BAC Information

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BAC

Clone NameB6Ng01-104F14
Chromosome13 (Build37)
Map Location 5,511,171 - 5,512,334
singlet/doubletsinglet
Overlap genenone
Upstream geneAkr1c20, Akr1c21, Akr1e1, EG432721, EG432723
Downstream gene1700016G22Rik, Klf6, LOC100039388, LOC100039395
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104F14.bB6Ng01-104F14.g
ACCDH912676DH912677
length1,1591,099
definitionDH912676|Mus musculus domesticus DNA, BAC clone: B6Ng01-104F14, 5' end.DH912677|Mus musculus domesticus DNA, BAC clone: B6Ng01-104F14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcattaatgccagtgttttaacgtcatctttttgttcttacaa
ttttaagggccttgagtagaaatttcatatgattaagcattgtaaaccat
ttagttatgtaaatatctctaaaatccacacacttcacttctgtattcaa
gcttgttctataacatcttgctggggtttacactaattgtcattgtaact
ttacagagaagcaaaattgctaaatgcaaaagtggtctgttatttccttt
tttttattacgtgttttcctcaattacatttccaatgctatcccaaaagt
cccccacaccctccccccccaactcccctacccacccattcccatttttt
ggccctggcgttcccctgtactggggcatataaagtttgcctatccaatg
ggcatctctttccagtgatggctgactaggccatcttttgatacatatgt
tatttccttaatctgacctactataaatcttataataaatatcaaaagta
tttaagagatatttaatgcaaatcaatacaaattttaagtagtttttaaa
taaacaggtggatggattcttttatttcatggcttctgataagtgaactt
aggtaagattttcagtatttgcttatgctgtttctgtatatctgatattt
cctaggaaacagtaacacctgggagatggacataattatatgaatttcac
ctatgacaataactgtacataacatctttgtaaatatgcatatccttttc
cgtaaaggacaaagaatacattttcccaagcgaactagtgttttggctaa
caattcaaatgaaagccagatccttttgattgggccacatttctcaagtc
aacttcttctgtgaaatcagctcagattttatgtgctaaaaatgacataa
catgttactcaatgaaagatgtagtaattgactgaaagataggagagaac
agtagaaaattacatttggtaaaataagtttctattactatataaacatt
agttttacactaaagaaaagctgtatttagtaagtttattacatagccat
gttgatttgagtcatttctttccattaagcaccctaaacataacttcctc
ctcctggtgtatattttgcacccaccagcgatttctgatctcattgctac
atggtcttt
gaattctctatttcactcttgattgaatttttaaaattgggttatttgta
tctttagtgtataaattcttgagttctttataaattgtggatattagtgt
tatgtcaaatgtaggattggtgaagatcctttcccaatctgtaggattcg
attttgtcctattgacagtgtcctttgccttaaagaaggttttcagtgtc
atgaggtctcacttattggttgttgatcttagagcctgagccattgttct
tctgttcagggagttgtatcctgtacaaagtagtttaaggtttttcccta
gtttttgttatattagatttattgtatccagttttatgttgaggtgtttt
actttgtgtttctttgtcaaaaataaaatctccataggtctgtgggttta
tttttgggttttcaattcaattatattgatcaacctctcttttcctattc
cataatattttttattactatttcactgtggtacagcttgaagtcaggga
tggtgatacctccagaagttcattattgttaaggattattttagtggtcc
tagatttttttgttattccatatgatattgagaattgttatgttaacgtc
tgtaaggaattgtactggaattttgtggcaattccactgaatctgtaatt
tacttttggtaagatggccattttcactattttaattctactgatccatg
agcatggggcatctttccatcttctgatatcttcctcaaactctgtcttc
agcatcttgatgctcatgtcatataggaattttacaccaaaatatgttat
attatttgtagatattatgaagggtgctgtttccttaatttctttcttgg
cccattgaagactactgcttttttttttttttgataattttgtatccatc
atctttgctgaagttgtttatcagtaacaagagtccttttgtagaatttc
ggggtcgcttatgtatactgtcatatcatcagaaatagcatgcttgacta
cttctttccattgtcatggtcagagtgggtttgaaccatttctagtggtt
ggcctttaatagtgaattaagttaagcaggtggtttcacacagagtcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_5511171_5512334
seq2: B6Ng01-104F14.b_45_1203 (reverse)

seq1  AAAGA-CATGTAGCAATGAGATCTGAAATCTGCTGGTGGGTGCAAAATAT  49
      ||||| ||||||||||||||||| |||||| |||||||||||||||||||
seq2  AAAGACCATGTAGCAATGAGATCAGAAATC-GCTGGTGGGTGCAAAATAT  49

seq1  ACACCAGGA-GAGGAAGTTATGGTTTAGGTTGCTTTAATGGAAAGGAAAT  98
      ||||||||| ||||||||||| ||||||| ||| |||||||||| |||||
seq2  ACACCAGGAGGAGGAAGTTAT-GTTTAGGGTGC-TTAATGGAAA-GAAAT  96

