BAC Information

Click to search

BAC

Clone NameB6Ng01-100O11
Chromosome13 (Build37)
Map Location 30,764,787 - 30,900,839
singlet/doubletdoublet
Overlap geneDusp22, LOC666443, Irf4
Upstream geneCdkal1, E2f3, Mboat1, Agtr1a, Uqcrfs1
Downstream geneExoc2, Hus1b, EG432743, LOC100041257, LOC100041266, G630018N14Rik, LOC100042491, Foxq1, LOC100041312, Foxf2, Foxc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100O11.bB6Ng01-100O11.g
ACCDH910263DH910264
length1,045732
definitionDH910263|Mus musculus domesticus DNA, BAC clone: B6Ng01-100O11, 5' end.DH910264|Mus musculus domesticus DNA, BAC clone: B6Ng01-100O11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,899,783 - 30,900,839)(30,764,787 - 30,765,515)
sequence
gaattcactcctgcctgctcctcttctgtggtggctcagacgctttatgc
cgttgtggttcactccctcacctggtctggtcacctcctacagaaggagc
acattggaagtaacaatgttgaggttttcatatctgaagaaaatctacat
tgttcccttctatggaagtagagttctagactggacatcatttttcctta
gtgttcagaagactgcccagttgtcctcgccctgcttgcagaatctctcc
tttgcttagtttctggaattcatgattccatgctggaccgttgttctttt
attcctactagggagtagaatgtcgcaaattctgtgatttttttttttct
ggaattgtttctataaatcttcagcagtcctggacggttggttaattcag
ttggttgtttttctgagtccttacatttacaactcttccttcttgttgtg
ttgattctgctttctgcgacatttttaacttgctttttgtcctcagacta
ttctcttaggaccccacatacttactttcctggagatattcatagtcctc
tcttcaaggatcttgttttgtttctgttttcacccatctgcattgcagta
ggtgctgtggatacataatggtatttgcgagtagggttctctaaagctga
ctgaggcggtgatactgtatggtggacagggcctctcaacttgcatgtca
gtcttactgggatggacactcagtagggaatcttcagcatttctgtgggg
ctgatcagattccaagggaaagatcttaagaatctcatgtgaggcacccc
atgggagccaagtgaggaaggaatctctgaggtcattattgacaggcagt
agcctgttcttcatggcatttctaaagtctctgcatctaatcaggaaagt
taaaagtaagtcctgaccctggcagagtggaggtaaaggccaagatgttt
gcccagcttgtgtgggcagaggagccccaggcaccagctgttaataaatg
cccacagactaatcactgggtttgaccaacctatcctcccttgtg
gaattcccacctagcttaggctacagagtgagactctgtgttaataatta
actaactaactaatttattaattaattaaaatttgggttgagggcctctt
gattatagggtagccctagcacacgtgaggatgtaggttgcatctctaga
accacgggggggggggacatttaaataagtaaaacctattgctgcttcaa
aattatttctgctttagtaggatcctaatgaattcaaattgctcatatcc
tgcggatgtttgccacaaaagttctaataccatttgttttaactagtaag
aacaagaaggcaggcaagccacccctgtgattttttttttctttcccagg
cctggtctgaatggacaacatcaatagagagctgttgcgttttaggttta
ggggagtaaacagggtgtgtctgcttgtacactaattccaaaaacatctt
caattttaccctgttggacggtttgagctgttgatcaggagcaaaatcta
tttctgtttctgccgtggcacagcccaggttaacctcttttagaaaacaa
tgcctgtgtggttgtgatgcatgttttttctattttagggttgggtgtta
ggaagggaggggtacttgttctgaaacaaagactcctggttcaggctgtt
tttcattgaaagccacatcatgtaagagtagggtagtatgtgtataggta
agggacgtatccattttccttggctttgtagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_30899783_30900839
seq2: B6Ng01-100O11.b_47_1091 (reverse)

seq1  CACAAGGGAGGATTAGGTTTGGGTCAAAACCCAGTGATTAGTCTGTGGGC  50
      |||||||||||| ||||||  |||| ||||||||||||||||||||||||
seq2  CACAAGGGAGGA-TAGGTT--GGTC-AAACCCAGTGATTAGTCTGTGGGC  46

