BAC Information

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BAC

Clone NameB6Ng01-100L01
Chromosome13 (Build37)
Map Location 10,869,921 - 11,033,298
singlet/doubletdoublet
Overlap genenone
Upstream geneChrm3, LOC100039604
Downstream geneLOC100039648, Zp4, Ryr2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100L01.bB6Ng01-100L01.g
ACCDH910115DH910116
length1,0191,136
definitionDH910115|Mus musculus domesticus DNA, BAC clone: B6Ng01-100L01, 5' end.DH910116|Mus musculus domesticus DNA, BAC clone: B6Ng01-100L01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,869,921 - 10,870,919)(11,032,154 - 11,033,298)
sequence
gaattctgcccagtaaggtgagttaatgcccaggaatcattaggctatat
aataatgtcaggaaacacatatcaggatcaagaagcaattctgggatgaa
gtctcttggaaccttgcctctcagagctcacctatcacaaccatgcaaaa
tggtgggccatctccaaaaaactcatttgcatgccttaccctttcttgta
tggctctgacactctatcaccaccctaactgctgccatatttccccacca
tgagaaggatggacttttatcactctggaaccagaagcccaaaataaatc
cttccttatataagttgccttgcccgatggagttttatcacagtaatatg
aaagtaactgaaacgtatattaagagagatctaagtagttttctatgttt
tcattagcaatgccatggttaagataacttatctagaatcatattgttgc
aggtgacttttatgcgtgtaaaatgtttcagtaaatgaatattgaggttt
tataaaactatttggacaaacagcagtctatggaatgggcaaagattttt
accaactatacatccaataaagggttaatatactaaatatataaagaact
caaaacattagatatcaagaaaacaaataaaccaattgaaagtggggtag
aattcttaaaagaggaaatgccacagaaacacttaaataaatgttcaacc
catcaaaggggtgcaaatcaaaactactttgagatttcatcttataacca
tcaaaatttttaagattaataaaactaattaccgctcatgctggcaagga
tacatattaaaatgaacacttatccattgttggtgggagtacaaacttat
acaactacaatggaaaagaattgtagtagtcttcggaaggatgagaacaa
gtctacctgaagatccatctatatcgcctttggacatgtacccaaaagga
tgcttcatctaccacagagatacttgatcaacttcattcatgctgcttat
cataatagtcagaaattga
gaattcaagtccagtagaatttgaatatatcagatgagtttggatgccat
gaaagtctgaaccaaatatgttgcccaaagaatagaattattgttaactg
cctacttctgtattataaatcaataaatctgaagaaaatggaaagagtag
cttattgaagtaaaggataaattctgttatcagtataaaataaaagaata
gtaagtatgaaaagtaataacaattctcacaaatgaaagacgggatggtt
gaacagttatcaaatatgctgtgagttcaagagtacaaagagcaggtcag
gaatagatattcattttccacagaactctgccccatcatctagtcttatc
tattttctgttccttttcctgtgatgttccccaacttgcctgggattgtt
ttttaaatcccccttttgaattgatttaaggaatcatttccttctctttt
ctttttccttttctttttctttttcctggtcattgtcttatttcatccct
ttgacctggttaaaatcaataaaagataaattcacatttgtttgtccttg
tggaataagaataaaggctgagtatgcccccaaagtattccaagcaaacg
tcaactttgcttttccaagagaaagagaaacaaaatagttttaaatttct
ctatattatttactaaacaacaacaacaaaaacttgtgcatgcccctcac
ctgattgtgtaagactttcctaatccttgtggtttttttattgcaaataa
tacataacctgatatcgctgctctgtctcccagatcaatgacagctaatt
aaattttgagatcccatatgaataatacccccaaagaagccaagataaag
ctattaattaaattaaaatgacttaaaccatcatcatgtttgtcatagat
tataactaaggaggtccaatgatatcctactgactcttaaattttaagat
tctctgacttctcttaaaaagacatcagctcatcttctgcccatatgact
aatatataaactttattcagctggctcacaaattgtctcctctaatcttt
ctcttcaatgaatgttatcacattttattctaatctgatcctcaggtatt
tggtctctttctatccctcttttccaccctagtacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_10869921_10870919
seq2: B6Ng01-100L01.b_44_1041

seq1  GAATTCTGCCCAGTAAGGTGAGTTAATGCCCAGGAATCATTAGGCTATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCCCAGTAAGGTGAGTTAATGCCCAGGAATCATTAGGCTATAT  50

seq1  AATAATGTCAGGAAACACATATCAGGATCAAGAAGCAATTCTGGGATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGTCAGGAAACACATATCAGGATCAAGAAGCAATTCTGGGATGAA  100

seq1  GTCTCTTGGAACCTTGCCTCTCAGAGCTCACCTATCACAACCATGCAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTGGAACCTTGCCTCTCAGAGCTCACCTATCACAACCATGCAAAA  150

