BAC Information

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BAC

Clone NameB6Ng01-101I24
Chromosome10 (Build37)13 (Build37)
Map Location 32,565,181 - 32,566,29368,673,521 - 68,674,057
singlet/doubletsingletsinglet
Overlap geneTcba1
Upstream genenone
Downstream geneEG667761, Trdn, A330019N05Rik, LOC100040686, EG215895, LOC100041399
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101I24.bB6Ng01-101I24.g
ACCDH910709DH910710
length1,0921,065
definitionDH910709|Mus musculus domesticus DNA, BAC clone: B6Ng01-101I24, 5' end.DH910710|Mus musculus domesticus DNA, BAC clone: B6Ng01-101I24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(32,565,181 - 32,566,293)(68,673,521 - 68,674,057)
sequence
gaattcaagtaaatagtagcagaagacagatacaactctcaagttttatt
aatgaatacatgaatatgtagatgggtatactgtaaataaagcaacatca
ttttcttcttattcacacaaaacaactttgttatcagtatgccctcaaaa
ctatgttcaaaatataggcacagcgaaggactttatgaaatattgaaatt
tatagcacaaataaatagagattaatgcgatcaacatctgagtctttgaa
aagataacagaatccatagtcaaggtgaataagaaaagataaaatgtaaa
tcactttcaaatttgcaaaatgagacagttaggatcctatagataataaa
gggttaggggaagagtactaagaataacttttagccaagtggactgaaat
gaactcaaagacatacactaccaaatttacagagaagctacacacacaca
cacacatacacacatacacacacataaacaatcttccaaaataaaaaatg
atccagatttgttcattagtaaatttaaatgaacatttaaagaaagactc
caataccaaaatcacacaattattttattttacaggaaagaaaaactgaa
ggtaataactctaatatatagaaatcacgtaagaattcagagaaactgtg
gcagcattcacaggggtctcagtgctgagagaaagagaagatgcaagccc
catccctaacccagaatccacatctacatccaattgataaccactcacaa
atgaaaaacaagtttttttccaatagagtttcactgggggatacaaacca
ctgttatgggctgcctcacgcccagcattaactacataatacaaacaaac
tcaataatctctttggaggtcctttgtcttgtacggttttgacagggctg
tggtttgttgttggtagtattgttttatttatttcacatctcctttatat
tatacattatgacttccagttttatgtttaaagatcctttgctagtacat
gtgtgtcttcctcatctacatataaattatgcttttcatgtcttttcctc
tatttattgtcaatttactaattatttattaattacgatcat
gaattcttaattcttaattagcaccacagcagccttataataggatgtta
aaactttgaggtgaagaaggatgattttacattaatgtttatttttgcca
aaaaatagctgtagacacatttaatagaaataactagaatatgtaactaa
tatttgattaccatcaattacaatcgataccaatagattacagaagtttc
ttctactttctgttaaagcctttttggttctcaccagttaattggaatct
cacttgatagcaccttaacaaaggcttaggttctcttgtggcaagtttaa
ggtgaggtcttagccaattaacatatcctgtaaacttttggaaataaaat
tttgaagtaaatttgtaccaattttccagtatgactgaaaccttaattat
taaaaaagatattgcctctgaaacttatgaagcaacaactattctccaga
actttaaacttccctttagagacattagctaatgaaatacttttcactta
ggaaacaatatatactgaaagatttaaaccatttgcttcttgtattgaag
ccgataataaaaatttcttacatattgttaagctatattagccataccta
ggggcaaaaacctttaatggttaccagttcactagaagtaaactctttac
aaatggaaaaaattaaacttttaaatctataataattttaatgcctttat
aagttttatagcctgattgaccttttataaacttttgaatttaaatttta
tttagaacaacatctggctaggtcttcaataaggctctaaaggagtgcca
cacaagccgagctgaagctgctcccctctgagctctgccttaatccaaat
gtaaactttttttaatccgaacactttgtcagagtcttggctcaagatat
ccctaggttgaagtatccttaaagacttgtttctgtgtttgtcatgttgt
tagaaagactccaaccttgagttcccattttagctaactttctgtacagc
aagctgctgccccttagagttcgtttgcagctttttagctgtactggctc
ccagccaaggcagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_32565181_32566293
seq2: B6Ng01-101I24.b_48_1139