seq1  ATTTAATAAACAGCCTGGTGCCCTGGGGCTCCCTCTTGCCCACAC-AGCT  99
      |||| || ||||| |||||| ||||||||| |||| ||||||||| ||||
seq2  ATTT-ATTAACAG-CTGGTG-CCTGGGGCT-CCTC-TGCCCACACAAGCT  91

seq1  GGGCAAACATCTTGGCCTTTACCCTCCCCTCCTGCCAGGGTCAGGACTTT  149
      ||||||||||||||||||||| ||||| || |||||||||||||||| ||
seq2  GGGCAAACATCTTGGCCTTTA-CCTCCACT-CTGCCAGGGTCAGGAC-TT  138

seq1  ACTTTTAACTTTCCCTGATTAGATGCAGAGACCTTAGAAATGCCATGAAG  199
      |||||||||||| ||||||||||||||||||| |||||||||||||||||
seq2  ACTTTTAACTTT-CCTGATTAGATGCAGAGACTTTAGAAATGCCATGAAG  187

seq1  AACAGGCTACTGCCTGTCAATAATGACCTCAGAGATTCCTTCCTCACTTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCTACTGCCTGTCAATAATGACCTCAGAGATTCCTTCCTCACTTG  237

seq1  GCTCCCATGGGGTGCCTCACATGAGATTCTTAAGATCTTTCCCTTGGAAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCATGGGGTGCCTCACATGAGATTCTTAAGATCTTTCCCTTGGAAT  287

seq1  CTGATCAGCCCCACAGAAATGCTGAAGATTCCCTACTGAGTGTCCATCCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCAGCCCCACAGAAATGCTGAAGATTCCCTACTGAGTGTCCATCCC  337

seq1  AGTAAGACTGACATGCAAGTTGACTGGCCCTGTCCACCATACAGTATCAC  399
      |||||||||||||||||||||||  |||||||||||||||||||||||||
seq2  AGTAAGACTGACATGCAAGTTGAGAGGCCCTGTCCACCATACAGTATCAC  387

seq1  CGCCTCAGTCAGCTTTAGAGAACCCTACTCGCAAATACCATTATGTATCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTCAGTCAGCTTTAGAGAACCCTACTCGCAAATACCATTATGTATCC  437

seq1  ACAGCACCTACTGCAATGCAGATGGGTGAAAACAGAAACAAAACAAGATC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACCTACTGCAATGCAGATGGGTGAAAACAGAAACAAAACAAGATC  487

seq1  CTTGAAGAGAGGACTATGAATATCTCCAGGAAAGTAAGTATGTGGGGTCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGAGAGGACTATGAATATCTCCAGGAAAGTAAGTATGTGGGGTCC  537

seq1  TAAGAGAATAGTCTGAGGACAAAAAGCAAGTTAAAAATGTCGCAGAAAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGAATAGTCTGAGGACAAAAAGCAAGTTAAAAATGTCGCAGAAAGC  587

seq1  AGAATCAACACAACAAGAAGGAAGAGTTGTAAATGTAAGGACTCAGAAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCAACACAACAAGAAGGAAGAGTTGTAAATGTAAGGACTCAGAAAA  637

seq1  ACAACCAACTGAATTAACCAACCGTCCAGGACTGCTGAAGATTTATAGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCAACTGAATTAACCAACCGTCCAGGACTGCTGAAGATTTATAGAA  687

seq1  ACAATTCCAGAAAAAAAAAAATCACAGAATTTGCGACATTCTACTCCCTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCCAGAAAAAAAAAAATCACAGAATTTGCGACATTCTACTCCCTA  737

seq1  GTAGGAATAAAAGAACAACGGTCCAGCATGGAATCATGAATTCCAGAAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAATAAAAGAACAACGGTCCAGCATGGAATCATGAATTCCAGAAAC  787

seq1  TAAGCAAAGGAGAGATTCTGCAAGCAGGGCGAGGACAACTGGGCAGTCTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAAAGGAGAGATTCTGCAAGCAGGGCGAGGACAACTGGGCAGTCTT  837

seq1  CTGAACACTAAGGAAAAATGATGTCCAGTCTAGAACTCTACTTCCATAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACACTAAGGAAAAATGATGTCCAGTCTAGAACTCTACTTCCATAGA  887

seq1  AGGGAACAATGTAGATTTTCTTCAGATATGAAAACCTCAACATTGTTACT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAACAATGTAGATTTTCTTCAGATATGAAAACCTCAACATTGTTACT  937