seq1  TGGTGGGCCATCTCCAAAAAACTCATTTGCATGCCTTACCCTTTCTTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGGCCATCTCCAAAAAACTCATTTGCATGCCTTACCCTTTCTTGTA  200

seq1  TGGCTCTGACACTCTATCACCACCCTAACTGCTGCCATATTTCCCCACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTGACACTCTATCACCACCCTAACTGCTGCCATATTTCCCCACCA  250

seq1  TGAGAAGGATGGACTTTTATCACTCTGGAACCAGAAGCCCAAAATAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGGATGGACTTTTATCACTCTGGAACCAGAAGCCCAAAATAAATC  300

seq1  CTTCCTTATATAAGTTGCCTTGCCCGATGGAGTTTTATCACAGTAATATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTATATAAGTTGCCTTGCCCGATGGAGTTTTATCACAGTAATATG  350

seq1  AAAGTAACTGAAACGTATATTAAGAGAGATCTAAGTAGTTTTCTATGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAACTGAAACGTATATTAAGAGAGATCTAAGTAGTTTTCTATGTTT  400

seq1  TCATTAGCAATGCCATGGTTAAGATAACTTATCTAGAATCATATTGTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAGCAATGCCATGGTTAAGATAACTTATCTAGAATCATATTGTTGC  450

seq1  AGGTGACTTTTATGCGTGTAAAATGTTTCAGTAAATGAATATTGAGGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGACTTTTATGCGTGTAAAATGTTTCAGTAAATGAATATTGAGGTTT  500

seq1  TATAAAACTATTTGGACAAACAGCAGTCTATGGAATGGGCAAAGATTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAACTATTTGGACAAACAGCAGTCTATGGAATGGGCAAAGATTTTT  550

seq1  ACCAACTATACATCCAATAAAGGGTTAATATACTAAATATATAAAGAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACTATACATCCAATAAAGGGTTAATATACTAAATATATAAAGAACT  600

seq1  CAAAACATTAGATATCAAGAAAACAAATAAACCAATTGAAAGTGGGGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACATTAGATATCAAGAAAACAAATAAACCAATTGAAAGTGGGGTAG  650

seq1  AATTCTTAAAAGAGGAAATGCCACAGAAACACTTAAATAAATGTTCAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTAAAAGAGGAAATGCCACAGAAACACTTAAATAAATGTTCAACC  700

seq1  CATCAAAGGGGTGCAAATCAAAACTACTTTGAGATTTCATCTTATAACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAAGGGGTGCAAATCAAAACTACTTTGAGATTTCATCTTATAACCA  750

seq1  TCAAAATTTTTAAGATTAATAAAACTAATTACCGCTCATGCTGGCAAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATTTTTAAGATTAATAAAACTAATTACCGCTCATGCTGGCAAGGA  800

seq1  TACATATTAAAATGAACACTTATCCATTGTTGGTGGGAGTACAAACTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATTAAAATGAACACTTATCCATTGTTGGTGGGAGTACAAACTTAT  850

seq1  ACAACTACAATGG-AAAGAATTGTAGTAGTCTTCGGAAGGATGAGAACAA  899
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACAACTACAATGGAAAAGAATTGTAGTAGTCTTCGGAAGGATGAGAACAA  900

seq1  GTCTACCTGAAGATCCATCTATATCGCCCTTGGACATGTACCCAAAAGGA  949
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GTCTACCTGAAGATCCATCTATATCGCCTTTGGACATGTACCCAAAAGGA  950

seq1  TGCTTCATCCTACCACAGAGATACTTGATCAACTTCATTCATTGCTGCTT  999
      |||||||| |||||||||||||||||||||||||||||||| ||||||||
seq2  TGCTTCAT-CTACCACAGAGATACTTGATCAACTTCATTCA-TGCTGCTT  998

seq1: chr13_11032154_11033298
seq2: B6Ng01-100L01.g_69_1204 (reverse)

seq1  GGTACCTAGGGTGGATAAGAGGGATAAGAGAAGAGACAAAATACCTGAGG  50
      |||| |||||||||| ||||||||| ||| ||||||| ||||||||||||
seq2  GGTA-CTAGGGTGGAAAAGAGGGAT-AGA-AAGAGACCAAATACCTGAGG  47

seq1  ATCAGATTAAGAATAAAATTGTGATAACATTCATTGAAGGAGAAAGATTT  100
      |||||||| ||||||||| ||||||||||||||||||| |||||||| ||
seq2  ATCAGATT-AGAATAAAA-TGTGATAACATTCATTGAA-GAGAAAGA-TT  93

seq1  AGAGGAAGACAATTTGTGAGCAGACTGAATAAAGTTTATATA-TAGTCAT  149
      ||||| |||||||||||||||   |||||||||||||||||| |||||||
seq2  AGAGG-AGACAATTTGTGAGCCAGCTGAATAAAGTTTATATATTAGTCAT  142