seq1  GAATTCAAGTAAATAGTAGCAGAAGACAGATACAACTCTCAAGTTTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTAAATAGTAGCAGAAGACAGATACAACTCTCAAGTTTTATT  50

seq1  AATGAATACATGAATATGTAGATGGGTATACTGTAAATAAAGCAACATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATACATGAATATGTAGATGGGTATACTGTAAATAAAGCAACATCA  100

seq1  TTTTCTTCTTATTCACACAAAACAACTTTGTTATCAGTATGCCCTCAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCTTATTCACACAAAACAACTTTGTTATCAGTATGCCCTCAAAA  150

seq1  CTATGTTCAAAATATAGGCACAGCGAAGGACTTTATGAAATATTGAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTCAAAATATAGGCACAGCGAAGGACTTTATGAAATATTGAAATT  200

seq1  TATAGCACAAATAAATAGAGATTAATGCGATCAACATCTGAGTCTTTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCACAAATAAATAGAGATTAATGCGATCAACATCTGAGTCTTTGAA  250

seq1  AAGATAACAGAATCCATAGTCAAGGTGAATAAGAAAAGATAAAATGTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAACAGAATCCATAGTCAAGGTGAATAAGAAAAGATAAAATGTAAA  300

seq1  TCACTTTCAAATTTGCAAAATGAGACAGTTAGGATCCTATAGATAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTCAAATTTGCAAAATGAGACAGTTAGGATCCTATAGATAATAAA  350

seq1  GGGTTAGGGGAAGAGTACTAAGAATAACTTTTAGCCAAGTGGACTGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAGGGGAAGAGTACTAAGAATAACTTTTAGCCAAGTGGACTGAAAT  400

seq1  GAACTCAAAGACATACACTACCAAATTTACAGAGAAGCTACACACACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAAAGACATACACTACCAAATTTACAGAGAAGCTACACACACACA  450

seq1  CACACATACACACATACACACACATAAACAATCTTCCAAAATAAAAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATACACACATACACACACATAAACAATCTTCCAAAATAAAAAATG  500

seq1  ATCCAGATTTGTTCATTAGTAAATTTAAATGAACATTTAAAGAAAGACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGATTTGTTCATTAGTAAATTTAAATGAACATTTAAAGAAAGACTC  550

seq1  CAATACCAAAATCACACAATTATTTTATTTTACAGGAAAGAAAAACTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACCAAAATCACACAATTATTTTATTTTACAGGAAAGAAAAACTGAA  600

seq1  GGTAATAACTCTAATATATAGAAATCACGTAAGAATTCAGAGAAACTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATAACTCTAATATATAGAAATCACGTAAGAATTCAGAGAAACTGTG  650

seq1  GCAGCATTCACAGGGGTCTCAGTGCTGAGAGAAAGAGAAGATGCAAGCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCATTCACAGGGGTCTCAGTGCTGAGAGAAAGAGAAGATGCAAGCCC  700

seq1  CATCCCTAACCCAGAATCCACATCTACATCCAATTGATAACCACTCACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTAACCCAGAATCCACATCTACATCCAATTGATAACCACTCACAA  750

seq1  ATGAAAAACAAGTTTTTTTCCAATAGAGTTTCACT-GGGGATACAAACCA  799
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATGAAAAACAAGTTTTTTTCCAATAGAGTTTCACTGGGGGATACAAACCA  800

seq1  CTGTTATGGGCTGCCTCACGCCCAGCATTAACTACATAATACAAACAAAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTATGGGCTGCCTCACGCCCAGCATTAACTACATAATACAAACAAAC  850

seq1  TCAATAATCTCTTTGGAGGTCCTTTGTCTTGTACGGTTTTGACAGGGCTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAATCTCTTTGGAGGTCCTTTGTCTTGTACGGTTTTGACAGGGCTG  900

seq1  TGGTTTTGTTGTTGGTAGTATTGTTTTATTTTTATTTCACATCTCCTTTA  949
      ||| ||||||||||||||||||||||||  ||||||||||||||||||||
seq2  TGG-TTTGTTGTTGGTAGTATTGTTTTA--TTTATTTCACATCTCCTTTA  947

seq1  TTATTATACATTATGACTTCCAGTTTTATGTTTAAAGATTCCTTTGCTAG  999
       ||||||||||||||||||||||||||||||||||||| |||||||||| 
seq2  -TATTATACATTATGACTTCCAGTTTTATGTTTAAAGA-TCCTTTGCTA-  994