seq1  GACTCAAATCCACATGGCTATGTAATAGACTTACTAAATACAGCTTTTCT  148
      |||||||||| |||||||||||||||| ||||||||||||||||||||||
seq2  GACTCAAATCAACATGGCTATGTAATAAACTTACTAAATACAGCTTTTCT  146

seq1  TTAGTGTAAAACCTAATGTTTATATAGTAATAGGAAACTTTATTTTACCA  198
      ||||||||||| |||||||||||||||||||| ||||| |||||||||||
seq2  TTAGTGTAAAA-CTAATGTTTATATAGTAATA-GAAAC-TTATTTTACCA  193

seq1  AATTGTAATTTTCTTACTGTTCTCTCCTATCTTTCAGTCAATTACTACAT  248
      || |||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AA-TGTAATTTTC-TACTGTTCTCTCCTATCTTTCAGTCAATTACTACAT  241

seq1  CTTTCATTGAGT-ACATGTTATGTCATTTTTAGCACATAAAATCTGAGCT  297
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTTTCATTGAGTAACATGTTATGTCATTTTTAGCACATAAAATCTGAGCT  291

seq1  GATTTCACAGAAGAAGTTGACTTGAGAAATGTGGCCCAATCAAAAGGATC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCACAGAAGAAGTTGACTTGAGAAATGTGGCCCAATCAAAAGGATC  341

seq1  TGGCTTTCATTTGAATTGTTAGCCAAAACACTAGTTCGCTTGGGAAAATG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTCATTTGAATTGTTAGCCAAAACACTAGTTCGCTTGGGAAAATG  391

seq1  TATTCTTTGTCCTTTACGGAAAAGGATATGCATATTTACAAAGATGTTAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTTGTCCTTTACGGAAAAGGATATGCATATTTACAAAGATGTTAT  441

seq1  GTACAGTTATTGTCATAGGTGAAATTCATATAATTATGTCCATCTCCCAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGTTATTGTCATAGGTGAAATTCATATAATTATGTCCATCTCCCAG  491

seq1  GTGTTACTGTTTCCTAGGAAATATCAGATATACAGAAACAGCATAAGCAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTACTGTTTCCTAGGAAATATCAGATATACAGAAACAGCATAAGCAA  541

seq1  ATACTGAAAATCTTACCTAAGTTCACTTATCAGAAGCCATGAAATAAAAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGAAAATCTTACCTAAGTTCACTTATCAGAAGCCATGAAATAAAAG  591

seq1  AATCCATCCACCTGTTTATTTAAAAACTACTTAAAATTTGTATTGATTTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATCCACCTGTTTATTTAAAAACTACTTAAAATTTGTATTGATTTG  641

seq1  CATTAAATATCTCTTAAATACTTTTGATATTTATTATAAGATTTATAGTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAATATCTCTTAAATACTTTTGATATTTATTATAAGATTTATAGTA  691

seq1  GGTCAGATTAAGGAAATAACATATGTATCAAAAGATGGCCTAGTCAGCCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGATTAAGGAAATAACATATGTATCAAAAGATGGCCTAGTCAGCCA  741

seq1  TCACTGGAAAGAGATGCCCATTGGATAGGCAAACTTTATATGCCCCAGTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGAAAGAGATGCCCATTGGATAGGCAAACTTTATATGCCCCAGTA  791

seq1  CAGGGGAACGCCAGGGCCAAAAAATGGGAATGGGTGGGTAGGGGAGTTGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGAACGCCAGGGCCAAAAAATGGGAATGGGTGGGTAGGGGAGTTGG  841

seq1  GGGGGGAGGGTGTGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGAGGGTGTGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGAG  891

seq1  GAAAACACGTAATAAAAAAAAGGAAATAACAGACCACTTTTGCATTTAGC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACACGTAATAAAAAAAAGGAAATAACAGACCACTTTTGCATTTAGC  941

seq1  AATTTTGCTTCTCTGTAAAGTTACAATGACAATTAGTGTAAACCCCAGCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGCTTCTCTGTAAAGTTACAATGACAATTAGTGTAAACCCCAGCA  991

seq1  AGATGTTATAGAACAAGCTTGAATACAGAAGTGAAGTGTGTGGATTTTAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTATAGAACAAGCTTGAATACAGAAGTGAAGTGTGTGGATTTTAG  1041

seq1  AGATATTTACATAACTAAATGGTTTACAATGCTTAATCATATGAAATTTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTACATAACTAAATGGTTTACAATGCTTAATCATATGAAATTTC  1091

seq1  TACTCAAGGCCCTTAAAATTGTAAGAACAAAAAGATGAC-TTAAAACACT  1146
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TACTCAAGGCCCTTAAAATTGTAAGAACAAAAAGATGACGTTAAAACACT  1141

seq1  GGCATTAATGAAGAATTC  1164
      ||||||||||||||||||
seq2  GGCATTAATGAAGAATTC  1159