seq1  ATGGGCAGAAGATGGAGCTGATGTCTTTTTTAAGAGAAGTCAGGAGAATC  199
      ||||||||||||| ||||||||||| |||||||||||||||| |||||||
seq2  ATGGGCAGAAGAT-GAGCTGATGTC-TTTTTAAGAGAAGTCA-GAGAATC  189

seq1  TAAAATTTTAAGAGTCAGTAGGATATCATTGGA-CTCCTTAGTTATAATC  248
      | ||| ||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTAAAATTTAAGAGTCAGTAGGATATCATTGGACCTCCTTAGTTATAATC  239

seq1  TATGAC-AACATGATGATGGTTTAAGTCATTTTAATTTTAATTTAATAGC  297
      |||||| |||||||||||||||||||||||||||||||  | ||||||||
seq2  TATGACAAACATGATGATGGTTTAAGTCATTTTAATTT--AATTAATAGC  287

seq1  TTTATCTTGGCTTCTTTGGGGGTATTATTCATATGGGATCTC-AAATTTA  346
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTATCTTGGCTTCTTTGGGGGTATTATTCATATGGGATCTCAAAATTTA  337

seq1  ATTAGCTGTCATTGATCTGGGAGACAGAGCAGCGATATCAGGTTATGTAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCTGTCATTGATCTGGGAGACAGAGCAGCGATATCAGGTTATGTAT  387

seq1  TATTTGCAATATAAAAACCACAAGGATTAGGAAAGTCTTACACAATCAGG  446
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCAATAAAAAAACCACAAGGATTAGGAAAGTCTTACACAATCAGG  437

seq1  TGAGGGGCATGCACAAGTTTTTGTTGTTGTTGTTTAGTAAATAATATAGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGCATGCACAAGTTTTTGTTGTTGTTGTTTAGTAAATAATATAGA  487

seq1  GAAATTTAAAACTATTTTGTTTCTCTTTCTCTTGGAAAAGCAAAGTTGAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTAAAACTATTTTGTTTCTCTTTCTCTTGGAAAAGCAAAGTTGAC  537

seq1  GTTTGCTTGGAATACTTTGGGGGCATACTCAGCCTTTATTCTTATTCCAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTTGGAATACTTTGGGGGCATACTCAGCCTTTATTCTTATTCCAC  587

seq1  AAGGACAAACAAATGTGAATTTATCTTTTATTGATTTTAACCAGGTCAAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAAACAAATGTGAATTTATCTTTTATTGATTTTAACCAGGTCAAA  637

seq1  GGGATGAAATAAGACAATGACCAGGAAAAAGAAAAAGAAAAGGAAAAAGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGAAATAAGACAATGACCAGGAAAAAGAAAAAGAAAAGGAAAAAGA  687

seq1  AAAGAGAAGGAAATGATTCCTTAAATCAATTCAAAAGGGGGATTTAAAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAAGGAAATGATTCCTTAAATCAATTCAAAAGGGGGATTTAAAAA  737

seq1  ACAATCCCAGGCAAGTTGGGGAACATCACAGGAAAAGGAACAGAAAATAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCCCAGGCAAGTTGGGGAACATCACAGGAAAAGGAACAGAAAATAG  787

seq1  ATAAGACTAGATGATGGGGCAGAGTTCTGTGGAAAATGAATATCTATTCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGACTAGATGATGGGGCAGAGTTCTGTGGAAAATGAATATCTATTCC  837

seq1  TGACCTGCTCTTTGTACTCTTGAACTCACAGCATATTTGATAACTGTTCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGCTCTTTGTACTCTTGAACTCACAGCATATTTGATAACTGTTCA  887

seq1  ACCATCCCGTCTTTCATTTGTGAGAATTGTTATTACTTTTCATACTTACT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCCCGTCTTTCATTTGTGAGAATTGTTATTACTTTTCATACTTACT  937

seq1  ATTCTTTTATTTTATACTGATAACAGAATTTATCCTTTACTTCAATAAGC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTTATTTTATACTGATAACAGAATTTATCCTTTACTTCAATAAGC  987

seq1  TACTCTTTCCATTTTCTTCAGATTTATTGATTTATAATACAGAAGTAGGC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTTTCCATTTTCTTCAGATTTATTGATTTATAATACAGAAGTAGGC  1037

seq1  AGTTAACAATAATTCTATTCTTTGGGCAACATATTTGGTTCAGACTTTCA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAACAATAATTCTATTCTTTGGGCAACATATTTGGTTCAGACTTTCA  1087

seq1  TGGCATCCAAACTCATCTGATATATTCAAATTCTACTGGACTTGAATTC  1145
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATCCAAACTCATCTGATATATTCAAATTCTACTGGACTTGAATTC  1136