BAC Information

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BAC

Clone NameB6Ng01-103J17
Chromosome13 (Build37)
Map Location 67,592,498 - 67,648,830
singlet/doubletdoublet
Overlap geneZfp817, Zfp87, Zfp748
Upstream geneC330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik
Downstream geneA530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103J17.bB6Ng01-103J17.g
ACCDH912141DH912142
length1,2061,118
definitionDH912141|Mus musculus domesticus DNA, BAC clone: B6Ng01-103J17, 5' end.DH912142|Mus musculus domesticus DNA, BAC clone: B6Ng01-103J17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,647,600 - 67,648,830)(67,592,498 - 67,593,461)
sequence
gaattcctgggtcatgagtgtttaaattttaccgtatatttctttttcta
taattttgaggtcatccagatgtggctgaaatctaagttataatttactt
gatttttgacaatgacattgtggtgcacatgtttataatgaactgttcag
tcacacaaaacaatggaattctgtaatttgcgtcaatatagaagagactg
aaaaatattatttctgatacagaaagacaagtaatcacatgacctcaaac
acaggttgagtcttaagaatattaacttacagaagttggagaaataatga
ttttgcccatcaggaaagggaggcattgaaaaatattgatcagtcagtgc
tctcatacagataaatagaaggaagaagcttaatagtcagtgttgtccag
gatagtgactgtaagtcatagaagatcagaaaacataatttgttttgttt
tgtttgagacagtgatatagtgctggctaccctagaacttgctgtgtaaa
tcaggttggtctggaactcatagcgattacctgcctctgcctcccaagtt
ctgaaattaaagacatgcattataacacctggcctaagaactttggaatt
tttaaacttagtaacattaactgttaaaaggaatgatcattttaaaattg
ataaaaaagacaatgatgagtctacctatagcaaaacacccctttgaaca
tataaatctatgattttctattatctagtcatagaacaggagaaataatg
tactgctgtcattgaccatttgagaacgttacgcaatgaaataaaagcat
cccaacactaaaatgtaaaaataattaaataagggaaagtaataattaga
atcacaaattataattcttaagcccagcagattaagataaagttgccatg
atttcaaaggggcattatgagcatgataaatacatgaatacatgtttaag
aaagataaacacacgggagaaagagaagtgaaagaatattagagtgatgt
ctagttattttaaatattaacaaagtgttgttatgctctacttctcagaa
tgtattcatagcatagatgctatgtgttatttatggtattattatattct
gaatgactgactgtcttattcaggaaatgctgtcattcaggatgtggcga
tgattccttgcaagattggagtcctggacctgcctcagtggaatctgtta
acaggg
gaattctttgatgacgcttaaggaatgcggaagagtaaaatgccctgtcg
cagtctttacacttacagggtttctttccagcatgaattctttgatgtcg
cttaagcaatgaagggtagtgaaaggctttgccacattctgcacacttgt
agggtttctctgcagaatgaattatttgatgcttcttaagcaataaagga
cagtaaaatggtttcccacattcttcacacttgtaagatttctctgcaga
atgaattctttgatgtaccttaagcaatgaagggtaggaaaattctttgg
cgcattcttcacacttgtatggttttttcccagtatggtttttctggtgt
ctataatatgttgagcgagtactgaaggccttgccacattcttcacattt
gtacggtttttctccagtatggattctcttgtgttcagaaaggtttgaat
gactattaaaagccttaccacattcttcacatttgtagggtttttctccc
gtatgaactctctggtgtgtagaaagttttgagcgaatacgaaaggcctt
accacattcttcacatttgtagggtttttctccagtatgtattctcttgt
gttcagaaaggtttgaacgattattaaaggccttaccacattcttcacac
ttgaaggctttctcccctgtacgaattctctggtgctgagtaagcagtga
cttgcaaaaaaaggccttgctgaaatctttacatttgttgacggtttttc
ctgttgaccaaaagttgatttatgaacaaaagcttagcacattctttata
tttttaatgtttccctttaaatggagacatatactcctacttacatttct
tattgataaatcagaaagaacacaacatttcctactcctgttttcattta
gcatgattcagaaaatatagtagaggaaacaatctaagcttctactgaaa
taaaagcttggtcaaattgattatagaaattagcccaccaggtagtagtg
gtgcatgctttcatctggcactctggaggcagagaagagtgggtatctgt
gagtcaggccagctggtgtacgattgagttcaggacagttcaagttacaa
ggagaaaccctttctcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67647600_67648830
seq2: B6Ng01-103J17.b_49_1254 (reverse)

