: B6Ng01-100J12.b_45_1138

seq1  GAATTCAATAAAACTTAAGCATGATAAATGTTCTTAGCAAACTAGAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAAAACTTAAGCATGATAAATGTTCTTAGCAAACTAGAGATA  50

seq1  AAAGTGCTTTTAGTGTCCATTTATAAATCAGAAATTATTCTTGGTCTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCTTTTAGTGTCCATTTATAAATCAGAAATTATTCTTGGTCTTCA  100

seq1  AAGCAGGAATGATTTAATATAAATGATTGGCTGCCATGGTGATGGAGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGAATGATTTAATATAAATGATTGGCTGCCATGGTGATGGAGGCC  150

seq1  AAACCAGACATGATGATTCAGCTACTCCGGAGCAGGAGACAGTAAGCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGACATGATGATTCAGCTACTCCGGAGCAGGAGACAGTAAGCCCC  200

seq1  GAGGTCTAGAAGGCTAACAGCAGTTTGCTTTTGGAGCCAGGAGGCTAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTAGAAGGCTAACAGCAGTTTGCTTTTGGAGCCAGGAGGCTAGAC  250

seq1  ATGGGTGAGAGGTCAGATCAGAATCACCTGGTGGGAACTGGTTCATGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTGAGAGGTCAGATCAGAATCACCTGGTGGGAACTGGTTCATGACA  300

seq1  GGAGGTACCCTCTGGCAAGAGTTGAACCTGCAGAGAAGAGACAGGAATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTACCCTCTGGCAAGAGTTGAACCTGCAGAGAAGAGACAGGAATCA  350

seq1  CTGGAAATACCAGAAGACAACAGGATAATCTGTCATCCTGGCATCTCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAATACCAGAAGACAACAGGATAATCTGTCATCCTGGCATCTCCTG  400

seq1  CTGTTTCCTAGTAGCTATCCCATTGTGAAGTTGGAGGGCAAAGAAAACGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCCTAGTAGCTATCCCATTGTGAAGTTGGAGGGCAAAGAAAACGG  450

seq1  AAAGTACTATTTTATTGAACTACAGAATGGAGTAGGAGAAAGAGATGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTACTATTTTATTGAACTACAGAATGGAGTAGGAGAAAGAGATGTGA  500

seq1  AGGCACACTCATCAGAATTCAATAAATGATTGAACAGAGATGGAGGAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACACTCATCAGAATTCAATAAATGATTGAACAGAGATGGAGGAAGT  550

seq1  TGCTTGTTAAGGCGCATGAGCTTCACAAGTATTTCAATGACCTGGTTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTTAAGGCGCATGAGCTTCACAAGTATTTCAATGACCTGGTTTTA  600

seq1  AAACTTGGAGGTATAAATAGTATTATTATTTCAGGACTGATCTGATATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGGAGGTATAAATAGTATTATTATTTCAGGACTGATCTGATATAC  650

seq1  ATATTTTATAAACAATCTTCCATATGTAGTAAATATTTTATTATACTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTATAAACAATCTTCCATATGTAGTAAATATTTTATTATACTTCC  700

seq1  AAACAATAGGATACAAATTTATAAGTACACTCTAATCTCTTTTATTGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATAGGATACAAATTTATAAGTACACTCTAATCTCTTTTATTGTTT  750

seq1  CCTATATTATTATACATGGTATGCAAGCACAGAAATATATGTGAACTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATATTATTATACATGGTATGCAAGCACAGAAATATATGTGAACTTTG  800

seq1  ATAAGGGAGAGTA-TTTTCATAAAAGGCAAAAACACACCCTCAAATTATA  849
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATAAGGGAGAGTATTTTTCATAAAAGGCAAAAACACACCCTCAAATTATA  850

seq1  AGT-AAGGTATAAGACCTACAGTTGATGAACTGTATGAGGATGTAGCTGA  898
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGGTATAAGACCTACAGTTGATGAACTGTATGAGGATGTAGCTGA  900

seq1  ATGATAGACTG-TTTACATGGAGTGAATGAAG-AGGATCTGGCTTCAGTG  946
      ||||||||||| |||||||||||||||||||| |||||||||||||||||
seq2  ATGATAGACTGTTTTACATGGAGTGAATGAAGAAGGATCTGGCTTCAGTG  950

seq1  CTCAGCATCACGGATAGATAGATAGATAGATAGATAGATAGATAGATAGA  996
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTCAGCATCACGGATAGATAGATAGATAGATAGATAGATAGATAG-TAGA  999

seq1  TAGATAGATAGATAAAAAGGAGTCGGCAAATCGTAAGAC-ATGAAATCAA  1045
      ||||||||| ||| ||||||||||||| ||||||||||| ||||||||||
seq2  TAGATAGAT-GAT-AAAAGGAGTCGGC-AATCGTAAGACAATGAAATCAA  1046

seq1  CTCTCTTTAGTGATGACCATTTAAAATTCAAGTGCTACCCATTCAGGGAG  1095
      ||||| ||||||||||||||||||||||| ||||||||||| || |||||
seq2  CTCTC-TTAGTGATGACCATTTAAAATTC-AGTGCTACCCA-TCTGGGAG  1093

seq1  G  1096
      |
seq2  G  1094