seq1  TCCAATGTGCTCCTTCTGTAGGAGGTGACCAGACCAGGTGAGGGAGTGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATGTGCTCCTTCTGTAGGAGGTGACCAGACCAGGTGAGGGAGTGAA  987

seq1  CCACAACGGCATAAAGCGTCTGAGCCACCACAGAAGAGGAGCAGGCAGGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAACGGCATAAAGCGTCTGAGCCACCACAGAAGAGGAGCAGGCAGGA  1037

seq1  GTGAATTC  1057
      ||||||||
seq2  GTGAATTC  1045

seq1: chr13_30764787_30765515
seq2: B6Ng01-100O11.g_69_800

seq1  GAATTCCCACCTAGCTTAGGCTACAGAGTGAGACTCTGTGTTAATAATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACCTAGCTTAGGCTACAGAGTGAGACTCTGTGTTAATAATTA  50

seq1  ACTAACTAACTAATTTATTAATTAATTAAAATTTGGGTTGAGGGCCTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACTAACTAATTTATTAATTAATTAAAATTTGGGTTGAGGGCCTCTT  100

seq1  GATTATAGGGTAGCCCTAGCACACGTGAGGATGTAGGTTGCATCTCTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATAGGGTAGCCCTAGCACACGTGAGGATGTAGGTTGCATCTCTAGA  150

seq1  ACCACGGGGGGGGGGGACATTTAAATAAGTAAAACCTATTGCTGCTTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACGGGGGGGGGGGACATTTAAATAAGTAAAACCTATTGCTGCTTCAA  200

seq1  AATTATTTCTGCTTTAGTAGGATCCTAATGAATTCAAATTGCTCATATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTCTGCTTTAGTAGGATCCTAATGAATTCAAATTGCTCATATCC  250

seq1  TGCGGATGTTTGCCACAAAAGTTCTAATACCATTTGTTTTAACTAGTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGATGTTTGCCACAAAAGTTCTAATACCATTTGTTTTAACTAGTAAG  300

seq1  AACAAGAAGGCAGGCAAGCCACCCCTGTGATTTTTTTTTTCTTTCCCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAAGGCAGGCAAGCCACCCCTGTGATTTTTTTTTTCTTTCCCAGG  350

seq1  CCTGGTCTGAATGGACAACATCAATAGAGAGCTGTTGCGTTTTAGGTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCTGAATGGACAACATCAATAGAGAGCTGTTGCGTTTTAGGTTTA  400

seq1  GGGGAGTAAACAGGGTGTGTCTGCTTGTACACTAATTCCAAAAACATCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGTAAACAGGGTGTGTCTGCTTGTACACTAATTCCAAAAACATCTT  450

seq1  CAATTTTACCCTGTTGGACGGTTTGAGCTGTTGATCAGGAGCAAAATCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTACCCTGTTGGACGGTTTGAGCTGTTGATCAGGAGCAAAATCTA  500

seq1  TTTCTGTTTCTGCCGTGGCACAGCCCAGGTTAACCTCTTTTAGAAAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTTCTGCCGTGGCACAGCCCAGGTTAACCTCTTTTAGAAAACAA  550

seq1  TGCCTGTGTGGTTGTGATGCATGTTTTTTCTATTTTAGGGTTGGGTGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTGTGGTTGTGATGCATGTTTTTTCTATTTTAGGGTTGGGTGTTA  600

seq1  GGAAGGGAGGGGTACTTGTTCTGAAACAAAGACTCCTGGTTCAGGCTG-T  649
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GGAAGGGAGGGGTACTTGTTCTGAAACAAAGACTCCTGGTTCAGGCTGTT  650

seq1  TTTCATTGAAAGCCACATCATGTAAGAGTA-GGTAGTATGTGTATAGGT-  697
      |||||||||||||||||||||||||||||| |||||||||||||||||| 
seq2  TTTCATTGAAAGCCACATCATGTAAGAGTAGGGTAGTATGTGTATAGGTA  700

seq1  ATGGACGTATCCATTTTCCTTGGCTTTGTAGC  729
      | ||||||||||||||||||||||||||||||
seq2  AGGGACGTATCCATTTTCCTTGGCTTTGTAGC  732