seq1  CCCTGT--ACAGATTCCACTGA-GCAGGCTCCAGGCACTCCCACTCCTCT  47
      ||||||  |||||||||||||| ||||| |||||| ||| ||| ||   |
seq2  CCCTGTTAACAGATTCCACTGAGGCAGG-TCCAGG-ACT-CCAATC--TT  45

seq1  GCAGAGAAATCAACGGCCACATCCCTGAATGACAGCATTTCCTGAAATAA  97
      ||| || ||||| | ||||||| |||||||||||||||||||||||   |
seq2  GCA-AGGAATCATC-GCCACAT-CCTGAATGACAGCATTTCCTGAA--TA  90

seq1  AGACAAGTCAGTCAATATCAG-ATATAATAATAACCAATAATATAAACAC  146
      |||| |||||||||   |||| |||||||||| ||||  |||   |||||
seq2  AGAC-AGTCAGTCA--TTCAGAATATAATAAT-ACCATAAAT---AACAC  133

seq1  CAATAAGCATCCTATGCTTATGAATACATTCTGAGGAAGTAGAGCAATTA  196
        || ||||| |||||| |||||||||||||||| |||||||||||  ||
seq2  --AT-AGCAT-CTATGC-TATGAATACATTCTGA-GAAGTAGAGCA--TA  175

seq1  ACAACACTTTGTTAATATTTAAAATAACTAGACATCACTCTAATATTCTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACACTTTGTTAATATTTAAAATAACTAGACATCACTCTAATATTCTT  225

seq1  TCACTTTCTCCTTTTCTCCCGTGTGTTTATCTTTCTTAAACATGTATTCA  296
      |||| |||||  ||||||||||||||||||||||||||||||||||||||
seq2  TCAC-TTCTC--TTTCTCCCGTGTGTTTATCTTTCTTAAACATGTATTCA  272

seq1  TGTATTTATCATGCTCATAATGCCACCTTTGAAATCATGGCAACTTTATC  346
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGTATTTATCATGCTCATAATGCC-CCTTTGAAATCATGGCAACTTTATC  321

seq1  TTAATCTGCTGGGCTTAAGAATTATAATTTGTGATTCTAATTATTACTTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTGCTGGGCTTAAGAATTATAATTTGTGATTCTAATTATTACTTT  371

seq1  CCCTTATTTAATTATTTTTACATTTTAGTGTTGGGATGCTTTTATTTCAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTATTTAATTATTTTTACATTTTAGTGTTGGGATGCTTTTATTTCAT  421

seq1  TGCGTAACGTTCTCAAATGGTCAATGACAGCAGTACATTATTTCTCCTGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTAACGTTCTCAAATGGTCAATGACAGCAGTACATTATTTCTCCTGT  471

seq1  TCTATGACTAGATAATAGAAAATCATAGATTTATATGTTCAAAGGGGTGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGACTAGATAATAGAAAATCATAGATTTATATGTTCAAAGGGGTGT  521

seq1  TTTGCTATAGGTAGACTCATCATTGTCTTTTTTATCAATTTTAAAATGAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTATAGGTAGACTCATCATTGTCTTTTTTATCAATTTTAAAATGAT  571