seq1  GTACATGTGTGTC-TCCTCATCTACATATAAATTTTATGCTTTTTCATTG  1048
      ||||||||||||| ||||||||||||||||||  |||||| |||||| ||
seq2  GTACATGTGTGTCTTCCTCATCTACATATAAA--TTATGC-TTTTCA-TG  1040

seq1  TCTCTTTTCCCTCTATTTATTTTGTCCTATTTTACTTATTTTATTTTATT  1098
      ||   ||| ||||||||||  |||||  | |||||| ||| | | |||  
seq2  TC---TTTTCCTCTATTTA--TTGTC--AATTTACTAATTATTTATTA--  1081

seq1  TTATTTTACGATCAT  1113
           ||||||||||
seq2  ----ATTACGATCAT  1092

seq1: chr13_68673521_68674057
seq2: B6Ng01-101I24.g_607_1133

seq1  CTTGTATTGAAGCCGATAATAAAAATTTCTTACATATTGTTAAGCTATGT  50
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTTGTATTGAAGCCGATAATAAAAATTTCTTACATATTGTTAAGCTATAT  50

seq1  TAGCCATACCTAGGGGCAAAAACCTTTAATGGTCACCAGTTCACTAGAAG  100
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TAGCCATACCTAGGGGCAAAAACCTTTAATGGTTACCAGTTCACTAGAAG  100

seq1  TAAACTCTTTACAAATGG-AAAAATTAAACTTTTAAATCTATAATAATTG  149
      |||||||||||||||||| |||||||||||||||||||||||||||||| 
seq2  TAAACTCTTTACAAATGGAAAAAATTAAACTTTTAAATCTATAATAATTT  150

seq1  TAATGCCTTTATAAGTTTTATAGCCTGATTGACCTTTCATAAACTTTTGA  199
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TAATGCCTTTATAAGTTTTATAGCCTGATTGACCTTTTATAAACTTTTGA  200

seq1  ATTTAAATTTTATTTTGAACAATGTCTGGCTAGGTCTGTTATAAGGCTCT  249
      ||||||||||||||| ||||||  |||||||||||||   ||||||||||
seq2  ATTTAAATTTTATTTAGAACAACATCTGGCTAGGTCTTCAATAAGGCTCT  250

seq1  -AAGAAGTGCCACACAAGCCGAGCTGAAGCTGCTCCCCTCTGAGCTCAGC  298
       ||| |||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGGAGTGCCACACAAGCCGAGCTGAAGCTGCTCCCCTCTGAGCTCTGC  300

seq1  CTCAACCCAAATG-----------TAATCTGAACACTCTGCTAGAGTCTT  337
      || || |||||||           ||||| ||||||| ||  ||||||||
seq2  CTTAATCCAAATGTAAACTTTTTTTAATCCGAACACTTTGTCAGAGTCTT  350

seq1  GGCTCAAAGATTATCTCTATGTTGAAGTATCCTTAAAGACCTGTTTTCTT  387
      ||||| |||| |||| ||| |||||||||||||||||||| |||||   |
seq2  GGCTC-AAGA-TATCCCTAGGTTGAAGTATCCTTAAAGACTTGTTT--CT  396

seq1  GTGTTTGTTTATGTTGTTTAGAAAGACTTCAACCTTGAGTTCTCAATTTT  437
      ||||||| | |||||| ||||||||||| ||||||||||||| ||  |||
seq2  GTGTTTG-TCATGTTG-TTAGAAAGACTCCAACCTTGAGTTCCCA--TTT  442

seq1  AAGCTAACTTTCTGTTACAAGCAAAAGGCTGTCTGCCCCTTTAAGAGCTC  487
       ||||||||||||| ||| |||||   |||| |||||||||  |||| | 
seq2  TAGCTAACTTTCTG-TAC-AGCAA---GCTG-CTGCCCCTT--AGAG-TT  483

seq1  CGATTGTAAGGCTTTTTTAGCTGTACTTGGCTCCCAGCCACAATGCAGCT  537
      || ||| |  || ||||||||||||| |||||||||||  ||| ||||||
seq2  CGTTTGCA--GC-TTTTTAGCTGTAC-TGGCTCCCAGC--CAAGGCAGCT  527