seq1  CATTCCTTTTAACAGTTAATGTTACTAAGTTTAAAAATTCCAAAGTTCTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTTTTAACAGTTAATGTTACTAAGTTTAAAAATTCCAAAGTTCTT  621

seq1  AGGCCAGGTGTTATAATGCATGTCTTTAATTTCAGAACTTGGGAGGCAGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGGTGTTATAATGCATGTCTTTAATTTCAGAACTTGGGAGGCAGA  671

seq1  GGCAGGTAATCGCTATGAGTTCCAGACCAACCTGATTTACACAGCAAGTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGTAATCGCTATGAGTTCCAGACCAACCTGATTTACACAGCAAGTT  721

seq1  CTAGGGTAGCCAGCACTATATCACTGTCTCAAACAAAACAAAACAAATTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGTAGCCAGCACTATATCACTGTCTCAAACAAAACAAAACAAATTA  771

seq1  TGTTTTCTGATCTTCTATGACTTACAGTCACTATCCTGGACAACACTGAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTGATCTTCTATGACTTACAGTCACTATCCTGGACAACACTGAC  821

seq1  TATTAAGCTTCTTCCTTCTATTTATCTGTATGAGAGCACTGACTGATCAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGCTTCTTCCTTCTATTTATCTGTATGAGAGCACTGACTGATCAA  871

seq1  TATTTTTCAATGCCTCCCTTTCCTGATGGGCAAAATCATTATTTCTCCAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCAATGCCTCCCTTTCCTGATGGGCAAAATCATTATTTCTCCAA  921

seq1  CTTCTGTAAGTTAATATTCTTAAGACTCAACCTGTGTTTGAGGTCATGTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTAAGTTAATATTCTTAAGACTCAACCTGTGTTTGAGGTCATGTG  971

seq1  ATTACTTGTCTTTCTGTATCAGAAATAATATTTTTCAGTCTCTTCTATAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTGTCTTTCTGTATCAGAAATAATATTTTTCAGTCTCTTCTATAT  1021

seq1  TGACGCAAATTACAGAATTCCATTGTTTTGTGTGACTGAACAGTTCATTA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGCAAATTACAGAATTCCATTGTTTTGTGTGACTGAACAGTTCATTA  1071

seq1  TAAACATGTGCACCACAATGTCATTGTCAAAAATCAAGTAAATTATAACT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATGTGCACCACAATGTCATTGTCAAAAATCAAGTAAATTATAACT  1121

seq1  TAGATTTCAGCCACATCTGGATGACCTCAAAATTATAGAAAAAGAAATAT  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTCAGCCACATCTGGATGACCTCAAAATTATAGAAAAAGAAATAT  1171

seq1  ACGGTAAAATTTAAACACTCATGACCCAGGAATTC  1231
      |||||||||||||||||||||||||||||||||||
seq2  ACGGTAAAATTTAAACACTCATGACCCAGGAATTC  1206

seq1: chr13_67592498_67593461
seq2: B6Ng01-103J17.g_228_1184

seq1  GCAGAATGAATTATTTGATGCTTCTTAAGCAATAAAGGACAGTAAAATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAATGAATTATTTGATGCTTCTTAAGCAATAAAGGACAGTAAAATGG  50

seq1  TTTCCCACATTCTTCACACTTGTAAGATTTCTCTGCAGAATGAATTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCACATTCTTCACACTTGTAAGATTTCTCTGCAGAATGAATTCTTT  100

seq1  GATGTACCTTAAGCAATGAAGGGTAGGAAAATTCTTTGGCGCATTCTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTACCTTAAGCAATGAAGGGTAGGAAAATTCTTTGGCGCATTCTTCA  150

seq1  CACTTGTATGGTTTTTTCCCAGTATGGTTTTTCTGGTGTCTATAATATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTATGGTTTTTTCCCAGTATGGTTTTTCTGGTGTCTATAATATGT  200

seq1  TGAGCGAGTACTGAAGGCCTTGCCACATTCTTCACATTTGTACGGTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCGAGTACTGAAGGCCTTGCCACATTCTTCACATTTGTACGGTTTTT  250

seq1  CTCCAGTATGGATTCTCTTGTGTTCAGAAAGGTTTGAATGACTATTAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTATGGATTCTCTTGTGTTCAGAAAGGTTTGAATGACTATTAAAA  300

seq1  GCCTTACCACATTCTTCACATTTGTAGGGTTTTTCTCCCGTATGAACTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTACCACATTCTTCACATTTGTAGGGTTTTTCTCCCGTATGAACTCT  350

seq1  CTGGTGTGTAGAAAGTTTTGAGCGAATACGAAAGGCCTTACCACATTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTGTAGAAAGTTTTGAGCGAATACGAAAGGCCTTACCACATTCTT  400

seq1  CACATTTGTAGGGTTTTTCTCCAGTATGTATTCTCTTGTGTTCAGAAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTGTAGGGTTTTTCTCCAGTATGTATTCTCTTGTGTTCAGAAAGG  450

seq1  TTTGAACGATTATTAAAGGCCTTACCACATTCTTCACACTTGAAGGCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACGATTATTAAAGGCCTTACCACATTCTTCACACTTGAAGGCTTT  500

seq1  CTCCCCTGTACGAATTCTCTGGTGCTGAGTAAGCAGTGACTTGCAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTGTACGAATTCTCTGGTGCTGAGTAAGCAGTGACTTGCAAAAAA  550

seq1  AGGCCTTGCTGAAATCTTTACATTTGTTGACGGTTTTTCCTGTTGACCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTTGCTGAAATCTTTACATTTGTTGACGGTTTTTCCTGTTGACCAA  600

seq1  AAGTTGATTTATGAACAAAAGCTTAGCACATTCTTTATATTTTTAATGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGATTTATGAACAAAAGCTTAGCACATTCTTTATATTTTTAATGTT  650

seq1  TCCCTTTAAATGGAGACATATACTCCTACTTACA-TTCTTATTGATAAAT  699
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCCCTTTAAATGGAGACATATACTCCTACTTACATTTCTTATTGATAAAT  700

seq1  CAGAAAGAACACAACA-TTCCTACCCCTGTATTCATTTAGCATGATTCAG  748
      |||||||||||||||| ||||||| ||||| |||||||||||||||||||
seq2  CAGAAAGAACACAACATTTCCTACTCCTGTTTTCATTTAGCATGATTCAG  750

seq1  AAAATATAGTAGGAGGAAACAATCTAAGCTTCTACTGAAATAAAAGCTTG  798
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAAATATAGTA-GAGGAAACAATCTAAGCTTCTACTGAAATAAAAGCTTG  799

seq1  GTCAAATTGATTATAGAAATAAGGCCCACCAGGTAGTAGTGGTGCATGCC  848
      |||||||||||||||||||| | ||||||||||||||||||||||||| |
seq2  GTCAAATTGATTATAGAAATTA-GCCCACCAGGTAGTAGTGGTGCATG-C  847

seq1  TTTAATCCTGGCACTCTGGAGGCAGAGAGAAGTGGGTATCTGTGAGTTCC  898
      ||| || |||||||||||||||||||||  |||||||||||||||||  |
seq2  TTTCAT-CTGGCACTCTGGAGGCAGAGAAGAGTGGGTATCTGTGAGT--C  894

seq1  AGGCCAGCCTGGTGTACAGATTGAGTTCCAAGACAGTCAAGGTTACAAAG  948
      ||||||| ||||||||| ||||||||| || ||||||  | ||||||| |
seq2  AGGCCAG-CTGGTGTAC-GATTGAGTT-CAGGACAGTTCAAGTTACAAGG  941

seq1  AGAAACCCTATCTCAA  964
      ||||||||| ||||||
seq2  AGAAACCCTTTCTCAA  957